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Tandem mass spectrometry

Mass spectrometry for analyses of


Post-translational modification
1.Tandem in space (空間性串聯)
2.Tandem in time (時間性串聯)

LID
TOF-TOF

Ion Trap Ion Trap


Radio frequency field is scanned
multiple collision-induced dissociation

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Protein Phosphorylation

Parent ion scan


(Precursor ion scan)

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Analysis of phosphorylated positions

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Protein glycosylation

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Glycoproteins

glycoform

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N-linked oligosaccharide core
Enzyme release

Oligomannose-type N-linked oligosaccharides


Hybrid and complex native N-linked oligosaccharides

O-linked oligosaccharide core O-linked oligosaccharide core


Hydrazine release

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Functions of glycoproteins

C3 convertase

Methods for analyses of glycan

bind to C8 and C9

Analyses of glycan by liquid chromatography

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N-linked oligosaccharide core O-linked oligosaccharide core

N-glycosidase F

2-AB labeling
HPLC

1. Normal phase HPLC (NP)


Glucose uint (dextran)

2. Reverse phase HPLC (RP)


Arabinose unit

3. Weak Anionic Exchanger (WAX)

1. Normal phase HPLC (NP)


Glucose uint (dextran)
2. Reverse phase HPLC (RP)
Arabinose unit
3. Weak Anionic Exchanger (WAX)

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1. Normal phase HPLC (NP)
Glucose uint (dextran)
2. Reverse phase HPLC (RP)
Arabinose unit
3. Weak Anionic Exchanger (WAX)

Enzyme array

2D electrophoresis and MALDI-TOF MS

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Glycoform ?

MALDI-TOF and glycoform


MALDI-TOF (matrix-assisted laser desorption/ionization time-of-flight)

N-glycosidase F

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Ion Trap

Tandem mass spectrometry (MSn)

Ion Trap

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Chemical modification

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