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In this paper, we describe how wireless technologies can be used to create a platform for animal health and behaviour monitoring. A steer is used as a case study, and is instrumented with both internal and external sensors. The sensors communicate wirelessly with each other, and are continuously connected over the mobile telephone network.
In this paper, we describe how wireless technologies can be used to create a platform for animal health and behaviour monitoring. A steer is used as a case study, and is instrumented with both internal and external sensors. The sensors communicate wirelessly with each other, and are continuously connected over the mobile telephone network.
In this paper, we describe how wireless technologies can be used to create a platform for animal health and behaviour monitoring. A steer is used as a case study, and is instrumented with both internal and external sensors. The sensors communicate wirelessly with each other, and are continuously connected over the mobile telephone network.
Mobile, wireless sensor networks are able to bring a new
level of monitoring into many industries. In this paper, we describe how wireless technologies can be used to create a platform for animal health and behaviour monitoring. A steer is used as a case study, and is instrumented with both internal and external sensors with a minimum amount of interference with the animal. Using matchbox sized motes placed inside standard drug release capsules, we have been able to monitor the intra-rumenal activity of the steer. The sensors communicate wirelessly with each other, and are continuously connected over the mobile telephone network to provide a real time view of the data, using standard web services, from anywhere on the Internet.
KEY WORDS Sensor network, wireless, GSM, GPRS. 1. Introduction The need for individual and herd-wide monitoring of livestock from a physical and physiological perspective arises from the nature of the difficulties involved with managing farms with large grazing areas. There has always been a need for livestock producers to be able to observe their animals as often as possible. Inattention to the wellbeing of the animals, whether it be a health or welfare issue can lead to reduced productivity and the death of valuable stock. Management concerns such as interactions between cows and bulls, or dams and their offspring are also of great concern to farmers. In addition, the farmer needs to always be aware of matters such as water in dams or rivers, the amount, nature and nutritive value of the pasture (i.e. the feed for the animals), the state of fences and potential stock rustling. Although this calls for complete farm-wide knowledge at all times, there is much useful information in the animals themselves. Unfortunately, it is often the case that the farmer has neither the time or resources at hand to see the animals
regularly, and even when he does, he may not be in a position to identify some of the more deep-rooted problems associated with the metabolic or reproductive state of the individuals. Unlike humans who can describe their situation to a doctor, the animal is usually unable to communicate symptoms to an observer. The development of a platform technology being described here-in, is integral to the future management of livestock in the more remote areas of the world, but will also find a place in intensive livestock enterprises such as dairies and feedlots. The ability to be informed of changes to the animals metabolic, behavioural or welfare status in real time, together with input from fixed sensors such as those describing food and water availability, will both reduce the current reliance on manpower, and improve the decision-making processes. A problem specific to livestock monitoring (compared to other forms of sensing currently used on farms or in intensive situations) is that animals are mobile. Communication links need to deal with mobility and be able to cover long distances. In addition, intra-rumenal sensors are subject to significant translation and rotation within the animal resulting in antenna design, power, and data interpretation issues. To investigate these issues we have chosen to instrument a steer using three MICA2 Berkeley Motes[1], a variety of sensors, and an Ultralite GPRS unit[2]. By creating a small wireless network, we are able to investigate the internal workings of the animal without significantly interfering with it. The purpose of this experiment was two-fold, to test the capabilities of motes and wireless sensor networks for animal health monitoring, as well as to provide a preliminary investigation into movement in a cows rumen. The rumen is considered to be the animals engine-room, and is able to tell us much about the animals health. One of the most important variables is internal temperature, and in this experiment we chose to measure temperature, a meaningful variable on the one hand, but also as a proof of concept on the other. Other health variables that are of interest to farmers and veterinarians include pressure, pH level, conductivity and other bio-measurements. This experiment allows us to gain a broad understanding of what is possible with current sensor network and mobile Kevin Mayer Faculty of Engineering & IT Australian National University Kevin.Mayer@anu.edu.au
Keith Ellis Livestock Industries CSIRO Keith.Ellis@csiro.au Ken Taylor ICT Centre CSIRO Ken.Taylor@csiro.au
CATTLE HEALTH MONITORING USING WIRELESS SENSOR NETWORKS
telephone technology, and what complications we may encounter when dealing with live animals. The next section briefly discusses other work in the area of animal monitoring with a particular emphasis on remote monitoring, and the use of wireless sensor networks. This is followed by the body of the paper where we discuss the experiments we conducted involving the instrumentation of a steer with a wireless sensor network. We conclude with a summary of our results and discussion of future work. 2. Related Work The most common methods of monitoring animal behaviour over long periods of time are collaring a subset of the animals with VHF beacons[3, 4], and visual investigation by humans from fly-overs or drive-pasts. The former method is severely limited due to not being very accurate and only providing location and herding information. The latter method is more comprehensive in that various parameters on the animal can be monitored and transmitted back to a base station. It is still very limited in that very little sophistication can be built into the collars or the network on a protocol level, and it requires either many base-stations to cover a large area, or regular drive throughs to collect the data. Analysis of large areas of land using satellite techniques is another common, yet expensive, monitoring method. The goal of our work is to develop a low cost technology that can be used to monitor a group of animals. Zebranet[5] is an attempt to do this on a herd of Zebra at the Mpala Research Centre in Kenya. Although concerned with monitoring a large number of animals in a huge area, Zebranet concentrates on the position and movement of the animals rather than internal health statistics. It is this feature in particular that we believe is most useful to farmers, as opposed to animal behaviourists. There is very little other research into novel platforms for animal monitoring, in particular from a health perspective that is beneficial to farmers. 3. Experiments These experiments relied heavily on the remote monitoring infrastructure[6, 7] developed at the CSIRO ICT Centre in Canberra. The Ultralite[2], the remote station, is a single-board computer consisting of an Atmel 128 processor, external EEPROM, and a Sony Ericsson GM47 GSM module. The actual experiments took place at CSIRO Livestock Industries McMaster Research Laboratory in Chiswick, near Armidale, New South Wales. The development of the system and its server and database was based in Canberra. Three experiments were conducted. Experiment 1 acquired some rumen temperature data, to test methods for mounting instrumentation on the animal, transmitting data and assessing its usefulness, Experiment 2 tested methods of transmitting rumen data from inside cattle without a cannula. Experiment 3 involved remote rumenal monitoring using a technique applicable to cattle without a cannula. 3.1. Experiment #1 - Internal Health Monitoring In the long term, farmers need to be able to monitor the health of their livestock in an autonomous fashion, without significantly disturbing the animals. One of the goals of this experiment was to remotely monitor the intra-rumenal temperature of a steer over a long period of time and see whether any particular patterns emerge. The experiment was conducted on a steer fitted with a cannula that provided access to his rumen. We configured an Ultralite[2] with an attached temperature probe to monitor the internal temperature and report it back to the database in Canberra every 10 minutes, or whenever it changed by 0.2C 1 . This program was written on top of the base mobile infrastructure libraries[8] on the Ultralite. The hardware was encased in a small package attached to a saddle on the animals rump, with the temperature probe wire leading through the cannula into the rumen digesta. The steers paddock was located on the outskirts of a country town, and on the border of a GSM black spot, so continuous coverage was not guaranteed, even with an external antenna connected to the mobile phone module. This led to frequent connections and disconnections from the network and consequent intermittent data availability. In future, buffering code will be introduced to prevent such data loss. Despite this, much data was obtained, giving an indication of the expected rumen functions such as fermentation of feedstuffs and the mixing of ingested water. As illustrated in Fig. 1, we witnessed a significant drop in temperature as the animal drank from the water trough. The local maximum shortly after the drop in temperature is thought to be a result of movement within the rumen mixing the colder water with the rest of the
1 Live information was presented by a web interface (and continues to be) available at http://mobile.act.cmis.csiro.au/database/template/cow.xml?xsl=cowpage.xsl Fig. 1. Intra-rumenal temperature of a steer over a 5 hour period.
rumens contents. We also noted that it takes upwards of 3 hours for the rumen to heat up to its equilibrium temperature. Although only a single variable, internal temperature is considered to be valuable information as it can be used as a basic health indicator and an aid in investigating: When drinking occurs. How much water is ingested at a particular drinking event. When the animal is ruminating, which acts as a proxy to measure food intake. What sort of mixing occurs in the rumen. How much heat is generated during fermentation of ingested feed. How cold water affects the animal on a warm day, and how warm water affects the animal on a cold day. The optimum distribution of water within a paddock to prevent overheating whilst still encouraging the animal to graze throughout the paddock. The effect different temperature and volumes of water have on the living organisms inside the rumen (when combined with measurements of micro-biota). This experiment demonstrates the possibility of remote health monitoring. It does not however provide a solution for large scale deployment due to its configuration relying on an animal with a cannula. 3.2. Experiment #2 Radio transmission through a cow The purpose of this experiment was to determine whether it would be feasible to use Berkeley Motes[1] as internal sensing devices, wirelessly relaying data to the outside of the animal. Although the approximate radio range of the motes in free air is known[1], it is difficult to model the radio behaviour in a non-standard environment, such as the rumen of a steer which contains a significant amount of water and masticated and fermenting grass and micro-biota in the digesta. The radio signal must also be able to penetrate the animal tissue and leather between the rumen and an external mote. An additional complexity is that the orientation and location of the antenna on the mote inside the rumen is unpredictable due to the churning activity of the stomach. This experiment was conducted in an ad-hoc manner using qualitative analysis. Two motes were used to test the radio signal; the mote to go inside the animal was programmed with the TinyOS[9] demonstration application CntToRfm. This application periodically broadcasts a message containing a uniformly incrementing integer. The second mote was programmed with the RfmToLeds application which lights up the LEDs on the mote to display a binary counter showing the value of the number in the last radio message received. No modifications were made to these programs, meaning the standard active messaging[10] and default MAC level protocols were used. The CntToRfm mote was placed inside a standard plastic barrel of a controlled release device[11] (CRD) shown in Fig. 2. The CRD pictured here with a MICA Mote partially inserted is a standard type of capsule that is usually dosed orally. It has built in wings which prevent it from being regurgitated. We attached fishing line in order to retrieve the capsule from the stomach after testing. Table 1. Empirical results of MICA radio transmission through a steer. Type of Mote Used Documented RF Range[1] (no obstructions) Experimental Results MICA Motes 35m None of the messages sent from the internal mote were received by the external mote. MICA2 Motes 916MHz 150m Some of the messages from the internal mote were received by the external mote. Messages appeared to be transmitted successfully for periods at a time, then no reception for a short period. Rather than random noise, this was likely due to movement of the capsule inside the rumen. When the capsule was at the top of the rumen, and physically closer to the second mote, most of the messages were received, but when the capsule moved further away, the messages stopped being received. Reorientation of the external antenna also improved the reception at some times, indicating that the CRD was indeed changing its orientation. MICA2 Motes 433MHz 300m Most of the messages from the internal motes were received. Again, there were periods when nearly all of the messages were received, and then periods when only a few odd messages were received probably as a result of movement of the capsule within the rumen.
Fig. 2, which is used routinely for medicating animals, and then inserted into the rumen via the cannula 2 . The second mote was held in a variety of positions on the outside of the animal, and visual observation was used to determine whether the LEDs were flashing in accordance with the counting application. The experiment was conducted with first generation MICA Motes, as well as with MICA2 Motes. Both the 916MHz and 433MHz radios were tested on the MICA2s. In each case, estimates of radio transmissibility were made from observations of the continuity of the LED sequence on the external mote. These results are presented in Table 1. The experiment indicated that radio transmission is significantly hindered by the transmission medium. Rotation of the capsule, and thus varying antenna orientation, was another likely source of non-reception of messages. This experiment suggested MICA2s with 433MHz radios would be satisfactory for communications from within the stomach of a steer to an external Mote. Additionally, there was the possibility of increasing the probability of successful data transmission by both MAC layer and antenna design improvements. 3.3. Experiment #3 Animal Health Monitoring This experiment used three MICA2 Motes with 433MHz radios, an MTS400 and an MTS420 sensor boards, and an Ultralite for long distance communication. The three motes were configured as follows: Mote 1 - Attached to an MTS400 Environmental Monitoring Board: Used to measures 2-axis acceleration and temperature. This mote is
2 The capsule was inserted through the cannula to facilitate easy insertion and retrieval of the device. placed inside a CRD and inserted into the steers rumen via a cannula. The sensors were sampled every 8 seconds and the readings transmitted to the base station mote. Mote 2 - Attached to an MTS420 Environmental Monitoring Board: Used to monitor GPS location, temperature, pressure, humidity and 2- axis acceleration. This mote captured data every 2 minutes and forwarded it to the base station. Mote 3 - The base-station mote, whose task it was to receive transmitted data from the other two motes and forward it on to the Ultralite via an MIB510 programming board and a serial cable. The Ultralite maintained a connection to the server in Canberra using GPRS[8] and transmit the sensor information in real time. Fig. 4 provides a graphical depiction of how the various pieces of hardware fit together on the animal. This proof of concept experiment ran over 36 hours and gave us the animals position during two afternoon/evening periods, a measure of external environmental conditions, and intermittent data from the internal sensors. The plot in Fig. 3 shows the GPS information transmitted from the external mote. Due to the high power consumption of GPS, the batteries on this mote lasted approximately 6 hours before they needed to be replaced. While larger batteries can be used it seems a GPS sensor is unsuitable for continuous monitoring of animal location in a production environment where the sensor needs to last years without servicing. Either relative position monitoring, or other methods of localisation[12, 13] using a small number of fixed beacons may be more suitable. The GPS data shows us where the steer prefers to roam. This data is useful for farmers in order to utilise their grazing land with maximum efficiency by distributing Smarty's Position -36.64 -36.62 -36.6 -36.58 -36.56 -36.54 -36.52 32.52 32.54 32.56 32.58 32.6 32.62 32.64 32.66 32.68 32.7 32.72 32.74 Longitude in Minutes (151' E) L a t i t u d e
i n
M i n u t e s
( 3 0 '
S ) Water trough Yard
Fig. 3. GPS Data over ~36 hours.
water troughs, trees and fodder appropriately. Alternatively, the farmer may want to utilise land that the animals never roam around in for other purposes. The intra-rumenal movement plot, together with the temperature plots in Fig. 5 shows that there was not a continuous connection between the internal mote and the database. The two critical communication links are between the internal mote and the base mote, and the GPRS connection between the Ultralite and the Internet. The mobile infrastructure[8] logs all Ultralite connections and disconnections. By correlating this data with the times of data availability, we determined that for much of the time the breakdown in communication occurred between the internal mote and the base mote. Although there were a significant number of connects and disconnects between the Ultralite to the backend system, connections tended to last for at least a few minutes each time longer than the sampling period of the internal mote. As one can see in Fig. 5, there are periods where data is received from the external mote and not the internal mote, again indicating a loss of communication between the internal mote and the base-station. An internal logging facility is being planned to buffer data during these periods of poor connectivity. The plots in Fig. 5 indicate that the internal temperature (two independent sensors were used for verification and redundancy) rises upon inserting the capsule into the animal as expected. It stabilises at the expected temperature of ~38C as is seen by ~1:00pm and there is an indication of a drinking even at around 4:30pm (which is correlated with the GPS location at that time together with the known location of the water trough). In the first experiment we demonstrated a relationship between the volume of water ingested and the change in rumen temperature. The drop in temperature shown in Fig. 5 being less than that shown in Fig. 1 is an indication that the animal drank less water. External temperature is also plotted in Fig. 5. Unfortunately, the plastic box housing the external temperature probe acted like a greenhouse on the animals back, causing this measurement to be higher than the actual outside temperature on the day. It is still interesting to note that the temperature did fall sharply very soon after the sun dropped over the horizon late in the afternoon. For similar reasons, the humidity and pressure readings from the external sensor were not particularly meaningful. Fig. 6 shows intra-rumenal movement using a dual-axis accelerometer and a sampling period of 8 seconds. Although there is an indication of very slow movement, we suspect that the sampling frequency is considerably slower than some of the frequency components of the digestive movement, so the data does not necessarily fully characterise rumenal movement. Physical observation also shows that even within the rumen digesta, one of the three stomachs, there is considerable difference in the rate of movement in different places, at different times in the animals feeding cycle, and with differing amounts of water in the rumen. Therefore further experimentation will be required to fully characterise rumen movement. Although not plotted, since no meaningful data was gathered, the accelerometers on the external mote could be used to provide a variety of valuable data. Firstly, by placing one axis of the accelerometer along the length of the animals neck, a grazing clock could be developed to monitor feeding behaviour, and similarly if strapped to a leg or on the rump, it could act as a pedometer to measure distance travelled. Alternatively, placed anywhere horizontally on a bull it could be used to identify a mating activity, which, when used in conjunction wit the positional identity of cow, could be used to subsequently indicate parentage. In this way, a farmer would have instant knowledge of mating and would bring him a step closer to being able to control breeding.
Fig. 4. Instrumentation of Smarty the steer.
4. Future Work There are a few avenues we consider are worth pursuing in this area, and each of them is discussed below. 4.1. Technical Improvements As witnessed in the third experiment, the radio transmission between the internal mote and the base node is not particularly reliable. The antennae used were standard wave dipole without any modification. We believe the transmission radius can be improved by using a dipole antenna. Different antenna shapes and configurations may also boost antenna output although there is limited possibility here due to the small size of the drug release capsule. A second area of potential technical improvement is the MAC layer protocol. An enhanced MAC layer with a suitable retry system would increase the probability of messages getting transmitted successfully. Additionally, we would like to implement internal logging on the motes so that when the mote is out of range of the base node, the measurements are buffered. There are also plans to implement buffering on the Ultralite in order to prevent loss of data when the animal wanders into a GSM black-spot. 4.2. Renewable Energy Physical observation shows movement within the rumen digesta to be similar to that of a washing machine. This movement could be used as a source of energy to power the internal Mote for the life of the animal. Further work is required to characterise this movement and assess methods of harvesting power from it. This work needs to include sampling at much higher frequencies than the acceleration sampling period of 8 seconds used in this experiment as higher frequency movements could be used as a source of energy[14]. Particularly when utilising GPS, power requirements of the electronics external to the animal are also a concern. Perhaps, a renewable energy source, such as solar, would be of most benefit as this allows for longer term autonomous operation. 4.3. Larger Scaled, Multi-homed Deployment The ultimate goal of creating an animal health monitoring system is to monitor a representative sample and ideally all the cattle on a farm, not just a single steer. We have a number of ideas of how to extend this experiment to monitor many cows without duplicating all the equipment on each steer. One idea is to have one animal with the equipment as per this experiment, and the rest of the animals with only an internal sensor. This would be suitable for animal instrumentation where we are concerned with internal health and biological parameters, and not their position or Internal Temperature 26 28 30 32 34 36 38 40 9/06/2004 11:20 9/06/2004 12:40 9/06/2004 14:00 9/06/2004 15:20 9/06/2004 16:40 9/06/2004 18:00 Time T e m p e r a t u r e
( d e g r e e s
C e l s i u s ) Intersema Temperature Probe Sensiron Temperature Probe External Mote Temperature
Fig. 5. Intra-rumenal temperature over an afternoon. Intra-Rumenal Acceleration & Movement -1000 -500 0 500 1000 1500 2000 9/06/2004 11:16 9/06/2004 11:31 9/06/2004 11:45 9/06/2004 12:00 9/06/2004 12:14 9/06/2004 12:28 9/06/2004 12:43 9/06/2004 12:57 9/06/2004 13:12 9/06/2004 13:26 Time m i l l i - g X Axis Acceleration Y Axis Acceleration
Fig. 6. Intra-rumenal movement over two ~30 minute periods.
other external measurements. For this to work though, one would require an improvement in radio transmission range to ensure the internal mote from one animal, can successfully transmit data to the external mote on another animal, potentially many metres away. Alternatively, each head of cattle have both an internal and an external mote. The internal mote would transmit measurements to the external mote, and the external mote would transmit the data on to the gateway animal, the one fitted with an Ultralite. Alternatively, rather than having a single animal with an Ultralite, acting as a gateway, one could instrument a small proportion of the animals as gateway nodes, and the rest as sensing only nodes. On another project we are developing soil moisture sensors with mote technology for communications and it is envisaged that in an instrumented farm there will also be many other networked sensors. The cattle operating within this network can be mobile nodes in that network. We could locate a number of fixed gateway nodes within this network and each animal in the herd would transmit its data, potentially using multi-hop, to the nearest gateway. 5. Conclusion In this paper we have described our ongoing work in animal monitoring using wireless technologies. There is a recognised need to provide farmers with relatively autonomous methods of monitoring the health of their herd, and learning about the behaviour of their animals in order to create a productive environment. Animals, unfortunately, are not always able to communicate health issues such as rumenal fermentation problems or varying micro-biota levels. Nor are farmers always able to discover (and possibly control) breeding patterns within herds. Visual monitoring of animals provides a very limited view of what is happening, and is rather inefficient as it cannot always be done 24/7. Autonomous monitoring is required to learn the things about the animals that visual inspection does not always tell us. This will enable new stock management techniques like varying stocking ratios based on animal behaviour rather than a visual assessment of pasture quality. By using the mobile telephone network for long distance communication, and a wireless sensor network for short distance communication, we have begun to create a platform which can be used for both external and internal monitoring of animals. Monitoring of vital health signs, eating and drinking habits, and location and movement in real time brings farmers and scientists a step closer to understanding animals better, and making farms more productive. Our initial experiments have shown that intra-rumenal monitoring can be done by enclosing probes a Berkeley MICA2 Mote with attached sensors in a drug control release capsule which can be dosed to the animal orally. This device can communicate wirelessly with a module on the animals back and together with external probes, can provide a comprehensive picture of the animals health and activities.
References
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