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Historical insight: The clonal selection theory of antibody formation has recently been subjected to challenge from many quarters. A review of its history and that of scientific theories in general points to the
importance of distinguishing between the central hypotheses of a theory and its subsidiary implications.
Like every theoretical statement ... the 1957 theory was made
in terms of contemporary knowledge ... [and is] incomplete ...
[and] expressed in terms that have now become meaningless.
F. M. Burnet (1967)1
The Clonal Selection Theory
(CST)2 of Macfarlane Burnet
and David Talmage seems to
be under fire currently from
several directions. Irun
Cohen3, in considering the
role of autoimmunity in the
economy of the body, suggested that, Progress in
immunology appears to have
rendered the clonal selection
paradigm incomplete, if not
obsolete; true it accounts for
the importance of clonal
activation, but it fails to
encompass, require, or
explain most of the subjects
being studies by immunologists today .... Polly
Sir Frank Macfarlane Burnet. (Courtesy of The
Matzinger4 has gone even
National Library of Medicine.)
further: based upon her view
that the danger theory has
negated Burnets classical view of self-nonself discrimination, she
extends this to suggest that the entire clonal selection paradigm that
has ruled immunology for some 35 years has been overthrown.
It is my contention that the difference between the central hypotheses of clonal selection (which comprise the core theory) and the subsidiary hypotheses (which address the various questions raised by the
theory) have been confused. I shall point out that ideas about tolerance
and self-nonself discrimination are not central to CST, but only stem
from its implications. Thus, there are different levels of hypothesis;
negation of a secondary hypothesis need not threaten the core theory5.
Even philosophers of science have occasionally blurred the important distinction between the core hypotheses of CST and the ancillary
hypotheses that may stem from it. In his book The Immune Self:
Theory or Metaphor?6, A. Tauber calls Burnets view of tolerance ...
a cornerstone of his later immune theory [CST], and throughout
appears to accept the various challenges to Burnets ideas on tolerance
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gen with preformed antibody, and of clonality (hypotheses iii and iv),
Talmage sent a draft of this paper to Burnet, who had already been
involving the cellular dynamics of proliferation and differentiation to
thinking along similar lines. Burnet had been associated with two earyield clones of cells and clones of their product. (Although T cells
lier theories of antibody formation, both expressed in instructionist
were not at the time even on the horizon, we may note in passing how
terms. The first theory17, in 1941, suggested that antigen induces the
reasonably well these hypotheses hold for T cells. Even many of the
formation of adaptive enzymes that would form a protein with a
subsidiary questions will be the same for both systems.)
unique specificity. Even this early, Burnet introduced the idea of the
Each of the core hypotheses raises questions that must ultimately
role of cellular dynamics in the immune response: the knowledge
be answered; speculation about each will involve the formulation of
induced by antigen would persist in all daughter cells that might
subsidiary hypotheses to be tested. Here follow some of the more
result from proliferation. As he put it, ... antibody production is a
obvious questions relating to the core hypotheses (and some contemfunction not only of the cells originally stimulated, but of their
porary answers).
descendants [my italics]. Here was the first hint that cell dynamics
Question (i)a: If a Landsteiner-size repertoire24 arises spontamight be important for antibody formation.
Burnets second theory18, in 1949, proposed that antigen instructs
neously, what is the mechanism for its generation? Subhypothesis
(i)a-1: Burnet suggested25, ... in some stage in early gestation a
the formation of an (RNA?) indirect template against which specificity might be imposed during protein formation. He emphasized again
genetic process for which there is no available precedent, that is, a
the role of cell dynamics in the
rapid somatic mutation. This was
process of antibody formation, but
taken up and expanded elegantly by
now he dealt with a further biologiJoshua Lederberg26, who spoke of
cal complication implied by the thethe rapid somatic mutation of an
d
e
a
f
b
c
ory. If any antigen could stimulate
immunoglobulin gene. This would
an antibody response, why not those
come to be known as the paucigene
Ag.C
native to the host? Peter Medawars
model27. Subhypothesis (i)a-2 (a
studies of tissue transplantation had
somewhat later arrival): Why not a
shown that allografts are rejected,
gene available de novo for each
but autografts are not19. Thus, some
specificity? This would come to be
c
known as the multigene (or
mechanism must exist to distinguish
c
germline) model28. Talmage would
self from nonself. But Ray
f
a
d
e
b
c
Owens demonstration that nonidenanticipate this side of the future
c
c
p
tical cattle twins, connected in
debate in his suggestion that the
c
c
utero, become red cell chimeras
total repertoire is limited, as any
p
c
p
p
unable to respond to one-anothers
Landsteinerian specificity may be
AB .C
antigens20 proved that self-recognidetermined by a unique combination of selected representatives from
tion must be learned rather than
a relatively modest repertoire of
genetically programmed. With the
antibodies29. (In the end, both
suggestion that such a learning
process is important and that it
germliners and somaticists would
30
occurs during fetal development,
Figure 1. Burnets illustration of the CST. Redrawn from F. M. Burnets be proved partly right .)
Burnet foreshadowed his future sinQuestion
(i)b:
If
a
repertoire is
The Clonal Selection Theory of Acquired Immunity, p. 59, Figure 7 (1959), with permission from Cambridge University Press.
gle-minded preoccupation with the
generated randomly and somatiquestion of self and nonself.
cally, why are destructive autoantibodies not formed against native antigens to engender immediate
autoimmune disease? Subhypothesis(i)b: Deserting his earlier
The clonal selection theory
self-marker explanation, Burnet assumed a special susceptibility
Burnet published his theory in, as he later put it with unaccustomed
of immature cells in utero, such that any antigen then present
modesty, ... an exceedingly obscure journal. If the concept proved
would abort that clonal precursor. Lederberg would extend this
to be important, he would have priority; if it were wrong, then ...
idea of a susceptible stage to cover the life of the individual31, as
very few people in England or America would see it21. It had developed from ... what might be called a clonal point of view. Its core
there is no reason why somatic mutation to expand the repertoire
hypotheses may be put succinctly22.
should be restricted to fetal life. (Note that nowhere in his initial
formulation does Burnet mention the terms self or self-nonself
(i) The entire immunological repertoire develops spontaneously in
discrimination.)
the host (that is, there is no information furnished by antigen).
Question (ii): Is there more than one type of receptor on a single
(ii) Each [antibody] pattern is the specific product of a cell and that
cell? Subhypothesis (ii): Burnets hypothesis of clonal deletion
product is presented on the cell surface (as an Ehrlich-type receptor).
(tolerance induction) implied the potential loss of desired specificities
(iii) Antigen reacts with any cells carrying its specific receptor to
if a cell produces many different receptors. Alternatively, the cell
signal cell proliferation and differentiation.
might produce undesired (autoimmune) antibodies when activated,
(iv) Some of these daughter cells differentiate (become plasmacywhat Burnet would term forbidden clones. Burnet thus suggested32
toid) to form clones of antibodies, whereas others survive as clones of
[undifferentiated] memory cells.
that a cell could have reactive sites corresponding to only ... one (or
This, then, is the CST. It was illustrated in its simplicity by Burnet
possibly a small number of) potential antigenic determinants. (Given
in his 1959 elaboration of the theory23, as in Fig. 1. It is a theory of
the above, and the diploid genome, the question of one cell-one antibody would engage the field for a time, see below.)
selection (hypotheses iiii), involving the selective interaction of antiK. R.
C OMMENTARY
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out that views on this subject cover the spectrum from true believers
to agnostics. A recent extended discussion of the topic revealed that at
least four groups think that self-nonself discrimination is not central
to the problem of immunoregulation and tolerance50.
In the end, however, we must not lose sight of the fact that the CST
is only a theory of how antibodies are formed, not a theory of why
they are formed.
16.
17.
18.
19.
Acknowledgments
I thank K. Schaffner for his helpful discussion of the structure of scientific theories and
N. Rose for useful suggestions.
24.
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