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1) Flagella
Numerous species of bacterial rods, spiral and few cocci are capable of
independent movement called motility. These movements are carried out by using
flagella (sing. flagellum) which are long filamentous whip like structures that push
bacteria. These flagella turn like a rotary engine to generate a propeller-like rotation
force which can reach up to 1500 rpm pushing the bacterial cells in to the aqueous
environments. Some species of bacteria like Proteus are surrounded with many
flagella that they show a wave like movement on solid culture medium, a pattern of
growth known as swarming growth.
Each flagellum is composed of three parts:
The filament.
The hook.
The basal body.
The filament is a hollow structure composed of long, rigid and helical strands
of a protein called falgellin. Flagella are anchored to the cell membrane where they
are attached to a hooklike structure that is connected to the basal body. The basal
body is a set of more than 20 different proteins that form a central rod and a set of
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enclosing rings. Gram-positive bacteria have one ring embedded in the cell wall and
another ring embedded in the cell membrane. The number and distribution of flagella
around bacterial cells vary by species and can be used asa method of their
differentiation.
o Monotrichous: bacterial cell has one flagellum at one end.
o Lophotrichous: bacterial cell has a group of flagella (more than one) at one
end.
o Amphitrichous: bacterial cell has a single or group of flagella at each end.
o Peritrichous: bacterial cell has many flagella at various locations all around
the cell.
Flagella are usually 10 to 20 m in length and are many times longer than the
diameter of the cell. They are usually 20 nm thick. Rotation of the flagella can be
clockwise (bacterial cells seems to run or move straight ahead in a short bursts) or
counterclockwise (bacterial cells seems to tumble or move randomly) movement of
flagella requires the cell to generate energy.
Flagella give bacteria the ability to move (the cell are called motile). Cells
usually move towards or away from a certain stimulus, which may be:
Chemical stimulus: nutrients or oxygen etc. (chemotaxis).
Light movement with regards to light is known as phototaxis.
Immune threat: in some diseases like cholera, the flagella help the
disease-causing bacteria to move through the tissue and escape
phagocytosis by white blood cells.
2) Axial filaments
Axial filaments or (endoflagella) are bundles of fibrils that arise beneath the
outer sheath and spiral around the cell. The contraction of these filaments leads to
spiral motion of the bacterial cell (common in spirochetes).
3) Pili and fimbriae
Pili (sing. pilus) are short, thin, hair-like fibers that protrude from the surface of
gram negative bacteria. Pili are shorter than flagella and they are formed of a protein
called pilin. Pili have a specialized proteins called adhesions located at their tips. The
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function of pili is to attach bacteria cells to specific surfaces, including animal tissues.
Consequently, pili help bacteria to colonize an area and cause disease. Another type of
pili is the conjugation pili, which is not used for attachment but rather is used in the
transfer of genetic material between cells. Conjugation pili are usually longer and
fewer in number around each bacterial cell than attachment pili. In the last few years
the microbiologists preferred using the term fimbriae (sing. Fimbria) for attachment
pili while keeping the term pili for the structures that function in transfer of genetic
material between cells.
4) Glycocalyx
Many bacteria secrete around themselves an adhering layer of polysaccharides
or polysaccharides and proteins known as glycocalyx. The layer can be thick and
tightly bound to the cell that it becomes known as capsule. When it is thin, loose and
less tightly bound it becomes known as slime layer. A slime layer is composed of a
mass of tangled fibers made of the polysaccharides dextran. When grown in solid
medium, encapsulated cells form smooth (S) colonies while non capsulated cells form
rough (R) colonies.
GENERAL MICROBIOLOGY
they escape phagocytosis by white blood cells. Similarly, only the encapsulated forms
of Bacillus anthracis cause anthrax (the capsule of B. anthracis is composed of Dglutamic acid).
II.
All bacteria except the mycoplasma have a cell wall. It is a complex semi-rigid
structure that surrounds the cell. The cell wall plays a critical role in the structure of
the bacterial cell by providing shape and protection. The cell wall gives the bacteria
its characteristic shape and protects the bacteria enhancing its survival. In addition, it
contributes to the ability of some bacteria to cause disease and consequently is the site
of action of several antibiotics. The composition of the cell wall is used to differentiate
major types of bacteria. Although some types of prokaryotes like algae, fungi and
plants have a cell wall; their cell walls differ in its chemical composition from
bacterial cell walls.
A major role of the cell wall is to prevent the cells from bursting (rupture)
because of internal pressure. Most bacteria live in an environment where there are
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more dissolved material inside the cell than outside. This hypertonic condition in the
cell means that water would diffuse inward and leads to an increase in internal
pressure of the cell. Without the cell wall, the cell would burst or undergo lysis.
Composition of the cell wall:
The bacterial cell wall consists of a network of chains of a complex substance
called peptidoglycan or murein. The peptidoglycan is composed of alternating units
of two amino containing sugars; N-acetylglucoseamine (NAG) and Nacetylmuramic acid (NAM) linked together by glycosidic bonds. The carbohydrate
backbone occurs in multiple layers connected vertically by side chains of four amino
acids and laterally by peptide cross bridges comprising one extremely large molecule.
There are two major types of the bacterial cell wall. Their difference provide a
means to identify stained bacteria as either gram-positive (blue-purple) or gramnegative (orange-red).
1) Gram-positive bacterial cell wall
About 60-90% of the cell wall of gram-positive bacteria is peptidoglycan with
thickness that can reach 25 nm. In addition to peptidoglycan, gram-positive cell walls
contain an anionic polysaccharide derivative called teichoic acid. Teichoic acid is
formed of sorbitol or glycerol linked by phosphor-diester bonds. Teichoic acid helps
link the peptidoglycan chains together. As teichoic acid is negatively charged (due to
the phosphate groups), it binds and regulates the movement of positively charged ions
(cataions).
When gram-positive bacteria grow in such way that they fail to synthesize a cell
wall, they produce cells known as protoplasts. Unless protoplasts are present in an
isotonic environment with the cytoplasm, they absorb water and then could be
ruptured.
2) Gram-negative bacterial cell wall
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Applications:
1) The cell wall is a preferred target for many antibiotics and
antimicrobials.
The cell wall is present in bacteria and not in human, therefore it is a target
for antibiotics and antimicrobials since they affect the bacterial cells without
affecting the host cells.
-
Characteristic
Peptidoglycan
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Gram-positive
Yes, thick layer
Gram-negative
Yes, thin layer
GENERAL MICROBIOLOGY
Teichoic acid
Outer membrane
Lipopolysaccharide
Porin proteins
Periplasmic region
Yes
No
No
No
No
No
Yes
Yes
Yes
Yes
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The cell membrane (also called cytoplasmic membrane) (usually called plasma
membrane in eukaryotes) is the boundary layer between the cell cytoplasm and the
cells external environment. It functions as a permeability barrier to keep cytoplasmic
constituents inside the cell and other substances outside.
The cell membrane of the bacterial cells is about 40% phospholipids and 60%
proteins. The phospholipids are arranged as a parallel layer known as the phospholipid
bilayer. Each phospholipid molecule consists of a polar head formed of a hydrophilic
(water soluble) phosphate group with glycerol and a non-polar hydrophobic (water
insoluble) tail composed of fatty acids. The polar heads lie to the outer side of the cell
membrane while the non-polar tails lie in the interior of the bilayer. The proteins are
embedded in the membrane where some are enzymes that function in cell wall
synthesis. Other are enzymes used in energy metabolism. Some proteins extend form
one end of the membrane to the other end and play an important role in transport of
nutrients across the membrane. The mosaic of proteins and phospholipids in the cell
membrane is dynamic and can move laterally in the membrane surface (fluid mosaic
model).
Main functions of the cell membrane
a- Selective permeability
The most important function of the cell membrane is that its acts a selective
barrier through which materials can enter and exit the cells. Large molecules as
proteins cannot pass, while small molecules such as amino acids, simple sugars,
nitrogenous bases can pass. Ions usually pass slowly while lipid soluble molecules
enter and exit more easily as the membrane consists mainly of phospholipids.
b- Production of energy
Some enzymes that are embedded in the cell membrane act as energy
metabolism enzymes that help break down the nutrients and produce ATP. This fact
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makes the membrane of the cell membrane similar to the inner mitochondrial
membrane of eukaryotes.
Passive diffusion
Substances move along a concentration gradient from an area of high
concentration to an area of low concentration without the consumption of energy
(ATP). Passive diffusion includes simple diffusion and facilitated diffusion.
Simple diffusion:
The movement of molecules or ions from an area of high concentration to an
area of low concentration across the cell membrane till there is an even distribution
(equilibrium) on both sides. Cells rely on simple diffusion for the transport of simple
molecules like oxygen and carbon dioxide.
Facilitated diffusion:
The movement of molecule from an area of high concentration to an area of low
concentration across the cell membrane took place with the help of a carrier. The
carrier is a protein that undergoes a conformational change that allows it to transport
the molecule from one side of the membrane to another. In some bacteria Glucose is
transported by facilitated diffusion in addition to fructose, urea and some vitamins.
Active process
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In active transport the cell uses energy to move substances from an area of low
concentration to an area of high concentration (against concentration gradient). Active
process includes active transport and group translocation.
Active transport:
The cells use energy in form of ATP to move substances from outside to inside
the cells. Usually there is a carrier for each transported substance or a group of closely
related substances. The molecule is transported exactly the same without any changes
in its structure. Among the substances transported by active transport are some sugars,
most amino acids and organic acids and a number of inorganic ions as sulfate,
phosphate, chloride, potassium and sodium.
Group translocation:
Group translocation is a process in which the substance to be transported is
chemically altered in the course of passage along the membrane and consequently, the
product appears inside the cell is chemically different from the external substrate. An
example is the transport of sugars as glucose, mannose and fructose, which are
phosphorylated during transport by phosphotransferase system (glucose and other
sugars are transported by facilitated diffusion in some bacteria and by group transport
in others).
Osmosis and the movement of solvent molecules (water transport)
Osmosis is the net movement of solvent molecules from an area of high solvent
concentration to an area of a low solvent concentration, across a selectively permeable
membrane, till equilibrium is achieved and an equal osmotic pressure is achieved in
both sides of the membrane. In living system the chief solvent is water and osmotic
pressure refers to the pressure required to prevent the movement of water (pure water
with no solutes) into a solution with some solutes.
A bacterial cell may be subjected to any type of three kinds of osmotic solutions
according to the concentration of solutes in the media.
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o In an
Isotonic solution.
Hypotonic solution.
Hypertonic solution.
isotonic (iso-osmotic), (iso=equal) solution, solute concentration is the
same in both sides of the cell membrane and water leaves and enter the cell at
the same rate.
o In a hypotonic (hypo-osmotic), (hypo=less) solution, the concentration of the
solute concentration outside the cell membrane is less than inside. Most bacteria
live in hypotonic solution and swelling due to movement of the solvent
molecules to the inside of the cell is contained by the cell wall. Cells with weak
cell wall may rupture and undergo osmotic lysis as a result of excessive solvent
intake.
o In a hypertonic (hyper-osmotic), (hyper= more), the concentration of the solute
in the medium is higher than inside the cell and water tend to go from inside the
cell to outside. If bacteria are placed in a hyper tonic solution they shrink and
collapse as water leaves the cell to the outside.
2) Cytoplasm
The cell membrane encloses the cytoplasm which is the foundation substance of
the cell and the center of its growth and metabolism. The cytoplasm is a thick
gelatinous semitransparent mass, which contains proteins, amino acids, sugars,
nucleotides, salts, vitamins and ions all dissolved in water. In addition, the cytoplasm
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later). Plasmids are very important tools in industrial microbiology and biotechnology
which both use genetic engineering.
c- Ribosomes
Ribosomes are responsible for protein biosynthesis. They are present in the
cytoplasm of bacterial cells and their number may reach tens of thousands in an
actively growing cell, thus giving the cytoplasm its granular appearance.
They are composed of RNA (ribosomal RNA or rRNA) and proteins (ribosomal
proteins). Ribosomes are present in all organisms (prokaryotes and eukaryotes),
however; prokaryotic ribosomes are smaller in size than eukaryotic ribosomes.
Bacterial ribosomes are 70S while eukaryotic ribosomes are 80S (where S is the
Svedberg unit which is the sedimentation coefficient when the ribosomes are
centrifuged it is related to the size of ribosomes).
The bacterial 70S ribosomes are composed of two subunits; the small subunit
(30S) and the large subunit (50S). During translation both subunits associate to form
the 70S ribosome. Each subunit is composed of ribosomal RNA and ribosomal
proteins. The small subunit is formed of one molecule of rRNA (16S) and more than
20 ribosomal proteins. The large subunit is formed of two molecules of rRNA (23S
and 5S) and over 30 ribosomal proteins.
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Application:
The bacterial ribosomes is an important target for antibiotics
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e- Gas vacuoles
Gas vacuoles are hollow cavities found in many aquatic bacteria like
Cyanobacteria and Halobacteria. These hollows cavities store gas in protein sacs. Gas
vacuoles are important for aquatic bacteria as they maintain its buoyancy and keep the
bacteria at a reasonable depth, so that they receive adequate amount of sunlight and
nutrients.
3) Endospores
Certain species of gram positive bacteria like Bacillus and Clostridium produce
highly resistant structures called endospores or simply spores.
Bacteria normally grow, mature and reproduce as vegetative cells, but when
conditions become hard as when nutrients like carbon, nitrogen or oxygen
become limited or other environmental pressure exist; spore are formed.
Endospores are very resistant to environmental conditions. By containing little
water, they are heat resistant and are one of the few very resistant structures
ever known. They are resistant to drying, heating, radiation and lethal
chemicals. For examples endospores can resist boiling for two hours whereas
vegetative cells die at 80C. Some spore can survive for years in 70% alcohol.
Spore formation begins when the bacterial chromosome replicates, a small
amount of cytoplasm gathers with it and the cell membrane grows in to seal off
the developing spore within the cytoplasm.
Thick layer of peptidoglycan are then formed and several coats of proteins
surround the spore. The vegetative cells disintegrate and the spore is released.
Endospores contain dipicolinic acid a unique organic substance that helps to
stabilize their protein and DNA.
Endospores may develop at the end of the cells, near the end or at the center of
the cell depending o the species.
When the environmental conditions are favorable for cell growth the protective
layers breakdown and the endospore germinate into vegetative cell.
Endospores represent a dormant form of life in bacteria; they are not a
reproductive process.
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Spores of Bacillus anthracis cause anthrax. The organism and the disease have
gained international attention in the last few years due to the potential use of the
spores in bioterrorism.
Structure
Flagella
Chemical
composition
Protein
Function
Comment
Motility
Protein
- Attachment to surfaces.
- Transfer of genetic material
-Buffer to environment.
-Cell protection.
-Attachment to surfaces.
-Contribute to disease (capsule)
Glycocalyx
Polysaccharides and
small protein
Cell wall
-Gram +ve:
Much peptidoglycan
With teichoic acid
-Gram ve:
Less peptidoglycan,
no teichoic acid in
outer membrane
Protein and
phospholipids
Cell membrane
Cytosol
- Cell protection.
-Shape determination.
-Prevent cell lysis.
-Cell boundary.
-Transport in/out.
-Site of enzymatic reactions
Ribosomes
Protein synthesis
Inclusion bodies
-Glycogen, sulfur
-Nutrients storage
Metachromatic
-Polyphosphate
-ATP production.
Magnetosomes
-Magnetite
-Cell orientation
Gas vacuoles
Chromosomes
-Air vacuoles
DNA
-Buoyancy
Site of genetic code and
inheritance
DNA
granules
Plasmid
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-Site of activity of
penicillin & lysozyme.
-Absent in Mycoplasma
-Gram ve release
endotoxin.
-Fluid mosaic model
-Susceptible to
detergent, alcohol and
some antibiotics.
-Semi transparent and
gel-like.
-Center of biochemistry
and growth.
Important target for
antibiotics
-Used as nutrients
during starvation.
-Found in diphtheria
-Helps locate preferred
habitat
-Located in the nucleoid
-Exists as single closed
loop.
-May contain R factors.
-Important in genetic
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engineering.
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