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A bacterial disease was reported from cultured loach Misgurnus anguillicaudatus in China. Symptoms
included haemorrhages at the body surface (including base of fin, head, mouth, and abdomen),
ulceration of muscle, and high-level mortalities. The dominant bacterial colonies were isolated in
nutrient agar from different infected body parts and confirmed the pathogenicity by challenge
experiments. The 3 strains (NQ1-3) were randomly selected and characterized phenotypically and
genotypically. Biochemically, the 3 strains showed properties and biochemical characteristics similar to
Vibrio cholerae. Phylogenetic analysis of the 16S rRNA gene (GenBank accession No. JF939043) and 3
housekeeping genes, RNA polymerase a-chain (rpoA, GenBank accession No. JF939042),
recombination repair protein (recA, GenBank accession No. JF939045) and DNA gyrase B subunit
(gyrB, GenBank accession No. JF909344) of strain (NQ1) exhibited high similarity to those of V.
cholerae from GenBank. The 3 strains (NQ1-3) were positive for toxR, lolB (previously called hemM) and
rtxA (presumptive cytotoxin) genes, potential virulence factors. To sum up, the isolated strains were
confirmed as V. cholerae on the basis of phenotypic characteristics, phylogenetic analysis of the 16S
rRNA gene and three housekeeping genes, as well as potential virulence factors studies. The
susceptibility of isolates to 28 antimicrobial agents was determined, NQ1 were found to be sensitive to
some of the drugs tested, including carbenicillin, azlocillin, cefoperazone, ceftazidime, ceftriaxone,
cephradine, azithromycin, lomefloxacin, levofloxacin, enoxacin, norfloxacin, neomycin, streptomycin,
doxycycline, tetraecycline, and minomycin.
Key words: Misgurnus anguillicaudatus, Vibrio cholerae, housekeeping genes, ulcer disease.
INTRODUCTION
Misgurnus anguillicaudatus of the order Cypriniformes is
a small freshwater teleost, it has been reared under
farming conditions in China since 1950s as a delicious
fish with high nutritional value and as traditional Chinese
medicine. M. anguillicaudatus was widely cultured in the
Jiangsu province of China, making a great profit on
economics in recent years. Owing to the intensive
culture, bacterial infectious diseases often occurred
between May and October each year and resulted in
Zhang et al.
2061
Phenotypic tests
The tested strains (NQ1-3) were subjected to the following
phenotypic tests: Gram stain, oxidase activity, cell morphology and
motility, oxidation/fermentation test, mannitol and sucrose, gas and
acid production from glucose, indole, methyl red, Voges-Proskauer
reaction, utilization of citrate, dihydrolation of arginine,
decarboxylation of lysine, nitrate reduction, and use of compounds
as unique carbon sources, salt tolerance tests (0, 1, 3 and 6%
NaCl), and growth on thiosulfate citrate bile salts sucrose (TCBS)
agar. Sensitivity to the Vibrio static agent O/129 (2, 4-diamino-6, 7diisopropylpteridine, 150 and 10 g per disc, respectively) was
determined.
Isolation of bacteria
The surface of diseased loach was sterilized with 70% ethanol.
Samples were collected aseptically from the liver, and muscle
tissues and streaked onto nutrient agar and blood agar plates, and
incubated at 28C for 24 h. After incubation, three morphologically
similar and dominant bacterial colonies (No.NQ1-3) were randomly
selected and inoculated onto nutrient agar slants, cultured for 24 h
at 28C, stored at 4C and subjected to Gram staining, motility,
physiological and biochemical tests for further identification.
Meanwhile, all the isolates were stored in nutrient broth
supplemented with 10% glycerol at -70C.
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min, annealing at 52C for 1 min and extension at 72C for 1 min. A
final extension step of 72C for 7 min was also used.
Universal PCR primers recA F (5-TGG ACG AGA ATA AAC AGA
AGG C-3) and recA R (5- CCG TTA TAG CTG TAC CAA GCG
CCC-3) were used for amplification of the recA gene (Thompson et
al., 2004). The thermal cycling protocol used included initial
denaturation at 95C for 5 min, followed by 30 cycles of
denaturation at 95C for 1 min, annealing at 55.5C for 30 s and
extension at 72C for 1 min. A final extension step of 72C for 7 min
was also used.
PCR products were purified using a DNA purification system
(Wizard PCR Preps, Promega) and sequenced by Biotechnology
Corporation, Shanghai, China. The 16S rRNA, rpoA, recA and gyrB
sequences determined were compared against other sequences
using the BLASTN search algorithm (National Center for
Biotechnology Information, NCBI) to determine the closest matching
sequences in GenBank and to infer possible phylogenetic
affiliations. These 16S rRNA, rpoA, recA and gyrB sequences (both
the determined and reference sequences) were aligned using
CLUSTAL X version 1.83 program (Thompson et al. 1997).
Interspecies/interstrain similarity for each gene was determined
using MEGA III software (Kumar et al., 2004). Phylogenetic trees
were constructed using the neighbour-joining method. Distance
matrices were calculated using Kimura's 2-parameter distances.
Robustness of topologies was assessed by the bootstrap method
with 1000 replicates. Final classification of 16S rRNA, rpoA, recA
and gyrB genes to a phylogenetic division or subdivision, was
based on combined results from the phylogenetic group
represented by the closest matching sequences in the GenBank
and phylogenetic tree analyses. In addition, the NQ1 16S rRNA
sequence was compared to sequences in the Ribosomal Database
Project using BLAST (Altschul et al., 1990) to confirm the genus
assignment of NQ1.
Detection of toxR, lolB and rtxA genes
Three genes were detected by a specific PCR assay using the
following primers: toxR-F (5-GTC TTC TGA CGC AAT CGT TG-3),
toxR-R (5-ATA CGA GTG GTT GCT GTC ATG-3) for toxR as
previously described (Rivera et al., 2001); rtxA-F (5-CTG AAT ATG
AGT GGG TGA CTT ACG-3), rtxA-R (5-GTG TAT TGT TCG ATA
TCC GCT ACG-3) for rtxA as previously described (Chow et al.,
2001); lolB-F (5-TGG GAG CAG CGT CCA TTG TG-3), lolB-R (5CAA TCA CAC CAA GTC ACT C-3) for lolB as previously described
(Lalitha et al., 2008).
RESULTS
Isolation of bacteria
Bacteriological cultures on nutrient agar and blood agar
from the liver and muscle of moribund loach yielded an
apparently pure culture. Three strains isolated from liver
and muscles were randomly selected, which were
numbered: NQ1-3.
Pathogenicity of isolates
Experimental infection reproduced the apparently
identical disease syndrome observed in the farms. All of
injected fish with representative strain (NQ1) died at 2 to
6
8
5 day post-injection, especially in the 10 to 10 CFU/ml
concentration; the strain (NQ1) caused 100% mortality of
experimental loach within two days. In the experiment, it
was found that an overwhelmingly dominant strain was
isolated from the livers and body ulcers of the moribund
fish. Thus results demonstrated that the isolates were the
causal agent of the episode of mortalities of loach. No
deaths or visible changes in the control groups were
observed, and no bacteria were isolated from these fish.
Phenotypic characteristics
The morphological characteristics of 3 isolated strains
(NQ1-NQ3) were identical, and shared the properties of
V. cholerae (Table 1). They were Gram-negative,
fermentative slightly curved rods with round-ends,
approximately 1.52.5 m long and 0.81.0 m wide,
which were motile by single polar flagella. Oxidase,
catalase, lysine decarboxylase, -galactosidase were
produced, but not arginine dihydrolase and H 2S. Nitrates
were reduced. The methyl red test and Voges Proskauer
reaction were positive. Sensitivity was demonstrated to
the vibriostatic agent, O/129 (150 and 10 g per disc,
respectively). The three strains tested grew at 28C
producing a translucent greyish-white lawn of moderate
growth on nutrient agar plates, and with a yellow lawn
(ferment sucrose) on thiosulphate citrate bile salt sucrose
agar (TCBS).
Multilocus sequence analysis
Several genes (16S rRNA, rpoA, recA and gyrB) have
been used to infer phylogenetic relationships. The length
and accession number of the 16S rRNA, rpoA, recA and
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Characteristics
Growth at 37C
Oxidase
Catalase
O-F test
Motility
NQ1-3
+
+
+
F
+
V. cholerae
+
+
+
F
+
gas production
Lactose
Maltose
Mannitol
Mannose
+
+
+
Characteristics
ONPG
Malonate utilization
Citrate utilization
Acetate utilization
Tartrate utilization
NQ1-3
+
+
+
+
V. cholerae
+
Mucate utilization
Phenylalanine deaminase
Trehalose
+
+
d
Raffinose
Fructose
Melibiose
Sucrose
Cellobiose
Arabinose
MR test
Arabitol
V-P test
Xylose
Glucosamine
Galactose
H2S production
Sorbitol
Nitrate reduction
Sorbose
-methyl-D-glucoside
Dulcitol
Indole
Erythritol
Arginine dihydrolase
Amygdatin
Lysine decarboxylase
L-Rhamnose
Growth at NaCl: 0
Oextrin
Inositol
3%
Adonitol
Salicin
O/129: 10 g
Esculin
150 g
Notes: +, positive; , negative; d, 11%-89% positive; , not described in references; F, fermentative; S, sensitive. *The data of V.cholerae come from
Bergeys Manual of Determinative Bacteriology (Holt et al., 1994), Bergeys Manual of Systematic Bacteriology (Brenner et al., 2008, second edition).
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Table 2. The length and accession number of the 16S rRNA, rpoA, recA and gyrB genes.
rpoA sequence
length
accession no.
916bp
JF939042
recA sequence
length
accession no.
849bp
JF939045
gyrB sequence
length
accession no.
1083bp
JF909344
Figure 1. The neighbor joining (NJ) phylogenetic tree based on the partial 16S rRNA gene sequences
(AB497067~ EF684902are database accession numbers in NCBI. Numbers in tree are bootstrap values).
including
carbenicillin,
azlocillin,
cefoperazone,
ceftazidime, ceftriaxone, cephradine, azithromycin,
lomefloxacin,
levofloxacin,
enoxacin,
norfloxacin,
neomycin,
streptomycin,
doxycyline,
tetracycline,
minomycin.
DISCUSSION
V. cholerae (O1 and O139) are important human
pathogens causing both gastroenteritis and cholera, nonO1/non-O139 V. cholerae strains were known to be
responsible only for sporadic cases of gastroenteritis and
for extraintestinal infections (Morris Jr, 1990), and well
recognized as pathogenic bacteria of aquatic animals
(Haldar et al., 2007; Muroga et al., 1979; Kiiyukia et al.,
1992; Reddacliff et al., 1993; Yang et al., 2006; Zheng,
1986). In our study, dominant bacterial colonies were
isolated from diseased loach, and the pathogenicity of
Zhang et al.
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Figure 2. The neighbor joining (NJ) phylogenetic tree based on the partial rpoA gene sequences
(AJ842567~EU652312 are database accession numbers in NCBI. Numbers in tree are bootstrap
values).
characteristics.
Comparison of the morphological and biochemical
characteristics of isolates (NQ1-NQ3) with V. cholerae,
showed that they shared a high proportion of identical
characteristics in classical tests. In addition, we further
conducted molecular identification, the 16S rRNA, rpoA,
recA and gyrB genes were used as the molecular
markers for bacterial species identification in this study.
The 16S rRNA sequence of isolate (NQ1) displayed very
high levels of sequence similarity (99%) to the 16S rRNA
gene of Vibrio spp. From GenBank, but it did not
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Figure 3. The neighbor joining (NJ) phylogenetic tree based on the partial recA gene sequences
(AJ842502~AJ842388 are database accession numbers in NCBI. Numbers in tree are bootstrap
values).
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Figure 4. The neighbor joining (NJ) phylogenetic tree based on the partial gyrB gene sequences (AJ842677~AJ842581 are
database accession numbers in NCBI. Numbers in tree are bootstrap values).
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Figure 5. Agarose gel electrophoresis of PCR products of lolB (lanes a to c), rtxA (lanes d to f) and toxR (lanes g to i). Lanes a, d and g,
NQ1; lanes b, e and h, NQ2; lanes c, f and i, NQ3; lanes M, molecular mass markers (DL 2000).
ACKNOWLEGEMENTS
This study was supported by the Projects of Shui Chan
San Xiang of Jiangsu Province (PJ2010-58), the Natural
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Table 3. Name and type of discs and antimicrobial sensitivity of pathogenic V. cholerae.
*
Sensitivity
R
R
S
R
S
R
Cephalosporins
Cefazolin
Cefoperazone
Ceftazidime
Ceftriaxone
Cephradine
30
30
30
30
30
I
S
S
S
S
Macrolides
Midecamycin
Azithromycin
Clarithromycin
Clindamycin
Erythromycin
30
15
15
2
15
I
S
R
R
R
Quinolones
Lomefloxacin
Levofloxacin
Enoxacin
Norfloxacin
10
5
10
10
S
S
S
S
Aminoglycosides
Gentamycin
Neomycin
Vancomycin
Streptomycin
120
30
30
10
I
S
I
S
Tetracyclines
Doxycyline
Tetraecycline
Minomycin
30
30
30
S
S
S
Sulfonamides
Trimethoprim/
Sulfamethoxazole
1.25/23.75
Groups
Penicillins
Chemicals
Penicillin G
Ampicillin
Carbenicillin
Oxacillin
Azlocillin
Amoxicillin
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