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Tautomerism in pyridazin-3(2H)-one: A
theoretical study using implicit/explicit
solvation models
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Journal of Molecular Graphics and Modelling 49 (2014) 4754
a r t i c l e i n f o a b s t r a c t
Article history: The tautomeric conversion of pyridazin-3(2H)-one 1 into pyridazin-3-ol 2 has been theoretically studied
Received 3 October 2013 using density functional theory (DFT) methods at the B3LYP/6-311++G** level. Two mechanisms have
Received in revised form been considered for this process: (i) one in which the hydrogen is directly transferred through TS12;
25 December 2013
and (ii) another one in which a double hydrogen transfer takes place via TS1122 upon formation of the
Accepted 20 January 2014
corresponding dimer. The former requires a very high activation energy of 42.64 kcal/mol as a conse-
Available online 28 January 2014
quence of the strain associated with the formation of the four-membered TS12, while the latter requires
a much lower activation energy, 14.66 kcal/mol. Implicit, explicit, and a combination of both implicit and
Keywords:
Tautomerism
explicit solvation models, using both protic and aprotic polar solvents, have been considered for the rst
Pyridazinone mechanism. This study allows the establishment of the requirement to use protic polar solvents in order
DFT calculations to reduce the high activation energy associated with TS12.
Solvent effects 2014 Elsevier Inc. All rights reserved.
Explicit and implicit solvation models
http://dx.doi.org/10.1016/j.jmgm.2014.01.006
1093-3263/ 2014 Elsevier Inc. All rights reserved.
48 S.R. Emamian et al. / Journal of Molecular Graphics and Modelling 49 (2014) 4754
H O OH
H X X
NH N
N N
Chart 1. Tautomerism.
2. Computational details
3. Results and discussion Solvent effects on tautomerism have been considered using
three computational models: (i) long range interactions between
3.1. Tautomerism in gas phase solute and solvent, modelled through the use of the SCRF method
(implicit solvation model) in the gas phase mechanisms A and B;
Two mechanisms, as sketched in Scheme 5, have been consid- (ii) short range interactions between solute and solvent molecules
ered for the tautomerism process in the gas phase; (i) one via a in the gas phase mechanism A, modelled by considering the explicit
direct hydrogen transfer process, mechanism A; and (ii) the other participation of one molecule of various polar protic and aprotic sol-
via an indirect (by dimerization) hydrogen transfer process, mech- vents. The explicit solvation model in mechanism B has not been
anism B. The total and relative electronic energies for reactants (R), considered; and (iii) a combination of both long and short range
TSs, and products (P) involved in the two mechanisms are displayed interactions is considered by using both implicit and explicit sol-
in Table 1. The geometries of the TSs associated with the two mech- vation models.
anisms, including corresponding imaginary frequencies, can also be
observed in Fig. 1. 3.2.1. Implicit solvent effects on tautomerism via the mechanisms
Tautomerization of pyridazinone 1 into pyridazol 2 is an A and B using the SCRF method
endothermic process of 8.66 kcal/mol; i.e. pyridazinone 1 is more In order to establish the implicit solvent effects on the kinetics
stable than pyridazol 2. At a glance, it seems that pyridazol 2 and thermodynamics of the tautomerization reaction, the gas
should be more stable than pyridazinone 1 due to its expected high phase stationary points involved in the mechanisms A and B were
aromatic character. The resonance stabilization energy (RSE) corre- optimized using the SCRF/PCM method for several polar solvents
sponding to pyridazinone 1 and pyridazol 2 can easily be evaluated of different dielectric constants. The total and relative electronic
using the isodesmic reactions presented in Scheme 6. energies for the species involved in both mechanisms are dsiplayed
50 S.R. Emamian et al. / Journal of Molecular Graphics and Modelling 49 (2014) 4754
Fig. 1. Optimized structures of TSs associated with mechanism of path A (left) and B (right) including the corresponding imaginary frequencies. R1 and R2 are given in A.
O O
NH NH
+ + E= 13.91 kcal/mol
N N
OH OH
N N
+ + E = 23.40 kcal/mol
N N
+ + E=37.08 kcal/mol
Scheme 6. Isodesmic reactions considered for the evaluation of RSE of pyridazinone 1 (top), pyridazol 2 (medium) and benzene (bottom) as reference. Isodesmic energies,
E, were calculated at the B3LYP/6-311++G** level.
Fig. 2. Graphic representation of pairwise steric exchange energy, dE = 8.77 kcal/mol, between the lone-pair electrons of the adjacent sp2 nitrogen atoms in pyridazol 2.
in Tables 2 and 3. In order to have a clear comparison, the gas phase affected by solvents, the energy changes along tautomerization
(vacuum) results are also included in the rst row of these tables. are very small among various solvents especially for those having
As can be seen, in comparison with the gas phase, even though the a dielectric constant at above 20. In mechanism A, both activation
electronic energies of the species involved in both mechanisms are and reaction energies are increased with increasing the medium
Table 1
Total electronic energy (E) for species involved in mechanism A and B including corresponding activation (E =/ ) and reaction (Er ) energies.
R TS P
Table 2
Total electronic energy (E) for species involved in mechanism A including corresponding activation (E =/ ) and reaction (Er ) energies in various media.
R TS P
Table 3
Total electronic energy (E) for species involved in mechanism A including corresponding activation (E =/ ) and reaction (Er ) energies in various media.
R TS P
Fig. 4. Some selected bond distances (R1 and R2 in ) between solvents and pyridazinone 1 in GS and in its corresponding TS. = (R1 in GS R1 in TS ) + (R2 in GS R2 in TS ).
signicant in the case of protic solvents so that the activation ener- we attempt to study the solvent polarity effect on the solvent-
gies are more reduced in the presence of these kinds of solvents. assisted tautomerization via mechanism A, described in section
3.2.2 by using the SCRF method. The total and relative electronic
3.2.3. Joint implicit/explicit solvent effects on tautomerism energies for the species involved in mechanism A explicitly
In this section, in order to consider both short and long range assisted by one molecule of various solvents using the SCRF/PCM
interactions between the solute and solvent on tautomerism, method are displayed in Table 5. As mentioned previously, the
S.R. Emamian et al. / Journal of Molecular Graphics and Modelling 49 (2014) 4754 53
Table 4
Total electronic energy (E) for species involved in mechanism B including corresponding activation (E =/ ) and reaction (Er ) energies in various media.
R TS P
Table 5
Total electronic energy (E) for species involved in mechanism A explicitly assisted by one molecule of various solvents using SCRF method including corresponding activation
(E =/ ) and reaction (Er ) energies.
R TS P
gas phase activation energy associated with tautomerism via B3LYP/6-311++G** level. In the gas phase two mechanisms for the
mechanism A is 42.64 kcal/mol. When only long range inter- hydrogen transfer have been investigated. Along mechanism A, the
actions are considered, in comparison with the gas phase, the hydrogen is directly transferred from the nitrogen to the oxygen
activation energy remains relatively unchanged in different sol- atom through the synchronous TS12, whereas along mechanism B
vent types (see Table 2); that is, long range interactions are of a a double hydrogen transfer via TS1122 takes place upon the for-
smaller importance. On the other hand, when just short range mation of the corresponding dimer. Mechanism A presents a very
interactions are taken into account, the activation energies are high activation energy of 42.64 kcal/mol as a consequence of the
considerably reduced in comparison with the gas phase as: acetone strain associated with the formation of the four membered TS12.
(41.14 kcal/mol) > THF (35.46 kcal/mol) > DMSO (28.43 kcal/mol) On the other hand, tautomerization via mechanism B presents a rel-
> water (19.01 kcal/mol) > methanol (18.11 kcal/mol) > formic atively low activation energy of 15.66 kcal/mol due to the absence
acid (9.59 kcal/mol) (see Table 4). This result clearly shows of strain at the eight-membered TS1122. Solvent effects on mecha-
that short range interactions, even in aprotic solvents, are nism A have been considered by using three computational models.
more important than long range interactions. Finally, when In the rst model, the implicit solvation of protic and aprotic polar
implicit/explicit solvent effects are considered, the activa- solvents has been considered using the SCRF/PCM method. In the
tion energies are reduced, following the same trend than that second model, the gas phase optimizations including one molecule
observed for short range interactions, emphasizing again, the of protic and aprotic polar solvents were performed in order to
importance of explicit solute/solvent interactions on the reduc- establish explicit solvent effects. Finally, in the third model, implicit
tion of the activation energies: acetone (34.47 kcal/mol) > THF and explicit solvent effects were studied by combining the rst two
(31.43 kcal/mol) > DMSO (24.65 kcal/mol) > water (19.28 kcal/mol) approaches. By this comparative study it is possible to conclude that
> methanol (18.53 kcal/mol) > formic acid (8.18 kcal/mol) (see while the implicit solvent effects of polar solvents do not substan-
Table 5). tially modify the gas phase energies found along mechanism A, the
These results can be understood considering two kinds of explicit inclusion of one solvent molecule favours the reaction to
behaviour of the tautomerization of pyridazinone 1 via mechanism take place via a less strained TS. In this way, protic polar solvents are
A: (i) the high activation energy found in the tautomerization of very efcient since their acid/base character allows the hydrogen to
pyridazinone 1 into pyridazol 2, via TS12, is mainly a consequence be transferred via a six or higher membered TSs. Finally, the similar
of the strain associated with the formation of four-membered TS of polarity of reagent and TS involved in the non-solvent assisted pro-
the intramolecular hydrogen transfer process. Any acid/base sol- cess, which produces a closer solvation of these species, accounts
vent molecule capable to perform this hydrogen transfer via a less for the low solvent effects found along the SCRF calculations.
strained process can markedly favour the tautomerization pro-
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