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Ovchinnikov / Chemistry Journal (2013), Vol. 02, Issue 02, pp.

59-65 ISSN 2049-954X

Research Paper

Thermochemistry of Heteroatomic Compounds: Some


Thermodynamic Aspects of Combustion and Formation
of Carbohydrates of Different Structures
Vitaly Ovchinnikov

Tupolev Kazan National Researching Technical University, St-K, Marks 10, 420111 Kazan, Tatarstan /Russia
E-Mail: chem_vvo@mail.ru

Abstract
The linear equation of a general view Y = i f (N - g), where Y can be a free energy or heat of combustion orformation,
entropy and the heat of capacity, parameters, i and f are correlation factors, describing the interdependence between
thermodynamic functions of sugars and their numbers (N) of valence electrons except the numbers of lone electron pairs (g)
of heteroatoms in them, has been applied for calculation of sugars of a various structure. The obtained results can be used
for an estimation of the energy transfer in living systems by the means of phosphorus containing sugars like adenosine-
triphosphate (ATP).

Keywords: Sugar, Carbohydrate, Combustion, Formation, Free Energy, Heat, Entropy, Heat Capacity

1. Introduction
The interest of biochemists to the definition and analysis of esponds to Eq. 1 in general (Cox & Pilcher, 1970)
thermodynamic functions of carbohydrates a various struc-
ture does not weaken during many tens years till this time aHbNcOdPVe + nO2 aCO2 + b/2 H2O + d/2 N2+ eH3PO4 + Y..1
(Corbridge, 1980 and Haynie, 2008). It is established, that
metabolism processes of carbohydrates are carried out via Where a, b, c, d, e are stoichiometric coefficients, and Y is a change of
the formation of phosphorus-containing esters. The signif- functions: the free energy, enthalpy or entropy at the standard conditions
icance of phosphorus-containing sugars in biochemical
processes it is possible to explain from the energetic and Earlier it has been shown (Kharasch & Sher, 1925;
structural positions (Stepanenko, 1977). Nucleoside-dipho- Ovchinnikov, 2006; 2011 and 2012) that the magnitudes of
sphosugars (NDFS) are good donors of the sugar rests the heats of combustion for organic compounds (co) can
from the thermodynamic points of view. According to be calculated effectively within the limits of the one-
Kochetkov and co-authors (Kochetkov et al, 1967) the factorial regression analysis i.e. at the construction of a
hydrogen bonds formation inside NDFS leads to the twist various correlation equations between the values obtained
conformation, which promotes its interaction with enzyme earlier experimentally heats of combustion of compounds
and help to conduct biochemical reaction. Taking into and a number of participating in them bond-forming,
account the presented results only it is possible to make valence electrons (Eq. 2):
some analysis of the thermochemical properties of sugars
of the different structure. co = i f (N - g)...2

Where parameters i and f are a correlation factors. They characterize


2. Results and Discussion structurally-thermal contributions in the heats of combustion and
"sensitivity" of valence electrons N in molecule, from which the number
The combustion process of heteroatomic compounds corr- (g) lone pair electrons of heteroatoms in a various functional groups is

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Ovchinnikov / Chemistry Journal (2013), Vol. 02, Issue 02, pp. 59-65 ISSN 2049-954X

subtracted. So, for elements of IVA group of Periodic table g is 0, for VA fGo=(-303.920.8)-(25.60.6)(N-g); r 0.999, So 15.3, n5 (I-V)............5
groups g is 1, for VI group g is 2 (Ovchinnikov, 2012)
fGo=(-807.36.2)-(39.60.3)(N-g); r 0.999, So 2.5, n5 (XIII-XIX)6
Similarly Eq. 3 can be presented for the characteristic of
other thermodynamic functions, such as the free energy of
2.2. The Heats of Combustion and Formation
combustion and formation, entropy and heat capacity
The heats of combustion (co) and formation (fo)
Y = i f (N - g).3 values for compounds (I-XII) are known in the literature
(Karrer & Floroni, 1923; Clarke & Stegeman, 1939;
2.1. Free Energies of Combustion and Formation Skuratov et al, 1957; Ponomarev & Migarskaya, 1960;
Desai & Wilhoit, 1970; Gerasimov et al, 1985; Wu et al,
The values of the free energy of combustion (cGo) and 1987 and Gubareva et al, 1991). Their thermochemical
formation (fGo) in the condensed phase carbohydrates parameters directly depend on the number of valence
such as -D-galactose -I, -D-glucose -II, -D-lactose -III, electrons as shown (Eqs. 7 and 8):
-D-saccharose -IV, -D-fructose -V for a long time are
known in the literature (Metzler et al, 2001). co = (23.56.0)-(118.10.2) (N-g); r 0.999, So 7.1, n12 (I-XII)......7

The equation (4) has been calculated with the use of all fo = (-264.421.7)-(40.90.8) (N-g); r 0.998, So 25.7, n12 (I-XII)..8
results in mentioned monography values of the free
energies of non-phosphoric and phosphor-containing carb- The heats of combustion of all phosphorus-containing
ohydrates (Table 1a, b, column 3, compounds I-V, XIII- carbohydrates (XIII-XXVIII) have been calculated with
XIX without of brackets). the use of dependence (Eq. 7). The contribution acidic
groups (-75.3 kJmol-1) has been considered at
cGo = (24.715.0)-(121.40.5) (N-g); r 0.999, So 17.0, n 12....4 calculation of values co.

The dependence (Eq. 4) was used for calculation of the The heats of formation of phosphorus carbohydrates have
free energy combustion of non-phosphorus carbohydrates been calculated with the combination of equations (1, 8,
(D-ribose -VI, D-arabinose -VII, -D-xylofuranose -VIII, and 9). The values of fH for gaseous CO2, liquid H2O
xylose -IX, D-sorbose -X, D-mannose -XI and D-gulose - and solid H3PO4 (-393.5, 285.8, -1279.0 kJ mol-1 correspo-
XII) and important phosphorylated sugars such as methyl- ndingly) were taken from the higher mentioned Cox &
-D-glycopyranoside-4,6-cyclophosphate -XX, methyl-- Pilchers (1970) monography.
D-ribofuranoside-3,5-cyclo-phosphate[-pXXI,pmethyl--
D-glycopyranoside-2,4-cyclophosphate -XXII, dimethyl- co = foproducts - foreagents..9
-D- glycopyranoside -3,5- cyclophosphatep-pXXIII, p1-
It is necessary to add, that the heats of combustion and
adenine-ribofuranoside-3,5-cyclophosphatep-XXIV, p1-
formation for the carbohydrates, containing the phosphate
adenine-ribofuranoside-2,3-cyclophosphatep-pXXV, p1-
cycles and adenine fragments (XX-XXVIII), were calcula-
adenine-ribofuranoside-5-phosphate (AMP) -XXVI, 1-ad-
ted previously (Ovchinnikov & Lapteva, 2011). The values
enine-ribofuranoside-5-diphosphate (ADP) p-pXXVIIpan-
for the same parameters calculated in this work good
dp1-adenine-ribofuranoside-5-triphosphate (ATP)-XXVIII
correspond to the mentioned earlier in the frames of
(Table 1a, c, the magnitudes in brackets).
uncertainties (0.5 %) for calculations.
It is necessary to add, that in Metzlers monography these 2.3. Entropy and Heat of Capacity
are values of cGo and fGo for six phosphor-containing
carbohydrates. They are erithrose-4-phosphate-XIII, ribose It was assumed that all thermodynamic data on entropy
-5-phosphate-XIV, fructose-6-phosphate-XV, fructose-1,6- (So) and heat capacity (Cp) of carbohydrates, (Miller,
diphosphate-XVI, sedoheptulose-7-phosphate-XVII, sedo- 1935; Jack & Stegeman, 1941; Kawaizumi et al, 1981;
heptulose-1,7-diphosphate-XVIII and -D-glycose-6-phos- Domalski & Hearing, 1990; Boerio-Goates, 1991 and
phate-XIX (Table 1b). Putnam & Boerio-Goates, 1993). These data could be exa-
mined in the frame work the given above approach: the
The Eq.5 includes five values for the free energies of interrelation of the chosen thermodynamic function with
formation (fGo) of sugars (I-V). The essential contributi- the number of valence electrons in heteroatomic molecule
on in general energy of the intramolecular hydrogen bonds Eq. 3).
from the acidic phosphorylic groups in carbohydrates
(XIII-XIX) does not allow to include these compounds in The equations (10 and 11) reflect the dependences of
general correlation. They form the separate dependence (6) entropy and heat capacity from number valence electrons;
with the excellent correlation coefficient: they have been calculated similarly:

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Ovchinnikov / Chemistry Journal (2013), Vol. 02, Issue 02, pp. 59-65 ISSN 2049-954X

Table 1a. Thermodynamic Functions (kJ mol-1, J mol-1 K-1) of Carbohydrates at 298.15 K; all Compounds are in The Condensed Phase

No Compound, -cGo (calc. -fGo (calc. -co (calc. -fo (calc. So (calc.
Cp (calc. 0.5%)
Comp. Formula, (N-g) 0.5%) 0.5%) 0.5%) 0.5%) 0.5%)
1 2 3 4 5 6 7 8
Sugars

I 2865.9 923.5 2804.5 1271.5 205.4 217.0


6126 , 24

II 2872.2 917.2 2803.3 1272.8 209.2 219.2

6126, 24

(395.7
III 5826.5 1515.2 5652.1 2214.2 417.6
2.0)
122211, 48

5643.4 2221.2
IV 5789.9 1551.8 392.4 424.3

122211, 48

(201.3
V 2874.1 915.4 2810.4 1265.6 208.0
1.0)
6126, 24

(2403.3 (168.9
VI (815.9 4.1) 2347.6 1049.1 187.0
12.0) 0.8)
C5H10O5, 20

(2403.3 (168.9
VII (815.9 4.1) 2338.8 1057.9 184.0
12.0) 0.8)
C5H10O5, 20

(2403.3 (168.9
VIII (815.9 4.1) 2340.0 1057.8 -
12.0) 0.8)
C5H10O5, 20

So = (6.925.4)+(8.10.8) (N-g); r 0.984, So 19.3, n5 (I,II,IV,IX,X).10 heat capacity for sugars (III, VI, XI, XII) and not
applicable for calculation for sugars including phosphorus
Cp = (15.25.1)+(8.40.2) (N-g); r 0.998, So 5.7, n10 (I-VII, IX-XI)....11 -atom.
The interdependence between entropy and heat capacity The other way for definition of the same function is known
values is available too as shown in Eq. 12. as Gibbss equation (13). Last dependence can be used for
So = (14.14.2) + (0.90.1) Cp; r 0.999, So 2.6, n 4 (I, II, IV, X)..12 phosphorus carbohydrates (XIII-XXVIII).

The equations (10 and 11) allow to calculate entropy and cGo = co-* So.......13

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Ovchinnikov / Chemistry Journal (2013), Vol. 02, Issue 02, pp. 59-65 ISSN 2049-954X

Table 1b. Thermodynamic Functions (kJ mol-1, J mol-1 K-1) of Carbohydrates at 298.15 K; all Compounds are in The Condensed Phase

1 2 3 4 5 6 7 8

(2403.3 (815.9
IX 2345.3 1051.4 143.5 184.0
12.0) 4.1)
C5H10O5, 20

(2889.5 (918.3
X 2799.1 1276.9 220.9 228.6
14.4) 4.6)
6126, 24

(2889.5 (918.3 (201.3


XI 2812.7 1263.4 214.2
14.4) 4.6) 1.0)
6126, 24

(2888.9 (918.3 (201.3


XII 2820.4 1255.7 -
14.4) 4.6) 1.0)
6126, 24
O|P
O|

|
|
H
O

O
H
2

( ) (1940.9 (1769.6 (10.7


XIII 1944.1 1439.1 -
9.7) 8.8) 0.05)
C4H9O7P, 16
Phosphor-Containing Sugars
O|

O|
H
|

O|
|P
H

O
O
H
|O
|

(2413.2 (1976.7 (5.7


2

( )
H
H
O

XIV 2414.9 1599.9 -


12.0) 9.9) 0.03)
5118P, 20
O|

O|
H
|

O|
H
O

|P
O
O
H
|O

(2885.5 (2183.7 (8.7


|

( )
H
H
O

XV 2888.1 1758.3 -
14.4) 10.9) 0.04)
6139P, 24
O|P2

O|

O|
H
|O

O|
H
O

|P

( )
(2960.8 (3530.4 (-195.5
O
O
H
|O
|

( )
XVI 2902.5 2600.8 -
H
H
O

14.8) 17.6) 1.0)


61412P2, 24
O|
O|

|P
|-
H
O

O
O
H
- H
C|O
H

( ) ( )
4

(3357.8 (2390.8 (22.8


XVII 3364.6 1913.3 -
16.8) 11.9) 0.1)
C7H15O10P, 28
O|P2

O|
O|
|O

|P
|-
H
O

O
O
H
- H
C|O
H

( ) ( ) ( )
4

(3433.1 (3308.7 (-181.4


XVIII 3379.0 2755.8 -
17.2) 16.5) 0.9)
C7H16O13P2, 28
O| P O
|
O H
H
O

_ ( )
2
O

_
H
O

_ _ (2885.5 (2183.7 (1.7


XIX 2886.0 1760.3 -
14.4) 14.4) 0.01)
C
H
H
O

6139P, 24
O OMe
O
O P OH
(3617.3 (1995.1 (3594.0 (1868.8 (78.1
XX O -
HO 18.1) 10.0) 18.0) 9.3) 0.4)
OH
7138P, 30

The analysis of entropic data for phosphor-containing unds there is a relatively big number of internal freedom
carbohydrates allows tomake some conclusion. A small degrees. The greater negative So values for compounds
positive magnitude of So values (compounds XIII-XVII, (XVIII and XXVIII) correspond to the presence of strong
XIX-XXVII) can characterize the fact that in these compo- hydrogen bonds, as shown by work of Kochetkov and co-

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Ovchinnikov / Chemistry Journal (2013), Vol. 02, Issue 02, pp. 59-65 ISSN 2049-954X

Table 1c. Thermodynamic Functions (kJ mol-1, J mol-1 K-1) of Carbohydrates at 298.15 K; all Compounds are in The Condensed Phase

HO

O
M
e
O
O
(3617.3 (1995.1 (3594.0 (1868.8 (78.1
XXI -
/

O P
O OH
18.1) 10.0) 18.0) 9.3) 0.4)
HO
7138P, 30
OH
O OH
OMe
(3617.3 (1995.1 (3594.0 (1868.8 (78.1
O O -
XXII 18.1) 10.0) 18.0) 9.3) 0.4)
P
HO O
C7H13O8P, 30
HO
O
O
P
O (4831.3 (2391.3 (4774.7 (1760.9 (189.8
HO O -
XXIII O
Me2 24.1) 11.9) 23.9) 8.8) 0.9)
O
C9H15O8P, 40

O O Ade
O (5955.4 (544.9
P (6045.3 (2787.3 (301.5
XXIV HO O 29.8) 2.7) -
OH 30.2) 13.9) 1.5)
1012N56P, 50
HO O Ade

(5930.3 (570.0
O O (6045.3 (2787.3 (385.7
XXV 29.6) 2.8) -
P 30.2) 13.9) 1.9)
O OH
1012N56P, 50
O
( HO)2P O O Ade (5955.4 (544.9
(6045.3 (2787.3 (301.5
XXVI 29.8) 2.7) -
30.2) 13.9) 1.5)
HO OH
1014N57P, 50
O|
|P

|
| |
[

O
H
O

_
(6030.7 (1748.7
1

( ) O O Ade
P
2 n= (6045.3 (2787.3 (49.0
XXVII HO 30.1) 8.7) -
HO OH
30.2) 13.9) 0.2)
1015N510P2, 50
O|
|[

|
| |
]

O
H
O
P
O

_ O
( ) P O Ade (6106.0 (2666.6
2 n= 2 (6045.3 (2787.3 (-203.6
XXVIII HO 30.5) 13.3) -
HO OH
30.2) 13.9) 1.0)
1016N513P3, 50

workers (Kochetkov et al, 1967). glucose-6-phospate (XIX) and 1-adenine-ribofuranoside-5-


diphophate (XXVII, ADP) in standard conditions (White
2.4. The Application of P-Sugars for Energy Transmissi- et al, 1981).
on
(II) +ATP(XXVIII) (XIX)+ADP(XXVII) + ro ...14
The obtained thermodynamic data can be possible use for
the calculation of the heat of reaction (ro) between the Let this reaction takes place in the absence of catalysis by
compressed glucose (II) and 1-adenine-ribofuranoside-5- hexokinase-enzyme as it is known for alive organisms. The
triphosphate (XXVII, ATP) (Eq. 14) for reception D- free energy of this process it is possible to calculate by the

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Ovchinnikov / Chemistry Journal (2013), Vol. 02, Issue 02, pp. 59-65 ISSN 2049-954X

Eq. 15. The heat of this reaction it is possible to calculate Domalski, E.S., and Hearing, E.D. (1990) Heat Capacities
by the Eq. 16. The entropy of this interaction it is possible and Entropies of Organic Compounds in the Condensed
to calculate with the use of Eq. 17. Phase. Volume II. J. Phys. Chem. Ref. Data, 19(4), pp.
881-1047.
rGo = = fGoproducts - fGoreagents.15
Gerasimov, P.A., Blokh, E.L., and Gubareva, A.I. (1985)
ro = foproducts - foreagents ...16 Standard heats of formation of intermediates in the synthe-
sis of vitamin C. Izv. Vyssh. Uchebn. Zaved., Khim.
rSo = Soproducts - Soreagents ......17 Khim. Tekhnol., 28, pp. 54-56.

The calculated values obtained are rGo = -843, ro = +7, Gubareva, A., Kunderenko, V.M., and Gerasimov, P.A.
rSo = +45 kJ mol-1 and J mol-1 K-1 correspondingly. Reac- (1991) Enthalpy of combustion and formation of d-ribose
tion can be carried out under the control of free energy. and d-ribono--lactone. Izv. Vyssh. Uchebn. Zaved.,
However it is necessary to remember, that the values used Khim. Khim. Tekhnol., 34, pp. 41-45.
at calculation have been calculated approximately and
have the significant uncertainty. Haynie, D.T. (2008) Biological Thermodynamics. 2nd ed.
Cambridge University Press.
3. Conclusion
Jack, G.W., and Stegeman, G. (1941) The heat capacities
We have shown the application of the equation Y = i f
and entropies of two monosaccharides. J. Am. Chem.
(N - g) for the calculation of the free energy, of the heat of Soc., 63(8), pp. 2121-2123.
combustion and formation, of entropy and heat capacity
for the big row of known sugars with a numbers valence Karrer, P., and Floroni, W. (1923) Polysaccharide XIX.
electrons N, from which the numbers of lone electron pair Die Verbrennungswarmen de kohlenhydrate. Helv. Chim.
g are excluded. The calculated equations give a possibility Acta, 6, pp. 396-401.
to calculate the same thermodynamic parameters for phos-
phor-containing carbohydrates with the important bioche- Kawaizumi, F., Nishio, N., Nomura, H., and Miyahara, Y.
mical function. The presented results can be used for an (1981) Heat-capacity measurements of aqueous solutions
estimation of the energy transfer in living systems by the of mono-, di-, and tri-saccharides using an isoperibol twin
means of P-sugars like adenosine-triphosphate (ATP) too. calorimeter. J. Chem. Thermodynam., 13, pp. 89-98.

Kharasch, M.S., and Sher, B. (1925) The electronic conce-


Acknowledgement ption of valence and heats of combustion of organic comp-
ounds. J. Phys. Chem., 29(6), pp. 625-658.
References
Kochetkov, N.K., Bochrov, A.F., Dmitriev, B.A., Usov,
Boerio-Goates, J. (1991) Heat-capacity measurements and A.I., Chilsov, O.S., and Schibaev, V.N. (1967) Chemistry
thermodynamic functions of crystalline -D-glucose at of Carbohydrates. Moskow, Chemistry.
temperatures from 10K to 340K. J. Chem. Thermodyn-
am., 23, pp. 403-409. Metzler, D.E., Metzler, C.M., and Sauke, D.J. (2001)
Biochemistry: The Chemical Reactions of Living Cells.
Clarke, T.H., and Stegeman, G. (1939) Heats of combusti- 2nd ed. Academic Press.
on of some mono- and disaccharides. J. Am. Chem. Soc.,
61(7), pp. 1726-1730. Miller, P. (1935) The free energy of furfural and some of
its derivatives. Iowa State Coll. J. Sci., 10, pp. 91-93.
Corbridge, D.E.C. (1980) Phosphorus. An Outline of its
Chemistry, Biochemistry and Technology. 2nd ed. Ovchinnikov, V.V. (2006) Thermochemistry of Heteroato-
Amsterdam-Oxford-New York, Elsevier Scientific Publis- mic Compounds: Enthalpies of Combustion and Formation
hing Company. of Organic Derivatives of P, As, Sb and Bi. Doklady
Phys. Chem., 411(2), pp. 328-330.
Cox, J.D., and Pilcher, G. (1970) Thermochemistry of
Organic and Organometallic Compounds. London-New Ovchinnikov, V.V. (2011) Thermochemistry of Heteroato-
York, Academic Press. mic Compounds: Calculation of Combustion and Formati-
on Enthalpies of some Bioorganic Molecules of different
Desai, P., and Wilhoit, R.C. (1970) Heats of combustion Phenanthrenes Rows. Open J. Phys. Chem., 1, pp. 1-5.
and enthalpies of formation of D-ribose, D-arabinose, and
L-ascorbic acid. Thermochim. Acta, 1, pp. 61-64. Ovchinnikov, V.V. (2012) Thermochemistry of Heteroato-

Available online at www.scientific-journals.co.uk 64


Ovchinnikov / Chemistry Journal (2013), Vol. 02, Issue 02, pp. 59-65 ISSN 2049-954X

mic Compounds: Enthalpy of Combustion and Formation


of Organic Compounds of Groups I-VII Elements.
Doklady Phys. Chem., 443, pp. 69-72.

Ovchinnikov, V.V., and Lapteva, L.I. (2011) Thermoche-


mistry of Heteroatomic Compounds: the Heats of Combus-
tion and Formation of Clycoside and Adenosine Phosphat-
es. Intern. J. Org. Chem., 1, pp. 67-70.

Ponomarev, V.V., and Migarskaya, L.B. (1960) Heat of


combustion of some amino-acids. Russ. J. Phys. Chem.
(Engl. Transl.), 34, pp. 1182-1183.

Putnam, R.L., and Boerio-Goates, J. (1993) Heat capacity


measurements and thermodynamic functions of crystalline
sucrose at temepratures from 5 to 342 K. Revised values
for _fGm(sucrose, cr, 298.15 K), _fGm (sucrose, aq,
298.15 K), Sm(sucrose, aq, 298.15 K); and _rGm(298.15
K) for the hydrolysis of aqueous sucrose. J. Chem.
Thermodynam., 25(5), pp. 607-613.

Skuratov, S.M., Strepikheev, A.A., and Kozina, M.P.


(1957) About the reaction activity of five and six-member-
ed heterocyclic compounds. Dokl. Akad. Nauk SSSR,
117, pp. 452-454.

Stepanenko, B.N. (1977) Chemistry and Biochemistry of


Carbohydrates (monosugars). Moskow, Chemistry, pp.
181-192.

White, A., Handler, Ph., Smith, E.L., Hill, R.L., and Lehm-
an, I.R. (1981) Principles of Biochemistry. Moskow,
Chemistry, pp. 617-623.

Wu, D., Finch, A., and Gardner, P.J. (1987) Standard


energy of combustion and enthalpy of formation of -D-
mannose. Wuhan Daxue Zuebao, Ziran Kexueban, pp.
59-63.

Available online at www.scientific-journals.co.uk 65

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