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And similarly for the second differentiation with respect to position for
Equation (2.2):
(2.4)
After equating Equations (2.3) and (2.4) the general wave equation follows:
o2A(x,t) 1 B2A(x,I)
(2.5)
iix2 = v2 iJt'
2n ) = Aosmk
A ( x +k,t . ( x +-;-
2n vt )
(2.7)
= A0 sin(kx -vl + 2n)
2
A(x,I} = Ao sink(x-vt) = Ao sin n (x-vt) (2.8)
).
= Ao sin(h-wl)
26 An /11trod11clio11 to Biomedical Optics
where k designates the wave number of the medium. Then wave number k
and the angular wave fr"'!uency w are related by the expn.>ssion (w/k)=c.
The phase of the wave ' (x,t) is the entire argument or the sine or cosine
term, or, ns shown in the following equation:
The distance over which the sine (or cosine) funcl.ion repeats itself is the
wavelength l.
The angular fr"'!uency w relates to the oscillatory froqu<'llcy (the number
of repetitions of the oscillatory motion per second) by the circumference of
one revolution 211# as cu- 2nr.
Both dCliCliplions are a solution 10 the wilve equation given by
(2.11)
where v equals the speed of propagation of the wave, and for light Equation
(2.11) is rewritten us
a''!' 1 o''I'
-e-- (2.12)
iJX2 c' 012
with c being the speed of light in vacuum. In general, this wove "'!Uation will
have a solution satisfying'!' = 'l'(d- x) .
From Equation (2.12) we can derive the solutions for the electric field
!nlveling in the x-<lirection as expressed by
Another property of electromagnetic waves is lhe fact that they have all the
characteristics found in other waves. As a result on electromagnetic wave
carries both energy and momentum.
Review of Optical Principles 27
For any ordinary wave function, the square of the amplitude is caHed the
intensity of the wave; however, since electromagnetic waves are a combination
of nvo 'vaveforms, the electric and the magnetic 6eld, this requires an entirely
different approach.
For electromagnetic waves the "intensity" is regarded as how much
energy is flo\ving in or out of a surfaoe:e. This is some\vhat in contrast to the
general definition of intensity, which is the square of the amplitude of the
'''ave. Ho,vever, there is no single amplitude iJ'I electromagnet'ic radiation
tllat requires the introduction of several ne\v definitions \Vith respect to the
concept of intensity. Additionally, the surface the electromagnetic radiation
Aows throug h can be a plan e or have a spherical geometry. This leads to a
range of definitions with respect to the concept of "intensity."
So1ne or the concepts in the nomenclature of eJectromagnetic energy trans--
port are defined as follows:
W ; hv (2.14)
The Planck function, derived by Max Planck in his tht'<lry of Lile black
body, is dcfint'd as
2Jiv3
B,<n- c2 -e1-..~"';.,1-_-1 (2.15)
11 = -
c (2.16)
v
When lighl travels fron1 one medium (mediurn 1) into lhc n~xt medium
(mt'Clium 2) the speed of propagation of the ek'Ctromngnetic radiation will
most likely be different. As a result the wavefront will change its course and
produce an angle with the normal (right angle locally to the interface of the
two media) to the boundary(&), which is different from the incident angle
with the normal. This phenomenon was described by Willibrord Von Ro4jen
Snell (1591- 1626), who made his observations on the refraction of light beams
at larger angles and proposed his empirical Law of Refraction in 1621 as
Snells' law =
sjnO
sin01
~ ..... 11,
"
{2.17)
30 A11 l11t""lllctlo11 to l)lometlicnl Optics
- + o''I' o''I'
a''I'
- + il''I'
- - =12 - - (2.18)
ox' ily' Di' 2 c i11
which can be rewritten in vector formal by using the vector r as the indica
tor or position in three-dimensional space as follows:
(2.19)
This can be proven with the help of Gauss's law, Faraday's law, and Maxwell
equations for an electric field oscillating in the y-din.-ction and magnetic
field perpendicular to the electric field oscillating in the zdirection. Both the
electric and the magnetic field then propagate in the t-direction with f(t,1)
= E,,sin (wl- h) and B(x,I) = 80 sin (<lll-h), respectively. With E, =O, E, =O,
,E, and B,O, B,- o, B,=B, Figure 2.1 illustrates the electric field E in the
x-direction perpendicular to the magnetic field B in they-direction for an
electromagnetic wave moving in the z-direction.
2.3.1 Gauss's ~w
<!>=EA (2.20)
FICUllf 2.1
E~ .and l'Nlgrwtk r~lds per
pendi<ul>r to ..rn othtt one! the
dl~Uon of propa.g..tlion for ...,
elc<t~tk W<l\'f',
31
where the electric field E is passing through an area A. In the situation lhot
the field makes an angle 0 with the area ol choice, only the field passing
through the perpendicular projection of the area with the electric field
migration contributes lo the electric flux <1>. Tiie equation becomes
This can al.so be \Vrittcn in vector format as the vector dot product:
<PE= E A (2.22)
The only restriction is that the electric field E needs to be uniform over the
entire area A. In case the electric field is not uniform, the area '"ill need to
be split in to 11 number ol sections where the electric field may be consid
crcd unifonn, nnd subSt.~uc ntly all U1e electric fields 1 through each indJ-
vldual subarea Al\ 1 will need to be added together to provide the total Oux
defined us
(2.23)
When we let the individual areas approach a surfa<e of 0, i.e., M ,-O dA,
the summation can be replaced by an integral over the total area keeping the
electric field distribution in consideration:
(2.24)
1Ns was first postulated by the German mathematlcia.n and p hysicist Carl
Friedrich Gau ss (1777-1855} aroundl 1821, and tics in with the Coulomb
li\V.
Gauss's h1\v considers the situation for a closed surface, such as a
sphere, and the enclosed electric flux represents the c harge Q from which
this clt'Ct-ric nux emanates. The e1ec:lric field distribut-ion can now be writ
ten as
(2.25)
(2.26)
32 An J111roductio11 lo Biomedicnl Optics
Also consider this motion to be over a. distance dt. Gauss now postulated the
fact that magnetic field lines do not run between points, but are closed. This
also means that there is nothing like a magnetic charge. This condition is for-
mulated as
(2.27)
Gauss's law in differential form gives the following two conditions for the
electric and the magnetic field, respectively. When the electric field is prop-
agating in a Cartesian coordinate system in the positive x-direction. with the
field direction in the positive y-direction, and the magnetic field perpendi-
cular to the electric field., also propagating in the positive x-direction,
Gauss's postulates yield the following expressions for the electric and the
magnetic field, respectively:
(2.28)
08 =O (2.29)
ih
(2.30)
A magnetic flux changing over time was found to induce an electrical poten-
e.
tial or "electromotive force" which is equal to the work done on a positive
test charge of I C magnitude, as expressed by
Again. consider a Cartesian coordinate system with the electric fieJd in the
positive y-direction, and the magnctic field perpendicular to the electric
field, in the z-direction. also propagating in the positive x-direction.
Faraday's law in differential form gives the following two conditions for
the electric field and the relationship between the electric and the magnetic
field, respectively:
of:= o (2.32)
ih
Rcvitw of Optical Pri11cilos 33
and
- ---
0
Ox
oB
Ct
(2-33)
Assumin.g time to remain constant during this infinitesimal step, n.nd using
Farnday's law of ind uction, the left-ha nd side o f Equa tion (2.31) can be writ-
ten as
--d<ll.
dJ =
(2.35)
(2.36)
ttnd
d<I> =
di
e(dB)d
di
x
by using the modified Ampere's law:
(2.38)
34 A" /11troi/11ctio11 to Biomedical Optics
After substitution of Equations (2.37) and (2.38) into Equation (2.31) this
yields
08 cE
- -:-
ex = """ -i't (2.39)
8=&
2nr
(2.40)
giving
(2-41)
and
giving
(2.42)
o2E e'E
(2.43)
a'r = <ol'o iil 1
or
Review of Oplicnl J'ri11ciplrs 35
with 1IV' '<Ol'o> the reciprocal of the speed of light in vacuum squared,
c' = l /t<Ql.. Or
(2.44)
(2.45)
~=O (2.46)
Gy
CB cE
- - ioo- (2.47)
ox at
2.3.4 Ene rgy a nd Momentum of Electwomagnelic Waves
The energy density of the electric field of an electromagnetic wave is given
by
(2.48)
1
w = --B' =- 1-E' .!.toE' (2.49)
4'o 2,,r 2
The totul energy density of the electric and magnetic field~ combined is
given by
(2.50)
36 An /11trod11ctiou lo Bio111edical Optics
(2.52)
where
(2.53)
I
I -ct.o~ (2.54)
2
"The cross product of the electric and maS"etic fields, which are perpendicu
lar to each other, is perpendicular to the wavefront and in the direction of
propagation; thus,
(2.55)
The vector c'r-o(EXB) thus hos the m.ngniludc of energy flow density, with
the direction of the wave propagation. This vector expression is called the
Poynting vector. The energy Rux through a surface per unit time belonging
to this Poynling vector is defined in
(2.56)
and
exp(i.:)- exp(- iz}
~n (z) 2i (2.59)
From this '''e c~n see thc1t \Vhcn 'vaves 1and2 have thesamcph.'\Se 2 /J and
the same amplitude A, then the combined effect will be a wave with phase a
and amplitude 2A, i.e.. A"" 2Asin(a). When '"aves l and 2 are 180" out or
p hase, {I. then sin (a- <z)/2= sin(0) will ensure total extinction or the
combined crrect.
38 An /11trod11clio11 to Bio111edicnl Optics
2.3.7 ~Velocity
(2.60)
This is the speed at whkh the profile moves and is commonly known as the
phase velocity.
(2.61)
The real and the imag.inary parts of the index of refraction are defined as
the index of refraction n, and the index of extinction (i.e., absorption) " i
respectively. The complex part of the ;ndex of refraction is considered to
describe the attenuation of e lectromagnetic radiation.
In optics the French mathematician Augustin Louis Caudiy presented a
mathematical treatment under the hypothesis that ether had the mechanical
properties o( an elastic medium. He fornlulated several theoretica_I analyses
on \\1ave propagation in Uquids and ela'Stic rnedia.
The Cauchy integral theorem is primarily us..>d in complex analysis and is
an inlportant statement on path integrals for holomorph_ic functions in the
complex plane. The Cauchy theorem states that if two different paths con-
nect the same two points, and a function is holomorphic in the mathemati
cal space in behveen the hvo paths, then the two path integ.rals of the
function \\1i_ll esse.ntiaUy be the same.
Technically, the Cauchy theorem defines the parameters under which it is
permitted to integrate or differentiate a conlplcx function.
Applying this criterion to the real and imaginary index of refraction, and
substituting a suitable representation (or the dielectric permittivity, the index
of refraction (real part 11,) and the index of extinction (imaginary part 111) can
n
be expressed, respectively as a function of the real and imaginary tri parts
o( the relative permi ttivity using the fo l:Jo,ving equations :
"r = Jt~ +~
2
+trt (2.64)
and
J~ +,~ - tn (2.65)
Iii =
2
40 An /11trod11ctio11 to 6io111edical Optics
i::,=l+i0 (2.66)
where Xo signifies the dipole rontribu lion of the medium, which becomes an
int~ part of the light-tissue interaction for anisotropic media. Here we
have introduced the dimensionless variable
w'
xo= -t (2.67)
"'
\Vhere
(2.68)
(2.69)
where the resonance frequency w,, of the medium is derived from the time-
avcrngcd mechanical energy E., as follows:
(Elrl )=.!.mw'a'
.2 0 M
(2.70)
w here m
is the dipole amplitude and m the dipole mass.
The final dimensionless variable
w 2.n c
.O=-. =- . - (2.71)
a>o 'o ;-o
Combining all the definitions, the relationship between the rel.olive dielectric
permittivity and the introduced dimensionless variables yields the following
expression for the real relative permittivity:
I+ Co (t-.O') - I
... (1- n'>' + P'.O' (2.72)
+z0 (1- n'l[1 - <P' - 2)(111 - 1
+zo[I - (fl' - I)!l' ]
Review of 011tical l'ri,,dples 41
with
I
fl =-. (2.74)
""''
\\'here fJ is a dimensionless variable 'vhich uses the characteristic interaction
time t .
Thus, the index or nafrnction under the Cauchy theorem is expressed as
A = l (l +zoJ
and
(1- Jl'Jzo 4,.r
8
2J(1+ Xol oii
The introduction or the dimensionless variables in Equations (2.67), (2.71),
and (2.74) allows the phase velocity and group velocity lo be rewritten,
respectiveIy, as rollows:
(2.76)
and
(2.77)
The Cauchy theorem is used in Chapter 5 lor the Taylor expansion or the
light propagation. Additionally in Chap ter 8 the Cauchy theorem is used in
the description or index o( refraction d isparities resulting from tissue inho-
mogeneities and th4'rmal effects applied to Sch lieren imaging.
42 A11 /11trad11ctio11 to Bioml'dicnl Optics
1.3.10.1 Microwaves W-
Thio part of the electromagnetic spectrum is used in rador and communic
lion. In addition, it finds applications in investigating fundamental proper-
ties of atoms and molerules. Last but not the leas~ it is used to heat food. The
wavelengths for m.icrowaves range from approximately J m down to J mm
and frequencies between 10' and 1ou Hz. The photon energy over this band
runs from Jo-s to 10- eV.
TABU 2.t
Electromagnetic Spectrum in the V1Sible Ught with Colo<
Arranged with Respect to Wavelength and Frequency
-
co1 ..
01...
Crttn
,.,..low
Or;tni;t
w~nlr-ngth
~
~92
492-577
577._m
597-622
.t (nm) Fttquotney
1~
~10
6.1~
t., o- w
5.21).5.0J
5.~Jll
RA.-d 622-780 .82-3.84
Arr lntrod11clion to Biomedical Optics
~
1 pm I nm 1.m 1mn Im I km
x-ray and the beginning of the gamma-ray spectrum. Gamma rays have
waveleng th between 10- 10 an d 10- 14 m, with the resptlve frequency sp-
trum of 3X1011 to 3X l 0'2 Hz. The energy band runs from 10' to HJ' eV.
Cosmk radiation ca.n be attribu ted! to fast-moving elementary particles
(mesons) from within the nucleus. Cosmic rays have even higher energy lev-
els, and associated extremely short wavelengths. Cosmic rays cannot easily
be stopped under ordinary conditio ns. Both gamma and cosmic rays are
investigated in astronomy research.
Owing to the short wavelengths in the x-ray and gammaray groups the
risk of ionization of organic materials is a serious cona!m. These are the
wavelengths that people need to be shielded from to avoid cancerous expo-
sure.
Figure 2.2 illustrates the range of the electromagnetic spectrum in both
wavelength and frequency domain. The visible spectrum is colored with a
few representative colors; however, the real visible spectrum is a continu-
ously changing color array.
2A Light Sources
In general, light is emitted by an accelerating charge; the acceleration can be
derived from many different sources.
When an atom or a molecule is in its ground state, all the energy levels of
the particle are filled up from the lowest energy state, cl0$CSt to the nucleus,
upward to the energy level that can be filled with all the electrons present
in the orbit around the nucleus in the Bohr atom model, after applying the
Pauli exclusion principle. and the de Broglie orbital restrictions. The Pauli
exclusion principle, devised by Wolfgang Pauli (1900 to 1958), states that at
most two electrons can simultaneously occupy an orbit around a nucleus
with the same energy; however, they will both have opposite spin. The de
Broglie restriction will be discussed in Section 2.5 in greater detail, but
RView of Optical l'ri11ciplts 45
part of two centuries to reach the point from the initial discovery of lenses to
the development of medical apparatus based on light. All the light sources
mentioned so facr are called broadband sources. These sources emit light
ranging across a wide band of the electromagnetic spectrum. They typically
illuminate with the entire visible spectrum, including infrared. For the sun,
the ultraviolet and shorter wavelengths are also integrated. TI>ese broad-
band sources have wavelengths that are not useful in visualiZJtioll, and in
the case of incandescent light or sunlight, there is a significant amount of
infrared radiatioll, which simply adds heat energy. This heat mergy was
responsible for b urning patients, and was one of the main reasons for the
slow acceptance of mdoscopes at the tum of the twentieth century. Later on.
sou m.>S such as nuorcsccnt light and light-emitting diodes (LEDs) were
added to the spectrum of light-emitting devices, and in the invisible short-
wavelcngth spectrum, the X-ray tube. The light emission bandwidth of these
sources was norrowcr than what was available before then. EsJ'<'Cially the
LEDs offer a relatively narrow spectrum, howeve r with only low ava.ilable
output power. In 1960, the LASER (l.ig ht amplification by s timulatt'CI emis-
sion of radiation) was invented, offering high output and extremely narrow
bandwidth, lmding itself ideally for medical applications.
1. Spontaneous emission
2. Stimu4ited emission
3. Absorption
this situation where there are a greater- number of excited atoms in the l3Ser
medium than atoms in the ground state the following conditions need to be
considen>d:
A minimum amount of energy will be requin>d to raise the majority of
atoms to the excited state if all energy injected into the laser medium when
the pumping process of raising the electrons to the excited state is 100%
effective. ln that case only the energy lost due to radiation of light by stimu-
lated emission will need to be replaced.
The excited state may not be a single energy band, but most likely it will
be several bands thut can be excited. Those multiple excitation bands can be
further spl.it into various modes. Each energy mode will have its own char-
acteristic lifetime. When we call the energy modes within one single energy
band Nm and the average lifetime of these individual modes (), the fol-
lowing rela tion for the minimum energy required for pumping the laser
medium to excited slate can be derived.
Consider the idealized situation of a system with just two energy levels,
the ground stole and the excited state. Figure 2.3 illustrates the input of
energy on a two-level system raisillg the ground-state condition to an
excited state.
This system is subjected to an external electromagnetic field. The energy
of a photon is expressed by the Planck relationship
c (2.78)
W s h J1 7,_
The pho ton energy Wis the difference in energy between the excited energy
level E,, a.n d the ground energy level E,, and formula ted as
(2.79)
P= N~ht
(2.80)
)"Otc
flCURf 2.3
Energy addt>d to<1 ground IITT!te r.nl.k'f 1~ 5round 11tate to
an excited sl!te.
Review of Oplic11/ l'ri11ciples 49
"
For spontaneous cnli.ssion the rate of decay is dircct.ly proportional to the
nunlbcr o( <.'xcitcd atoms as
dN
~=-A21 N, (2.82)
dN
:::.:.J. = - R12N , = -B,,U(1 )N1
di (2.83)
where 8 12 is called the absorption coefficient, and has the dimension or time- .
Similarly, in s timulated emission the equation can be rewritten as
dN,
- - - R21 N 2 = - B,1U(10 )N2 (2.84)
di
where 8 12 is called the stimulation prob~bility, and again has the dimension
or time 1
The coerlkicnt 8 11 depends only on t he energy-level transition, and is a
function of the atonl ln question. The decay of the populallon N 1 and N2 also
depends on the magnitude or the flux or the incident electromagnetic wave,
the stimulus photons, and additionally the cross-sectional area or the stimu
lation target.
The stimulated emission can be fonnulated as
(2.&5)
where R21 is the stimul11tcd emission rate. <I> the photon flux, and a11 the
slinlulatc..od emission cross-section.
The coefficients A12, Bw and 811 arc caUt'<l the Einstein coclfidents.
so A" llltrod11ctio11 to Biom,./ical Optics
(2.86)
This can be done purely o n the basis of the assumption that this system only
has two energy levels.
Utilizing Planck's blackbody radiation equation for a b lackbody at tem
perature T, emitting electromagnetic radiation \Vilh a SJX'Clral content of
U(v) is given by
(2.88)
where e' is the eigenvalue for the resonance energy density per photon, and
(n) the average number or photons in each resonance energy density. The
Planck's law will be described in detail in Ch.1pter 14, section 14.12, under
Thermographic imaging.
The occupation of lhc levels N1 and Nz in thermal equilibrium sotisfies the
expression
N, - g,
~ - -exp
[-/- 11] (2.89)
N 1 g, kT
where g, and g1 are the radiation weights or the respective energy levels.
Under thermal equmbrium the decay rate from level I <'qUals the decay
rate from level 2, and they both will n ot experience decoy. This condition is
formulated os
(2.91)
Review of Oplicnl Pri11ciples 51
Now,
(2.92)
from which the conditions for the electromagnetic field can be solved as
U(ol (N)
s,, N - a,, (2.93)
'
Using the conditions for the ratio of occupation of the two IC\'Cls in them>al
equilibrium, in combination with the blackbody radiation, the Einstein coef
ficicnts c~n be cor'l"elatcd to each othc.r as follo\vs:
g,- --B21
B1 2 (2.94)
g,
and
(2.95)
where U,(r,) n'/<' represents the spectral energy density of one photon per
eigenvalue oscillation when the average number of photons in each eigen
value oscil!.ltion is one single photon..
Thls indicates that the stimulatl emission in an extcm.11 fleld equals the
spontaneous emission, under conditions of a single photon in each energy
configuration. This condition is satisfied due to the Pauli exclusion principle
and the de Broglie orbital restrictions.
The fuel that the energy levels are split up due to orbital restrictions in the
Bohr atom model, the emission will not consist of a single narrow wave
length, but rather a spectrum with a linewidth. This linewidth will be dk
taled by the elements used to generate the loser medium.
When the Average number of photons in each resonance energy density
(n) < I spontaneous emission will dominate, and when (n) > I, there is pre-
dominantly stimulated emission.
2.4.2.4 Amplification
As a laser beam passes through an active medium, the rate of change of pho-
ton nux <!> is given by
where
(2.97)
yielding
<!> <l>(O)e'"'' (2.99)
!'N!tii..,..,.._ =exp-[~)
1 kT
(2. 100)
In the laser oscillato r the pumping process makes the popullltion inversion
positive and the amplification of the photon nux can be deterrnined on the
basis o r the threshold condition expressed by
where R1 and R, are the respective reflectance of the mirrors on both sides
of the cavity when intcmal losses are neglected.
The critical population inversion is OO\V given by
AN = _ ln(R,R2 ) (2.10'2)
< 2ol
TABLE 2.2
Various Chemical Lasers and the Emission
\\lovelenglh
W1vt:length (Jun)
Hf 2.6-33
DF 3.54.2
Hlk 41>-4 '
co...ico, 4.9-S.l!nd 10.0-11.0
lodint (Cl'JI) 1.)15