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ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Dept of Chem Eng, BUET


ChE 473: Lecture 21-24

ChE 473: Biochemical Eng I


Biosafety and Sterilization
Lecture 21-24
May 2017

Course Teacher:
Dr. Mohidus Samad Khan
www.mohidkhan.com 1

References

Russell, Hugo & Ayliffe’s Principles and


Practice of Disinfection, Preservation &
Sterilization, 5th Ed, 2013, Willey-Blackwell.

Kolhe, Shah and Rathore (2013), Sterile


Product Development – Formulation,
Process, Quality and Regulatory
Considerations.

Class Lectures and Reading Materials

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24

© Dr. Mohidus Samad Khan. 2017 1


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Biosafety Laboratory

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 3

Biosafety Laboratory
• Biosafety Level 1 Lab (BSL 1) :
– i) Work with agents with Little Potential Hazard to lab personnel and
the environment
– ii) Using Fume Hoods and Biosafety Cabinets are preferred
– iii) Contaminated samples need to be disposed
– iv) similar to a high school biology lab
• Biosafety Level 2 Lab (BSL 2) :
– i) Work with agents with Moderate Potential Hazard to lab personnel
and the environment
– ii) 100% air filtration required
– iii) Contaminated samples need to be disposed
– iv) Access to the laboratory is limited to the trained personnel.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 4

© Dr. Mohidus Samad Khan. 2017 2


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Biosafety Laboratory
• Biosafety Level 3 Lab (BSL 3) :
– i) BSL 3 is required to work on Infectious Disease Research
– ii-iv) BSL2 requirements
– v) Continuous Power supply.

– Biosafety Level 4 Lab (BSL 4) :


– i) Work with Dangerous Agents that pose a high risk of Aerosol
Transmitted Infections
– ii-v) BSL 3 requirements.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 5

Cleanroom Standard
Ref: Wikipedia: Cleanroom

Video Demonstration : (8:02 min)


Semiconductor Technology at TSMC, Taiwan
Dept of Chem Eng, BUET
Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 6

© Dr. Mohidus Samad Khan. 2017 3


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Cleanroom Requirements
• Active Air Monitoring:
– microbes in the air in the clean areas that may be sampled using
devices such as slit-to-agar or surface air system samplers.

• Surface Monitoring:
– contact or touch plates or swabs that can sample surfaces such as
walls, floors, or

• Passive Air Monitoring:


– bacterial culture plates (“settle plates”) exposed to the environment
allowing any airborne bacteria above the plate to fall onto it.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 7

Sterilization

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 8

© Dr. Mohidus Samad Khan. 2017 4


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Sterilization
• “Sterilization” is an absolute term meaning the ability to
destroy all life forms. Sterilization, by its very nature,
damages or alters the materials subjected to the process.

• Relevant Sectors
• Medical
• Pharmaceutical
• Biotechnology
• Food
• Circuits, etc.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24

Sterilization
• Heat Sterilization
• Moist Heat/Steam Sterilization
• Dry Heat Sterilization
• Gas/Chemical Sterilization
• Alkylating Agents
• Oxidizing Agents
• Filtration Sterilization
• Filtration of Liquid, Solid or Gas
• Irradiation Sterilization
• Gamma Radiation
• E-Beam,
• Beta Radiation.
• Gas Plasma Sterilization
Dept of Chem Eng, BUET
Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24

© Dr. Mohidus Samad Khan. 2017 5


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Heat Sterilization

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 11

Heat Sterilization
• Heat is now the major sterilization
method in use worldwide employing
pressurized steam.
• Heat has also been used in combination
with other microbicidal agents, including
chemicals and ionizing radiation.
• Aim - To deliver sufficient heat to
inactivate all of the organisms that might
be present
• Critical Factors – Temperature, Pressure
and Time
Dept of Chem Eng, BUET
Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 12

© Dr. Mohidus Samad Khan. 2017 6


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Heat Sterilization: Techniques


• Moist Heat/Stem Sterilization -
• The heat from the steam kills microorganisms, and
the effectiveness of the sterilization depends both
on the amount of time the items in the load are
exposed to the steam and the efficiency of steam
penetration into all product surfaces and spaces.

• Dry Heat Sterilization -


• Dry heat sterilization may be accomplished
using ovens specially designed to handle
components of pharmaceuticals.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24

Steam Sterilization: Autoclave

14

© Dr. Mohidus Samad Khan. 2017 7


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Steam Sterilization: Autoclave

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 15

Autoclave: Cycles

http://www.rpi.edu/dept/chem-eng/Biotech-
Environ/Projects00/sterilize/batch.html

http://www.intertechequip.com/DRY_
HEAT_STERILIZER.html

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 16

© Dr. Mohidus Samad Khan. 2017 8


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Steam Sterilization: Types

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 17

Steam Sterilization: Uses

18

© Dr. Mohidus Samad Khan. 2017 9


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Kinetics of Heat Inactivation

http://academic.pgcc.edu/~kroberts/Lecture/Chapter%209/heat.html
The decimal reduction time (D) represents the time it takes
for 90% of a population of microbes to be killed by a
particular method of microbial control, such as autoclaving.

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 19

Kinetics cont’d

At Constant
Temperature

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 20

© Dr. Mohidus Samad Khan. 2017 10


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Kinetics cont’d
• Factors to Characterize Thermal Inactivation
• D-value - The D-value (decimal reduction time (DRT)), is defined as the
time in minutes at a particular constant temperature to reduce the viable
population by 1-log10, that is to 10% of the initial value, or by 90%.
• z-value - The z-value is defined as the temperature (°C) to bring about a
10-fold reduction in D-value; it is obtained from the slope of the curve in
which the D-value on a logarithmic scale is plotted against temperature
on an arithmetic scale.
• F-value - The F-value expresses a heat treatment at any temperature as
equivalent to that effect produced by a certain number of minutes at
121°C; F0 is the F-value when z is 10°C.

Kinetics cont’d

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 22

© Dr. Mohidus Samad Khan. 2017 11


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Steam Sterilization: T-P Relationship

23

Thermal Death Kinetics of Microorganisms

N = Number of viable organism


k = Thermal death rate constant
A = Arrhenius Constant
E = Activated Energy

© Dr. Mohidus Samad Khan. 2017 12


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Thermal Death Kinetics Cont’d

http://www.rpi.edu/dept/chem-eng/Biotech-
Environ/Projects00/sterilize/batch.html

Dry Heat Sterilizer


• Sterilization by dry heat is less efficient than by
moist heat.
• Definitions of D-value and z-value given for moist
heat above apply equally here.
• The F-value concept utilized in steam-sterilization
processes has an equivalent in dry-heat
sterilization, although its application has been
limited.
• Dry heat as a means of sterilization is reserved for
those products and materials that contain little or
no water and cannot be saturated with steam
during the heating cycle.
• A hot-air oven is usually employed to effect dry-
heat sterilization.
Dept of Chem Eng, BUET
Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 26

© Dr. Mohidus Samad Khan. 2017 13


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Dry Heat Sterilizer Cont’d

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 27

Dry Heat Sterilizer Cont’d

http://www.outpatientsurgery.net/surgical-facility-administration/infection-
control/infection-prevention--01-02

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 28

© Dr. Mohidus Samad Khan. 2017 14


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Thermal Processing of Foods


• Thermal processing of high pH (low acid) and
high water activity (Aw) foods - Pasteurization
• Destroy or inactivate microorganisms
• Improve shelf-life
• Heat Sterilization: Combination Treatment
• Heat Sterilization + Acidification
• Heat Sterilization + Chill Storage
• Heat Sterilization + High Hydrostatic Pressure.
• Etc.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 29

Filtration Sterilization

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 30

© Dr. Mohidus Samad Khan. 2017 15


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Filtration Sterilization
• Old technique: Cloth Filtration: 400 BC; Sand Filtration: 3-4 century AD
• Can be used for Liquid, Solid and Gas
• Filtration Media: Key Characteristics
• Efficient removal of particles above a stated size;
• Acceptably high flow rate;
• Resistance to clogging;
• Steam Sterilisable;
• Flexibility and mechanical strength;
• Low potential to release fibers or chemicals into the filtrate;
• Low potential to sorb materials from the liquids being sterilized;
• Non-pyrogenic; and
• Biologically inert.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 31

Cells: Dimension

Ref: click4biology.info; 2013


Relative sizes:
1. Molecules (1nm).
2. Cell membrane thickness (10nm).
3. Virus (100nm).
4. Bacteria (1000nm).
5. Organelles (less 10,000nm).
6. Cells (<0.10 mm).
Dept of Chem Eng, BUET
Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 32

© Dr. Mohidus Samad Khan. 2017 16


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Figure: Staphyllococcus aureus retained on the surface of a


0.45 micrometer cast Durapore™® membrane
Dept of Chem Eng, BUET
Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 33

Filter Devices
Table: Filter Device Properties

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 34

© Dr. Mohidus Samad Khan. 2017 17


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Filter Devices: Performance


• Log Reduction Value (LRV)
• C = Concentration of Microorganisms
(CFU/ml)
• V = Liquid Volume
• Higher LRVs mean larger
reductions in bioburden and
higher filtrate sterility
assurance.

Dept of Chem Eng, BUET


Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 35

Membrane Filters: Flow Direction

Figure: Comparison between (a) normal and (b) cross-flow filtration.

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 36

© Dr. Mohidus Samad Khan. 2017 18


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Membrane Filters: Pore Size Distribution

Figure: Typical pore size distribution curves for 0.45 m-rated cellulose
membranes obtained from mercury intrusion tests.

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 37

Membrane Filters: Properties of Polymers

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 38

© Dr. Mohidus Samad Khan. 2017 19


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Gas Sterilization

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 39

Gas Sterilization
• Evolution of Gas Sterilization
• Chlorine Gas (sulfuric acid + sea salt) to
remove odor from Cemetry (18th
Century)
• Chlorine gas produced from
Chlorhydric Acid
• Disinfecting Hospitals with
Formaldehyde (19th Century)
• Modern Days:
• Gaseous Sterilization of Hospitals with
Ethylene Oxide
• Low temperature sterilization based on
Hydrogen Peroxide, Peracetic Acid,
Ozone, and Chlorine Oxide
Dept of Chem Eng, BUET
Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 40

© Dr. Mohidus Samad Khan. 2017 20


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Properties of Gaseous Sterilants

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 41

Gas Sterilization: Formaldehyde

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 42

© Dr. Mohidus Samad Khan. 2017 21


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Gas Sterilization: Hydrogen Peroxide

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 43

Gas Sterilization: Comparison

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 44

© Dr. Mohidus Samad Khan. 2017 22


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Irradiation Sterilization

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 45

Irradiation Sterilization
• Irradiation, or Ionization Radiation,
is a type of ‘Cold’ Sterilization
• Radiation Sterilization:
• Gamma Radiation
• E-Beam,
• Beta Radiation.
• Sources:
• Gamma Radiation (Cobalt 60 (60Co))
• Electron Beam (E-Beam, high energy
electrons)

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 46

© Dr. Mohidus Samad Khan. 2017 23


ChE 473: Biochemical Eng I; Lecture 21-24 May 2017

Irradiation Sterilization: Units

47

End

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Course: ChE 473. Dept of Chem Eng, BUET.  Dr. Mohidus Samad Khan 2016 ChE 473: Lecture 21-24 48

© Dr. Mohidus Samad Khan. 2017 24

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