=== Run information ===

Scheme: weka.clusterers.SelfOrganizingMap -L 1.0 -O 2000 -C 1000 -H 2 -W 2

Relation: Spellman

Instances: 4381

Attributes: 24

time

40

50

60

70

80

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110

120

130

140

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170

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Test mode: evaluate on training data

=== Clustering model (full training set) ===

Self Organized Map

==================

Number of clusters: 4

Cluster

Attribute 0 1 2 3

(984) (1544) (568) (1285)

====================================================

time

value 4037.176 4106.1927 3525.4191 3975.1125

min 2 1 6 0

max 4380 4376 4354 4378

mean 2381.7195 2280.8303 2128.169 1961.3821

std. dev. 1243.4632 1235.9443 1221.9709 1298.5954

40

value 0.4111 0.1216 -0.3954 -0.2429

min -1.105 -1.205 -3.295 -2.925

max 1.93 1.3 1.845 1.345

mean 0.3809 0.0933 -0.3547 -0.2221

std. dev. 0.3597 0.3043 0.5587 0.4104

50

value 0.3942 0.1371 -0.4945 -0.3033

min -0.83 -0.86 -3.96 -3.25

max 2.06 1.77 1.16 1.17

mean 0.3726 0.1241 -0.4504 -0.2604

std. dev. 0.3446 0.2968 0.5452 0.4132

60

value 0.3059 0.1214 -0.4293 -0.2138

min -0.565 -0.68 -2.44 -2.28

max 1.805 1.385 0.145 0.7

mean 0.2975 0.1329 -0.4132 -0.194

std. dev. 0.2386 0.2127 0.3886 0.2789

70
value 0.2176 0.1056 -0.3641 -0.1244

min -0.92 -2.5 -3.15 -3.73

max 1.77 1.7 0.98 1.37

mean 0.2223 0.1418 -0.3759 -0.1276

std. dev. 0.2827 0.3045 0.4285 0.3868

80

value -0.3326 0.0378 -0.4432 0.1923

min -1.84 -1.61 -2.45 -1.24

max 1.11 1.61 0.63 1.88

mean -0.2731 0.0808 -0.399 0.2531

std. dev. 0.3523 0.3313 0.4298 0.3278

90

value 0.2132 0.0495 -0.2125 -0.1129

min -2.23 -2.64 -2.94 -3.6

max 2.36 4.14 1.82 1.95

mean 0.1928 0.0533 -0.2411 -0.2103

std. dev. 0.3355 0.3413 0.4754 0.438

100

value -0.2062 0.0541 -0.2117 0.3355

min -2.42 -1.54 -2.13 -0.81

max 1.96 1.89 1.31 2.4

mean -0.1855 0.0284 -0.2327 0.3037

std. dev. 0.3632 0.3296 0.4387 0.3586

110

value 0.1882 0.0033 0.0393 -0.0388

min -2.6 -2.1 -4.08 -2.73

max 2.76 1.23 1.86 1.57

mean 0.1572 0.0147 0.0061 -0.094

std. dev. 0.3656 0.3075 0.489 0.3804

120

value -0.5493 -0.15 -0.1973 0.2394

min -2.5 -2.28 -1.77 -1.12

max 1.73 2.29 2.59 3.06

mean -0.463 -0.0941 -0.1375 0.2609

std. dev. 0.356 0.3773 0.5115 0.4266

130

value 0.284 0.0697 0.2512 -0.1655

min -1.68 -2.07 -1.75 -4.12

max 1.83 1.36 2.38 1.39

mean 0.2759 0.0454 0.2336 -0.1777

std. dev. 0.2836 0.2684 0.4291 0.3769

140

value -0.2487 -0.1052 -0.1017 -0.045

min -1.31 -1.5 -1.35 -1.36

max 1.54 2.02 2.44 2.41

mean -0.2736 -0.1133 -0.082 0.0577

std. dev. 0.3381 0.3144 0.4435 0.3382

150

value 0.1897 0.1581 0.1799 0.0142

min -0.94 -1.55 -1.49 -2.06

max 1.89 2.13 2.16 1.92

mean 0.2111 0.148 0.1597 -0.0049

std. dev. 0.3219 0.3185 0.3747 0.3777

160

value -0.4504 -0.0919 -0.2365 0.0634

min -2.58 -1.51 -1.7 -1.67

max 1.65 1.99 2.32 1.12

mean -0.3904 -0.0583 -0.1752 0.1342

std. dev. 0.3884 0.3284 0.384 0.3303

170

value 0.159 0.0834 0.0657 -0.0443

min -0.9 -1.27 -1.67 -3.78

max 1.95 1.79 1.25 1.71

mean 0.1651 0.0918 0.0494 -0.0501

std. dev. 0.2826 0.2918 0.3591 0.4005

180

value -0.3009 0.0487 -0.0532 0.3221

min -2.2 -1.5 -1.71 -1.32

max 1.64 1.91 1.15 2.78

mean -0.3498 0.0252 -0.0888 0.353

std. dev. 0.4067 0.3746 0.4493 0.3941

190

value 0.215 -0.0297 -0.0122 -0.2317

min -1.45 -4.63 -2.05 -3.42

max 1.41 1.24 1.23 0.97

mean 0.1984 -0.0127 -0.0213 -0.2411

std. dev. 0.2622 0.3005 0.4187 0.3466

200

value -0.241 0.0416 -0.0294 0.3384

min -1.96 -2.6 -2.1 -1.44

max 1.3 3.01 1.48 2.72

mean -0.3513 -0.0037 -0.1377 0.2626

std. dev. 0.3648 0.346 0.44 0.3553

210

value 0.1305 -0.0395 0.1277 -0.2129

min -1.25 -2.2 -1.35 -2.46

max 0.86 2.25 1.58 1.31

mean 0.1364 -0.0371 0.1112 -0.1944

std. dev. 0.2752 0.2802 0.3949 0.3634

220

value -0.5736 -0.049 0.0518 0.485

min -1.79 -0.89 -1.63 -0.89

max 0.35 0.95 2.48 2

mean -0.5179 -0.0171 0.05 0.4744

std. dev. 0.3298 0.2783 0.4359 0.3236

230

value -0.26 -0.3705 0.3065 0.027

min -1.76 -2.01 -1.03 -1.34

max 1.48 1.19 1.96 1.56

mean -0.1554 -0.246 0.4025 0.1075

std. dev. 0.4728 0.4617 0.4518 0.4215

240

value -0.3107 0.1238 0.3476 0.5592

min -1.84 -1.31 -1.14 -1.02

max 1.02 1.27 2.13 2.35

mean -0.3861 0.0348 0.2989 0.5263

std. dev. 0.3739 0.3337 0.4579 0.3491

250

value 0.3174 -0.0225 0.5509 -0.3126

min -0.93 -2.24 -0.64 -3.42

max 1.54 1.01 2.45 1.08

mean 0.3073 -0.0667 0.5533 -0.3431

std. dev. 0.3099 0.2983 0.4171 0.3611

260

value 0.2301 -0.052 0.482 -0.294

min -0.775 -1.205 -0.78 -2.25

max 1.67 1.065 2.64 0.94

mean 0.2187 -0.0901 0.4777 -0.3125

std. dev. 0.2889 0.2519 0.4043 0.2694

Time taken to build model (full training data) : 424.95 seconds

=== Model and evaluation on training set ===

Clustered Instances

0 984 ( 22%)

1 1544 ( 35%)

2 568 ( 13%)
3 1285 ( 29%)

=== Run information ===

Scheme: weka.clusterers.SimpleKMeans -init 0 -max-candidates 100 -periodic-pruning 10000 -min-

density 2.0 -t1 -1.25 -t2 -1.0 -N 2 -A "weka.core.EuclideanDistance -R first-last" -I 500 -num-slots 1 -S 10

Relation: Spellman

Instances: 4381

Attributes: 24

time

40

50

60

70

80

90

100

110

120

130

140

150

160

170

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210

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260

Test mode: evaluate on training data

=== Clustering model (full training set) ===

kMeans

======

Number of iterations: 15

Within cluster sum of squared errors: 4966.7421516945

Initial starting points (random):

Cluster 0: YDR205W,0.06,0.06,0.09,0.12,0.43,0.22,0.47,0.39,-2.28,0.15,0.16,0.24,0.36,-0.15,0.03,-
0.12,0.55,-0.05,0.55,-0.32,0.33,-0.24,-0.32

Cluster 1: YHR079C,-0.05,-0.11,-0.055,0,0.25,-0.29,0.26,-0.08,0.19,-0.24,0.04,0.25,0.3,0.18,0.68,-0.19,-
0.38,-0.17,0.45,0.27,0.12,-0.47,-0.535
Missing values globally replaced with mean/mode

Final cluster centroids:

Cluster#

Attribute Full Data 0 1

(4381.0) (2240.0) (2141.0)

=============================================

time YAL001C YAL014C YAL001C

40 0.0073 0.2116 -0.2065

50 -0.0073 0.2104 -0.2351

60 0.0032 0.1721 -0.1735

70 0.0137 0.1339 -0.112

80 -0.0104 -0.1694 0.1561

90 -0.0309 0.0993 -0.167

100 0.0272 -0.1337 0.1956

110 0.0137 0.0911 -0.0672

120 -0.0784 -0.3189 0.1731

130 0.0561 0.2009 -0.0953

140 -0.0951 -0.2013 0.016

150 0.1188 0.1916 0.0427

160 -0.0916 -0.2546 0.0789

170 0.0612 0.1344 -0.0155

180 0.0224 -0.2037 0.2589

190 -0.0334 0.1107 -0.1841

200 -0.021 -0.2191 0.1862

210 -0.025 0.0768 -0.1316

220 0.0233 -0.2962 0.3575

230 -0.0379 -0.1302 0.0587

240 0.1187 -0.182 0.4333

250 0.0166 0.2186 -0.1947

260 -0.0124 0.1541 -0.1865

Time taken to build model (full training data) : 0.32 seconds

=== Model and evaluation on training set ===

Clustered Instances

0 2240 ( 51%)

1 2141 ( 49%)