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Taxation; Due Process; While taxes are the lifeblood of the revenue taxes, fees, and charges, and

d charges, and the enforcement of all


government and should be collected without unnecessary forfeitures, penalties, and fines connected therewith, including the
hindrance, such collection should be made in accordance with law execution of judgments in all cases decided in its favor by the
as any arbitrariness will negate the very reason for government Court of Tax Appeals and the ordinary courts. Said Bureau shall
itself.—It has been repeatedly observed, and not without merit, also give effect to and administer the supervisory and police power
that the enforcement of tax laws and the collection of taxes, is of conferred to it by this Code or other laws.”
paramount importance for the sustenance of government. Taxes
are the lifeblood of the government and should be collected without Same; Same; Same; Same; The approval of the court, sitting in
unnecessary hindrance. However, such collection should be made probate, or as a settlement tribunal over the deceased is not a
in accordance with law as any arbitrariness will negate the very mandatory requirement in the collection of estate taxes.—From the
reason for government itself. It is therefore necessary to reconcile foregoing, it is discernible that the approval of the court, sitting in
the apparently conflicting interests of the authorities and the probate, or as a settlement tribunal over the deceased is not a
taxpayers so that the real purpose of taxation, which is the mandatory requirement in the collection of estate taxes. It cannot
promotion of the common good, may be achieved. therefore be argued that the Tax Bureau erred in proceeding with
the levying and sale of the properties allegedly owned by the late
Same; Courts; Probate Courts; Jurisdiction; The authority of the President, on the ground that it was required to seek first the
Regional Trial Court, sitting, albeit with limited jurisdiction, as a probate court’s sanction. There is nothing in the Tax Code, and in
probate court over the estate of a deceased individual, is not a the pertinent remedial laws that implies the necessity of the
trifling thing, but the court’s jurisdiction, once invoked, and made probate or estate settlement court’s approval of the state’s claim
effective, cannot be treated with indifference nor should it be for estate taxes, before the same can be enforced and collected.
ignored with impunity by the very parties invoking its authority.—
Concededly, the authority of the Regional Trial Court, sitting, albeit Same; The deficiency tax assessment, if it has already become
with limited jurisdiction, as a probate court over estate of deceased final, executory, and demandable, may be collected through the
individual, is not a trifling thing. The court’s jurisdiction, once summary remedy of distraint or levy pursuant to Section 205 of
invoked, and made effective, cannot be treated with indifference the NIRC.—We hold otherwise. The Notices of Levy upon real
nor should it be ignored with impunity by the very parties invoking property were issued within the prescriptive period and in
its authority. In testament to this, it has been held that it is within accordance with the provisions of the present Tax Code. The
the jurisdiction of the probate court to approve the sale of deficiency tax assessment, having already become final, executory,
properties of a deceased person by his prospective heirs before and demandable, the same can now be collected through the
final adjudication; to determine who are the heirs of the decedent; summary remedy of distraint or levy pursuant to Section 205 of
the recognition of a natural child; the status of a woman claiming the NIRC.
to be the legal wife of the decedent; the legality of disinheritance
of an heir by the testator; and to pass upon the validity of a waiver Same; Estates Taxes; The omission to file an estate tax return,
of hereditary rights. and the subsequent failure to contest or appeal the assessment
made by the BIR is fatal, as under Section 223 of the NIRC, in case
Same; Same; Same; Same; Separation of Powers; In the of failure to file a return, the tax may be assessed at any time
Philippine experience, the enforcement and collection of estate tax within ten years after the omission, and any tax so assessed may
is executive in nature.—In the Philippine experience, the be collected by levy upon real property within three years following
enforcement and collection of estate tax, is executive in character, the assessment of the tax.—The omission to file an estate tax
as the legislature has seen it fit to ascribe this task to the Bureau return, and the subsequent failure to contest or appeal the
of Internal Revenue. Section 3 of the National Internal Revenue assessment made by the BIR is fatal to the petitioner’s cause, as
Code attests to this: “Sec. 3. Powers and duties of the Bureau.— under the above-cited provision, in case of failure to file a return,
The powers and duties of the Bureau of Internal Revenue shall the tax may be assessed at any time within ten years after the
comprehend the assessment and collection of all national internal omission, and any tax so assessed may be collected by levy upon
real property within three years following the assessment of the Same; Same; Even an assessment based on estimates is prima
tax. Since the estate tax assessment had become final and facie valid and lawful where it does not appear to have been
unappealable by the petitioner’s default as regards protesting the arrived at arbitrarily or capriciously.—Even an assessment based
validity of the said assessment, there is now no reason why the on estimates is prima facie valid and lawful where it does not
BIR cannot continue with the collection of the said tax. Any appear to have been arrived at arbitrarily or capriciously. The
objection against the assessment should have been pursued burden of proof is upon the complaining party to show clearly that
following the avenue paved in Section 229 of the NIRC on protests the assessment is erroneous. Failure to present proof of error in
on assessments of internal revenue taxes. the assessment will justify the judicial affirmance of said
assessment. In this instance, petitioner has not pointed out one
Same; Same; Ill-Gotten Wealth; The mere fact that the decedent single provision in the Memorandum of the Special Audit Team
has pending cases involving ill-gotten wealth does not affect the which gave rise to the questioned assessment, which bears a trace
enforcement of tax assessments over the properties indubitably of falsity. Indeed, the petitioner’s attack on the assessment bears
included in his estate.—Petitioner further argues that “the mainly on the alleged improbable and unconscionable amount of
numerous pending court cases questioning the late president’s the taxes charged. But mere rhetoric cannot supply the basis for
ownership or interests in several properties (both real and the charge of impropriety of the assessments made.
personal) make the total value of his estate, and the consequent
estate tax due, incapable of exact pecuniary determination at this Same; Same; Actions; Certiorari; Objections to assessments
time. Thus, respondents’ assessment of the estate tax and their should be raised by means of the ample remedies afforded the
issuance of the Notices of Levy and sale are premature and taxpayer by the Tax Code, with the Bureau of Internal Revenue
oppressive.” He points out the pendency of Sandiganbayan Civil and the Court of Tax Appeals, and not via a Petition for Certiorari,
Case Nos. 0001-0034 and 0141, which were filed by the under the pretext of grave abuse of discretion.—Moreover, these
government to question the ownership and interests of the late objections to the assessments should have been raised,
President in real and personal properties located within and outside considering the ample remedies afforded the taxpayer by the Tax
the Philippines. Petitioner, however, omits to allege whether the Code, with the Bureau of Internal Revenue and the Court of Tax
properties levied upon by the BIR in the collection of estate taxes Appeals, as described earlier, and cannot be raised now via Petition
upon the decedent’s estate were among those involved in the said for Certiorari, under the pretext of grave abuse of discretion. The
cases pending in the Sandiganbayan. Indeed, the court is at a loss course of action taken by the petitioner reflects his disregard or
as to how these cases are relevant to the matter at issue. The even repugnance of the established institutions for governance in
mere fact that the decedent has pending cases involving ill-gotten the scheme of a well-ordered society. The subject tax assessments
wealth does not affect the enforcement of tax assessments over having become final, executory and enforceable, the same can no
the properties indubitably included in his estate. longer be contested by means of a disguised protest. In the main,
Certiorari may not be used as a substitute for a lost appeal or
Same; Same; It is not the Department of Justice which is the remedy. This judicial policy becomes more pronounced in view of
government agency tasked to determine the amount of taxes due the absence of sufficient attack against the actuations of
upon the estate but the Bureau of Internal Revenue, whose government.
determinations and assessments are presumed correct and made
in good faith.—It is not the Department of Justice which is the Same; Same; Parties; In the case of notices of levy issued to
government agency tasked to determine the amount of taxes due satisfy the delinquent estate tax, the delinquent taxpayer is the
upon the subject estate, but the Bureau of Internal Revenue, Estate of the decedent, and not necessarily, and exclusively, the
whose determinations and assessments are presumed correct and heirs of the deceased.—We do not agree. In the case of notices of
made in good faith. The taxpayer has the duty of proving levy issued to satisfy the delinquent estate tax, the delinquent
otherwise. In the absence of proof of any irregularities in the taxpayer is the Estate of the decedent, and not necessarily, and
performance of official duties, an assessment will not be disturbed. exclusively, the petitioner as heir of the deceased. In the same
vein, in the matter of income tax delinquency of the late president
and his spouse, petitioner is not the taxpayer liable. Thus, it Second, donative intent is not negated when the person donating
follows that service of notices of levy in satisfaction of these tax has other intentions, motives or purposes which do not contradict
delinquencies upon the petitioner is not required by law, as under donative intent. This Court is not convinced that since the purpose
Section 213 of the NIRC, which pertinently states: “x x x . . . Levy of the contribution was to help elect a candidate, there was no
shall be effected by writing upon said certificate a description of donative intent. Petitioners’ contribution of money without any
the property upon which levy is made. At the same time, written material consideration evinces animus donandi. The fact that their
notice of the levy shall be mailed to or served upon the Register of purpose for donating was to aid in the election of the donee does
Deeds of the province or city where the property is located and not negate the presence of donative intent.
upon the delinquent taxpayer, or if he be absent from the
Philippines, to his agent or the manager of the business in respect Same; Same; Same; Donative intent is not negated by the
to which the liability arose, or if there be none, to the occupant of presence of other intentions, motives or purposes which do not
the property in question. x x x” Marcos II vs. Court of Appeals, contradict donative intent.—Since the purpose of an electoral
273 SCRA 47, G.R. No. 120880 June 5, 1997 contribution is to influence the results of the election, petitioners
again claim that donative intent is not present. Petitioners attempt
Taxation; Estate Tax; Bank Deposits; Estate tax may also serve as to place the barrier of mutual exclusivity between donative intent
guard against the release of deposits to persons who have no and the purpose of political contributions. This Court reiterates that
sufficient and valid claim over the deposits.—Taxes are created donative intent is not negated by the presence of other intentions,
primarily to generate revenues for the maintenance of the motives or purposes which do not contradict donative intent.
government. However, this particular tax may also serve as guard Abello vs. Commissioner of Internal Revenue, 452 SCRA
against the release of deposits to persons who have no sufficient 162, G.R. No. 120721 February 23, 2005
and valid claim over the deposits. Based on the assumption that
only those with sufficient and valid claim to the deposit will pay the Taxation; Gift tax; Donation out of gratitude for past services
taxes for it, requiring the certificate from the BIR increases the taxable.—A donation made by a corporation to the heirs of a
chance that the deposit will be released only to them. Philippine deceased officer out of gratitude for his past services is subject to
National Bank vs. Santos, 744 SCRA 664, G.R. No. 208295 the donees’ gift tax.
December 10, 2014
Same; Same; Same; No deduction for value of past services.—A
Civil Law; Donations; Elements of a Donation.—Donation has the donation made out of gratitude for past services is not subject to
following elements: (a) the reduction of the patrimony of the deduction for the value of said services which do not constitute a
donor; (b) the increase in the patrimony of the donee; and, (c) the recoverable debt.
intent to do an act of liberality or animus donandi.
Same; Same; Same; Gratitude not consideration under tax code.—
Same; Same; Same; Petitioners’ contribution of money without Gratitude has no economic value and is not “consideration” in the
any material consideration evinces animus donandi; The fact that sense that the word is used under Section 311 of the Tax Code.
their purpose for donating was to aid in the election of the donee
does not negate the presence of donative intent.—Since animus Same; Same; Collection of interest and surcharge for delay in
donandi or the intention to do an act of liberality is an essential payment of tax mandatory.—Section 119, paragraph (b)(1) and (c)
element of a donation, petitioners argue that it is important to look of the Tax Code does not confer on the Commissioner of Internal
into the intention of the giver to determine if a political contribution Revenue or on the courts any power and discretion not to impose
is a gift. Petitioners’ argument is not tenable. First of all, donative the 1% interest monthly and the 5% surcharge for delay in
intent is a creature of the mind. It cannot be perceived except by payment of the gift tax already assessed. Pirovano vs.
the material and tangible acts which manifest its presence. This Commissioner of Internal Revenue, 14 SCRA 832, No. L-
being the case, donative intent is presumed present when one 19865 July 31, 1965
gives a part of one’s patrimony to another without consideration.
Taxation; Expenditure Method; The government is allowed to Court of Tax Appeals; Appeals; To leave undetermined the mode of
resort to all evidence or resources available to determine a appeal from the Secretary of Finance would be an injustice to
taxpayer’s income and to use methods to reconstruct his income. A taxpayers prejudiced by his adverse rulings. To remedy this
method commonly used by the government is the expenditure situation, the Supreme Court (SC) implies from the purpose of
method, which is a method of reconstructing a taxpayer’s income Republic Act (RA) No. 1125 and its amendatory laws that the Court
by deducting the aggregate yearly expenditures from the declared of Tax Appeals (CTA) is the proper forum with which to institute
yearly income.—In the case of income, for it to be taxable, there the appeal.—To leave undetermined the mode of appeal from the
must be a gain realized or received by the taxpayer, which is not Secretary of Finance would be an injustice to taxpayers prejudiced
excluded by law or treaty from taxation. The government is by his adverse rulings. To remedy this situation, We imply from the
allowed to resort to all evidence or resources available to purpose of RA 1125 and its amendatory laws that the CTA is the
determine a taxpayer’s income and to use methods to reconstruct proper forum with which to institute the appeal. This is not, and
his income. A method commonly used by the government is the should not, in any way, be taken as a derogation of the power of
expenditure method, which is a method of reconstructing a the Office of President but merely as recognition that matters
taxpayer’s income by deducting the aggregate yearly expenditures calling for technical knowledge should be handled by the agency or
from the declared yearly income. The theory of this method is that quasi-judicial body with specialization over the controversy. As the
when the amount of the money that a taxpayer spends during a specialized quasi-judicial agency mandated to adjudicate tax,
given year exceeds his reported or declared income and the source customs, and assessment cases, there can be no other court of
of such money is unexplained, it may be inferred that such appellate jurisdiction that can decide the issues raised in the CA
expenditures represent unreported or undeclared income. petition, which involves the tax treatment of the shares of stocks
sold.
Same; It is a basic concept in taxation that income denotes a flow
of wealth during a definite period of time, while capital is a fund or Same; Same; Certiorari; In the recent case of City of Manila v.
property existing at one distinct point in time.—Respondent Grecia-Cuerdo, 715 SCRA 182 (2014), the Supreme Court (SC) En
spouses’ defense that they had sufficient savings to purchase the Banc has ruled that the Court of Tax Appeals (CTA) now has the
properties remains self-serving at this point since they have not power of certiorari in cases within its appellate jurisdiction.—In the
yet presented any evidence to support this. And since there is no recent case of City of Manila v. Grecia-Cuerdo, 715 SCRA 182
evidence yet to suggest that the money they used to buy the (2014), the Court En Banc has ruled that the CTA now has the
properties was from an existing fund, it is safe to assume that that power of certiorari in cases within its appellate jurisdiction.
money is income or a flow of wealth other than a mere return on
capital. It is a basic concept in taxation that income denotes a flow Taxation; Donor’s Tax; The absence of donative intent, if that be
of wealth during a definite period of time, while capital is a fund or the case, does not exempt the sales of stock transaction from
property existing at one distinct point in time. Moreover, by just donor’s tax since Sec. 100 of the National Internal Revenue Code
looking at the tables presented by petitioner, there is a manifest (NIRC) categorically states that the amount by which the fair
showing that respondent spouses had underdeclared their income. market value of the property exceeded the value of the
The huge disparity between respondent Antonio’s reported or consideration shall be deemed a gift.—Petitioner’s substantive
declared annual income for the past several years and respondent arguments are unavailing. The absence of donative intent, if that
spouses’ cash acquisitions for the years 2000, 2001, and 2003 be the case, does not exempt the sales of stock transaction from
cannot be ignored. In fact, it makes us wonder how they were able donor’s tax since Sec. 100 of the NIRC categorically states that the
to purchase the properties in cash given respondent Antonio’s amount by which the fair market value of the property exceeded
meager income. Bureau of Internal Revenue vs. Court of the value of the consideration shall be deemed a gift. Thus, even if
Appeals, 741 SCRA 536, G.R. No. 197590 November 24, there is no actual donation, the difference in price is considered a
2014 donation by fiction of law. Moreover, Sec. 7(c.2.2) of RR 06-08
does not alter Sec. 100 of the NIRC but merely sets the
parameters for determining the “fair market value” of a sale of
stocks. Such issuance was made pursuant to the Commissioner’s Same; Same; When goods (e.g., petroleum and petroleum
power to interpret tax laws and to promulgate rules and products) are brought into a Freeport Economic Zone (FEZ), the
regulations for their implementation. Philippine American Life goods remain to be in foreign territory and are not therefore goods
and General Insurance Company vs. Secretary of Finance, introduced into Philippine customs territory subject to Philippine
741 SCRA 578, G.R. No. 210987 November 24, 2014 customs and tax laws.—We find it clear from all these that when
goods (e.g., petroleum and petroleum products) are brought into
Taxation; Tax Exemptions; Bureau of Internal Revenue; Revenue an FEZ, the goods remain to be in foreign territory and are not
Regulation (RR) No. 2-2012 is invalid and unconstitutional therefore goods introduced into Philippine customs territory subject
because: a) it illegally imposes taxes upon Freeport Economic Zone to Philippine customs and tax laws.
(FEZ) enterprises, which, by law, enjoy tax-exempt status, and b)
it effectively amends the law and thereby encroaches upon the Same; Same; Goods brought into and traded within a Freeport
legislative authority reserved exclusively by the Constitution for Economic Zone (FEZ) are generally beyond the reach of national
Congress.—On the merits of the case, we rule that RR 2-2012 is internal revenue taxes and customs duties enforced in the
invalid and unconstitutional because: a) it illegally imposes taxes Philippine customs territory.—Stated differently, goods brought into
upon FEZ enterprises, which, by law, enjoy tax-exempt status, and and traded within an FEZ are generally beyond the reach of
b) it effectively amends the law (i.e., RA 7227, as amended by RA national internal revenue taxes and customs duties enforced in the
9400) and thereby encroaches upon the legislative authority Philippine customs territory. This is consistent with the incentive
reserved exclusively by the Constitution for Congress. granted to FEZs exempting the importation itself from taxes and
duties.
Same; Same; The tax exemption enjoyed by Freeport Economic
Zone (FEZ) enterprises covers internal revenue taxes imposed on Same; Same; The act of bringing the goods into a Freeport
goods brought into the FEZ, including the Clark FEZ, such as value- Economic Zone (FEZ) is not a taxable importation. As long as the
added tax (VAT) and excise tax.—In line with this comprehensive goods remain in the FEZ or reexported to another foreign
interpretation, we rule that the tax exemption enjoyed by FEZ jurisdiction, they shall continue to be tax-free.—Therefore, the act
enterprises covers internal revenue taxes imposed on goods of bringing the goods into an FEZ is not a taxable importation. As
brought into the FEZ, including the Clark FEZ, such as VAT and long as the goods remain (e.g., sale and/or consumption of the
excise tax. article within the FEZ) in the FEZ or reexported to another foreign
jurisdiction, they shall continue to be tax-free. However, once the
Same; Same; Since the tax exemptions enjoyed by Freeport goods are introduced into the Philippine customs territory, it ceases
Economic Zone (FEZ) enterprises under the law extend even to to enjoy the tax privileges accorded to FEZs. It shall then be
value-added tax (VAT) and excise tax, it follows that the taxes considered as an importation subject to all applicable national
imposed by Section 3 of Revenue Regulation (RR) No. 2-2012 internal revenue taxes and customs duties.
directly contravene these exemptions.—Since the tax exemptions
enjoyed by FEZ enterprises under the law extend even to VAT and Same; Same; The exemption from taxes and duties under Republic
excise tax, as we discussed above, it follows and we accordingly Act (RA) No. 9400 are granted not only to importations into the
rule that the taxes imposed by Section 3 of Revenue Regulation Freeport Economic Zone (FEZ), but also specifically to each FEZ
(RR) No. 2-2012 directly contravene these exemptions. First, the enterprise.—FEZ enterprises bringing goods into the FEZ should
regulation erroneously considers petroleum and petroleum not be considered as importers subject to tax in the same manner
products brought into a FEZ as taxable importations. Second, it that the very act of bringing goods into these special territories
unreasonably burdens FEZ enterprises by making them pay the does not make them taxable importations. We emphasize that the
corresponding taxes — an obligation from which the law specifically exemption from taxes and duties under RA 9400 are granted not
exempts them — even if there is a subsequent opportunity to only to importations into the FEZ, but also specifically to each FEZ
refund the payments made. enterprise.
Same; Same; When the law speaks of a tax exemption, it should repacking of goods” and should be zero-rated.—Respondent is a
be understood as freedom from the imposition and payment of a VAT-registered person that facilitates the collection and payment of
particular tax.—The essence of a tax exemption is the immunity or receivables belonging to its non-resident foreign client, for which it
freedom from a charge or burden to which others are subjected. It gets paid in acceptable foreign currency inwardly remitted and
is a waiver of the government’s right to collect the amounts that accounted for in conformity with BSP rules and regulations.
would have been collectible under our tax laws. Thus, when the law Certainly, the service it renders in the Philippines is not in the
speaks of a tax exemption, it should be understood as freedom same category as “processing, manufacturing or repacking of
from the imposition and payment of a particular tax. goods” and should, therefore, be zero-rated. In reply to a query of
respondent, the BIR opined in VAT Ruling No. 080-89 that the
Same; Same; To limit the tax-free importation privilege of Freeport income respondent earned from its parent company’s regional
Economic Zone (FEZ) enterprises by requiring them to pay subject operating centers (ROCs) was automatically zero-rated effective
to a refund clearly runs counter to the Legislature’s intent to create January 1, 1988.
a free port where the “free flow of goods or capital within, into, and
out of the zones” is ensured.—Tax exemptions are granted for Same; Same; The VAT is a tax on consumption “expressed as a
specific public interests that the Legislature considers sufficient to percentage of the value added to goods or services” purchased by
offset the monetary loss in the grant of exemptions. To limit the the producer or taxpayer.—The VAT is a tax on consumption
tax-free importation privilege of FEZ enterprises by requiring them “expressed as a percentage of the value added to goods or
to pay subject to a refund clearly runs counter to the Legislature’s services” purchased by the producer or taxpayer. As an indirect tax
intent to create a free port where the “free flow of goods or capital on services, its main object is the transaction itself or, more
within, into, and out of the zones” is ensured. concretely, the performance of all kinds of services conducted in
the course of trade or business in the Philippines. These services
Same; Same; The power to tax includes the power to grant tax must be regularly conducted in this country; undertaken in “pursuit
exemptions.—Finally, the State’s inherent power to tax is vested of a commercial or an economic activity;” for a valuable
exclusively in the Legislature. We have since ruled that the power consideration; and not exempt under the Tax Code, other special
to tax includes the power to grant tax exemptions. Thus, the laws, or any international agreement.
imposition of taxes, as well as the grant and withdrawal of tax
exemptions, shall only be valid pursuant to a legislative enactment. Same; Same; As a general rule, the VAT system uses the
Purisima vs. Lazatin, 811 SCRA 205, G.R. No. 210588 destination principle as a basis for the jurisdictional reach of the
November 29, 2016 tax.—As a general rule, the VAT system uses the destination
principle as a basis for the jurisdictional reach of the tax. Goods
Taxation; Value-Added Tax; Services performed by VAT-registered and services are taxed only in the country where they are
persons in the Philippines (other than the processing, consumed. Thus, exports are zero-rated, while imports are taxed.
manufacturing or repacking of goods for persons doing business
outside the Philippines) when paid in acceptable foreign currency Same; Same; The law clearly provides for an exception to the
and accounted for in accordance with the rules and regulations of destination principle.—The law clearly provides for an exception to
the BSP, are zero-rated.—Under the last paragraph quoted above, the destination principle; that is, for a zero percent VAT rate for
services performed by VAT-registered persons in the Philippines services that are performed in the Philippines, “paid for in
(other than the processing, manufacturing or repacking of goods acceptable foreign currency and accounted for in accordance with
for persons doing business outside the Philippines), when paid in the rules and regulations of the [BSP].” Thus, for the supply of
acceptable foreign currency and accounted for in accordance with service to be zero-rated as an exception, the law merely requires
the rules and regulations of the BSP, are zero-rated. that first, the service be performed in the Philippines; second, the
service fall under any of the categories in Section 102(b) of the Tax
Same; Same; Services rendered by respondent in the Philippines is Code; and, third,it be paid in acceptable foreign currency
not in the same category as “processing, manufacturing or accounted for in accordance with BSP rules and regulations.
Same; Same; Same; Zero-rated transactions generally refer to the
Same; Same; The place where the service is rendered determines export sale of goods and supply of services.—Zero-rated
the jurisdiction to impose the VAT; The place of payment is transactions generally refer to the export sale of goods and supply
immaterial; much less is the place where the output of the service of services. The tax rate is set at zero. When applied to the tax
will be further or ultimately used.—The law neither makes a base, such rate obviously results in no tax chargeable against the
qualification nor adds a condition in determining the tax situs of a purchaser. The seller of such transactions charges no output tax,
zero-rated service. Under this criterion, the place where the service but can claim a refund of or a tax credit certificate for the VAT
is rendered determines the jurisdiction to impose the VAT. previously charged by suppliers.
Performed in the Philippines, such service is necessarily subject to
its jurisdiction, for the State necessarily has to have “a substantial Same; Same; Same; Respondent as an exempt entity, can neither
connection” to it, in order to enforce a zero rate. The place of be directly charged for the VAT on its sales nor indirectly made to
payment is immaterial; much less is the place where the output of bear as added cost to such sales, the equivalent VAT on its
the service will be further or ultimately used. Commissioner of purchases.—Applying the special laws we have earlier discussed,
Internal Revenue vs. American Express International, Inc. respondent as an entity is exempt from internal revenue laws and
(Philippine Branch), 462 SCRA 197, G.R. No. 152609 June regulations. This exemption covers both direct and indirect taxes,
29, 2005 stemming from the very nature of the VAT as a tax on
consumption, for which the direct liability is imposed on one person
Taxation; Tax Exemption; Value Added Tax (VAT); Petitioner is not but the indirect burden is passed on to another. Respondent, as an
subject to internal revenue laws and regulations and is even exempt entity, can neither be directly charged for the VAT on its
entitled to tax credits.—From the above-cited laws, it is sales nor indirectly made to bear, as added cost to such sales, the
immediately clear that petitioner enjoys preferential tax treatment. equivalent VAT on its purchases. Ubi lex non distinguit, nec nos
It is not subject to internal revenue laws and regulations and is distinguere debemus. Where the law does not distinguish, we
even entitled to tax credits. The VAT on capital goods is an internal ought not to distinguish.
revenue tax from which petitioner as an entity is exempt. Although
the transactions involving such tax are not exempt, petitioner as a Same; Same; Same; Tax Refunds; Claimants of tax refunds bear
VAT-registered person, however, is entitled to their credits. the burden of proving the factual basis of their claims; and of
showing, by words too plain to be mistaken, that the legislature
Same; Same; Same; The VAT is an indirect tax that may be shifted intended to exempt them.—Tax refunds are in the nature of such
or passed on to the buyer, transferee or lessee of the goods, exemptions. Accordingly, the claimants of those refunds bear the
properties or services.—Viewed broadly, the VAT is a uniform tax burden of proving the factual basis of their claims; and of showing,
ranging, at present, from 0 percent to 10 percent levied on every by words too plain to be mistaken, that the legislature intended to
importation of goods, whether or not in the course of trade or exempt them. In the present case, all the cited legal provisions are
business, or imposed on each sale, barter, exchange or lease of teeming with life with respect to the grant of tax exemptions too
goods or properties or on each rendition of services in the course vivid to pass unnoticed. In addition, respondent easily meets the
of trade or business as they pass along the production and challenge. Commissioner of Internal Revenue vs. Seagate
distribution chain, the tax being limited only to the value added to Technology (Philippines), 451 SCRA 132, G.R. No. 153866
such goods, properties or services by the seller, transferor or February 11, 2005
lessor. It is an indirect tax that may be shifted or passed on to the
buyer, transferee or lessee of the goods, properties or services. As Taxation; Tax Refund; Tax Credit; As pronounced in Silicon
such, it should be understood not in the context of the person or Philippines, Inc. v. Commissioner of Internal Revenue, 754 SCRA
entity that is primarily, directly and legally liable for its payment, 279 (2015), the exception to the mandatory and jurisdictional
but in terms of its nature as a tax on consumption. In either case, compliance with the 120+30-day period is when the claim for the
though, the same conclusion is arrived at. tax refund or credit was filed in the period between December 10,
2003 and October 5, 2010 during which Bureau of Intenal Revenue
(BIR) Ruling No. DA-489-03 was still in effect.—As pronounced in should be the suppliers, not the petitioner. In view of the foregoing
Silicon Philippines, Inc. v. Commissioner of Internal Revenue, 754 considerations, the Court must uphold the rejection of the appeal
SCRA 279 (2015), the exception to the mandatory and of the petitioner. This Court has repeatedly pointed out that a claim
jurisdictional compliance with the 120+30-day period is when the for tax refund or credit is similar to a tax exemption and should be
claim for the tax refund or credit was filed in the period between strictly construed against the taxpayer. The burden of proof to
December 10, 2003 and October 5, 2010 during which BIR Ruling show that he is ultimately entitled to the grant of such tax refund
No. DA-489-03 was still in effect. Accordingly, the premature filing or credit rests on the taxpayer. Sadly, the petitioner has not
of the judicial claim was allowed, giving to the CTA jurisdiction over discharged its burden. Coral Bay Nickel Corporation vs.
the appeal. Commissioner of Internal Revenue, 793 SCRA 190, G.R. No.
190506 June 13, 2016
Same; Cross Border Doctrine; Destination Principle; With the
issuance of Revenue Memorandum Circular (RMC) No. 74-99, the Taxation; Value-Added Tax; Tax Credits; Tax Refunds; Any VAT-
distinction under the old rule was disregarded and the new circular registered person, whose sales are zero-rated or effectively zero-
took into consideration the two (2) important principles of the rated may, within two (2) years after the close of the taxable
Philippine Value-Added Tax (VAT) system: the Cross Border quarter when the sales were made, apply for the issuance of a tax
Doctrine and the Destination Principle.—With the issuance of RMC credit certificate or refund of creditable input tax due or paid
74-99, the distinction under the old rule was disregarded and the attributable to such sales.—In determining whether the
new circular took into consideration the two important principles of administrative claims of Mindanao I and Mindanao II for 2003 have
the Philippine VAT system: the Cross Border Doctrine and the prescribed, we see no need to rely on either Atlas or Mirant.
Destination Principle. Section 112(A) of the 1997 Tax Code is clear: “[A]ny VAT-
registered person, whose sales are zero-rated or effectively zero-
Same; Value-Added Tax; No Value-Added Tax (VAT) shall be rated may, within two (2) years after the close of the taxable
imposed to form part of the cost of goods destined for consumption quarter when the sales were made, apply for the issuance of a tax
outside of the territorial border of the taxing authority.—Section 8 credit certificate or refund of creditable input tax due or paid
of Republic Act No. 7916 mandates that PEZA shall manage and attributable to such sales x x x.”
operate the ECOZONE as a separate customs territory. The
provision thereby establishes the fiction that an ECOZONE is a Same; Same; Same; Same; In case of full or partial denial of the
foreign territory separate and distinct from the customs territory. claim for tax refund or tax credit, or the failure on the part of the
Accordingly, the sales made by suppliers from a customs territory Commissioner to act on the application within the period prescribed
to a purchaser located within an ECOZONE will be considered as above, the taxpayer affected may, within thirty (30) days from the
exportations. Following the Philippine VAT system’s adherence to receipt of the decision denying the claim or after the expiration of
the Cross Border Doctrine and Destination Principle, the VAT the one hundred twenty day-period, appeal the decision or the
implications are that “no VAT shall be imposed to form part of the unacted claim with the Court of Tax Appeals.—In determining
cost of goods destined for consumption outside of the territorial whether the claims for the second, third and fourth quarters of
border of the taxing authority.” 2003 have been properly appealed, we still see no need to refer to
either Atlas or Mirant, or even to Section 229 of the 1997 Tax
Same; Tax Refund; Tax Credit; A claim for tax refund or credit is Code. The second paragraph of Section 112(C) of the 1997 Tax
similar to a tax exemption and should be strictly construed against Code is clear: “In case of full or partial denial of the claim for tax
the taxpayer.—We should also take into consideration the nature of refund or tax credit, or the failure on the part of the Commissioner
VAT as an indirect tax. Although the seller is statutorily liable for to act on the application within the period prescribed above, the
the payment of VAT, the amount of the tax is allowed to be shifted taxpayer affected may, within thirty (30) days from the receipt of
or passed on to the buyer. However, reporting and remittance of the decision denying the claim or after the expiration of the one
the VAT paid to the BIR remained to be the seller/supplier’s hundred twenty day-period, appeal the decision or the unacted
obligation. Hence, the proper party to seek the tax refund or credit claim with the Court of Tax Appeals.”
follow that an isolated transaction cannot be an incidental
Same; Court of Tax Appeals; The taxpayer cannot simply file a transaction for purposes of VAT liability. Indeed, a reading of
petition with the Court of Tax Appeals without waiting for the Section 105 of the 1997 Tax Code would show that a transaction
Commissioner’s decision within the 120-day mandatory and “in the course of trade or business” includes “transactions
jurisdictional period.—In the consolidated cases of San Roque, the incidental thereto.” Mindanao II’s business is to convert the steam
Court En Banc examined and ruled on the different claims for tax supplied to it by PNOC-EDC into electricity and to deliver the
refund or credit of three different companies. In San Roque, we electricity to NPC. In the course of its business, Mindanao II bought
reiterated that “[f]ollowing the verba legis doctrine, [Section and eventually sold a Nissan Patrol. Prior to the sale, the Nissan
112(C)] must be applied exactly as worded since it is clear, plain, Patrol was part of Mindanao II’s property, plant, and equipment.
and unequivocal. The taxpayer cannot simply file a petition with Therefore, the sale of the Nissan Patrol is an incidental transaction
the CTA without waiting for the Commissioner’s decision within the made in the course of Mindanao II’s business which should be
120-day mandatory and jurisdictional period. The CTA will have no liable for VAT. Mindanao II Geothermal Partnership vs.
jurisdiction because there will be no ‘decision’ or ‘deemed a denial Commissioner of Internal Revenue, 693 SCRA 49, G.R. No.
decision’ of the Commissioner for the CTA to review.” 193301 March 11, 2013

Same; Summary of the Rules on the Determination of the Taxation; Value Added Tax is a tax on transactions, imposed at
Prescriptive Period for Filing a Tax Refund or Credit of Unutilized every stage of the distribution process on the sale, barter,
Input Value Added Tax (VAT) as Provided in Section 112 of the exchange of goods or property, and on the performance of
1997 Tax Code.—We summarize the rules on the determination of services, even in the absence of profit attributable thereto.—
the prescriptive period for filing a tax refund or credit of unutilized Contrary to COMASERCO’s contention the above provision clarifies
input VAT as provided in Section 112 of the 1997 Tax Code, as that even a non-stock, nonprofit, organization or government
follows: (1) An administrative claim must be filed with the CIR entity, is liable to pay VAT on the sale of goods or services. VAT is
within two years after the close of the taxable quarter when the a tax on transactions, imposed at every stage of the distribution
zero-rated or effectively zero-rated sales were made. (2) The CIR process on the sale, barter, exchange of goods or property, and on
has 120 days from the date of submission of complete documents the performance of services, even in the absence of profit
in support of the administrative claim within which to decide attributable thereto. The term “in the course of trade or business”
whether to grant a refund or issue a tax credit certificate. The 120- requires the regular conduct or pursuit of a commercial or an
day period may extend beyond the two-year period from the filing economic activity, regardless of whether or not the entity is profit-
of the administrative claim if the claim is filed in the later part of oriented.
the two-year period. If the 120-day period expires without any
decision from the CIR, then the administrative claim may be Same; Even a nonstock, nonprofit organization or government
considered to be denied by inaction. (3) A judicial claim must be entity is liable to pay Value Added Tax for the sale of goods and
filed with the CTA within 30 days from the receipt of the CIR’s services.—The definition of the term “in the course of trade or
decision denying the administrative claim or from the expiration of business” incorporated in the present law applies to all transactions
the 120-day period without any action from the CIR. (4) All even to those made prior to its enactment. Executive Order No.
taxpayers, however, can rely on BIR Ruling No. DA-489-03 from 273 stated that any person who, in the course of trade or business,
the time of its issuance on 10 December 2003 up to its reversal by sells, barters or exchanges goods and services, was already liable
this Court in Aichi on 6 October 2010, as an exception to the to pay VAT. The present law merely stresses that even a nonstock,
mandatory and jurisdictional 120+30 day periods. nonprofit organization or government entity is liable to pay VAT for
the sale of goods and services.
Same; A reading of Section 105 of the 1997 Tax Code would show
that a transaction “in the course of trade or business” includes Same; Definition of the phrase “sale of services.”—Section 108 of
“transactions incidental thereto.”—Mindanao II’s sale of the Nissan the National Internal Revenue Code of 1997 defines the phrase
Patrol is said to be an isolated transaction. However, it does not “sale of services” as the “performance of all kinds of services for
others for a fee, remuneration or consideration.” It includes “the pointed out by the Commissioner, the performance of all kinds of
supply of technical advice, assistance or services rendered in services for others for a fee, remuneration or consideration is
connection with technical management or administration of any considered as sale of services subject to VAT. As the government
scientific, industrial or commercial undertaking or project.” agency charged with the enforcement of the law, the opinion of the
Commissioner of Internal Revenue, in the absence of any showing
Same; Even if such corporation was organized without any that it is plainly wrong, is entitled to great weight. Commissioner
intention of realizing pro fit, any income or profit generated by the of Internal Revenue vs. Court of Appeals, 329 SCRA 237,
entity in the conduct of its activities was subject to income tax.— G.R. No. 125355 March 30, 2000
On February 5, 1998, the Commissioner of Internal Revenue issued
BIR Ruling No. 010-98 emphasizing that a domestic corporation Taxation; Assessment; Letter of Authority (LOA); A Letter of
that provided technical, research, management and technical Authority or (LOA) is the authority given to the appropriate
assistance to its affiliated companies and received payments on a revenue officer assigned to perform assessment functions.—Based
reimbursement-of-cost basis, without any intention of realizing on Section 13 of the Tax Code, a Letter of Authority or LOA is the
profit, was subject to VAT on services rendered. In fact, even if authority given to the appropriate revenue officer assigned to
such corporation was organized without any intention of realizing perform assessment functions. It empowers or enables said
profit, any income or profit generated by the entity in the conduct revenue officer to examine the books of account and other
of its activities was subject to income tax. accounting records of a taxpayer for the purpose of collecting the
correct amount of tax. The very provision of the Tax Code that the
Same; As long as the entity provides service for a fee, CIR relies on is unequivocal with regard to its power to grant
remuneration or consideration, then the service rendered is subject authority to examine and assess a taxpayer.
to Value Added Tax.—It is immaterial whether the primary purpose
of a corporation indicates that it receives payments for services Same; Same; Same; In the absence of such an authority, the
rendered to its affiliates on a reimbursement-on-cost basis only, assessment or examination is a nullity.—There must be a grant of
without realizing profit, for purposes of determining liability for VAT authority before any revenue officer can conduct an examination or
on services rendered. As long as the entity provides service for a assessment. Equally important is that the revenue officer so
fee, remuneration or consideration, then the service rendered is authorized must not go beyond the authority given. In the absence
subject to VAT. of such an authority, the assessment or examination is a nullity.

Same; Any exemption from the payment of a tax must be clearly Same; Same; It is evident under Section 110 of the 1997 Tax Code
stated in the language of the law.—It is a rule that because taxes that an advertising expense duly covered by a Value Added Tax
are the lifeblood of the nation, statutes that allow exemptions are (VAT) invoice is a legitimate business expense.—The Court is not
construed strictly against the grantee and liberally in favor of the persuaded. As aptly found by the CTA-First Division and later
government. Otherwise stated, any exemption from the payment affirmed by the CTA-EB, Sony’s deficiency VAT assessment
of a tax must be clearly stated in the language of the law; it cannot stemmed from the CIR’s disallowance of the input VAT credits that
be merely implied therefrom. In the case of VAT, Section 109, should have been realized from the advertising expense of the
Republic Act 8424 clearly enumerates the transactions exempted latter. It is evident under Section 110 of the 1997 Tax Code that an
from VAT. The services rendered by COMASERCO do not fall within advertising expense duly covered by a VAT invoice is a legitimate
the exemptions. business expense. This is confirmed by no less than CIR’s own
witness, Revenue Officer Antonio Aluquin. There is also no denying
Same; Opinion of the Commissioner of Internal Revenue entitled to that Sony incurred advertising expense. Aluquin testified that
great weight in the absence of any showing that it is plainly advertising companies issued invoices in the name of Sony and the
wrong.—Both the Commissioner of Internal Revenue and the Court latter paid for the same. Indubitably, Sony incurred and paid for
of Tax Appeals correctly ruled that the services rendered by advertising expense/
COMASERCO to Philamlife and its affiliates are subject to VAT. As
services. Where the money came from is another matter all 1997 Annual Corporate Income Tax Returns, where respondent
together but will definitely not change said fact. specified that it was availing of the tax relief under E.O. No. 226.
Hence, respondent is not exempt from VAT and it correctly
Same; Same; Value Added Tax (VAT); Services rendered for a fee registered itself as a VAT taxpayer. In fine, it is engaged in taxable
even on reimbursement-on-cost basis only and without realizing rather than exempt transactions.
profit are also subject to Value Added Tax (VAT).—In the case of
CIR v. Court of Appeals (CA), 329 SCRA 237 (2000), the Court had Same; Same; Words and Phrases; Taxable transactions are those
the occasion to rule that services rendered for a fee even on transactions which are subject to value-added tax either at the rate
reimbursement-on-cost basis only and without realizing profit are of 10% or 0%, and the seller shall be entitled to tax credit for the
also subject to VAT. The case, however, is not applicable to the value-added tax paid on purchases and leases of goods, properties
present case. In that case, COMASERCO rendered service to its or services; An exemption means that the sale of goods, properties
affiliates and, in turn, the affiliates paid the former reimbursement- or services and the use or lease of properties is not subject to VAT
on-cost which means that it was paid the cost or expense that it (output tax) and the seller is not allowed any tax credit on VAT
incurred although without profit. This is not true in the present (input tax) previously paid; A VAT-registered purchaser of goods,
case. Sony did not render any service to SIS at all. The services properties or services that are VAT-exempt, is not entitled to any
rendered by the advertising companies, paid for by Sony using SIS input tax on such purchases despite the issuance of a VAT invoice
dole-out, were for Sony and not SIS. SIS just gave assistance to or receipt.—Taxable transactions are those transactions which are
Sony in the amount equivalent to the latter’s advertising expense subject to value-added tax either at the rate of ten percent (10%)
but never received any goods, properties or service from Sony. or zero percent (0%). In taxable transactions, the seller shall be
Commissioner of Internal Revenue vs. Sony Philippines, entitled to tax credit for the value-added tax paid on purchases and
Inc., 635 SCRA 234, G.R. No. 178697 November 17, 2010 leases of goods, properties or services. An exemption means that
the sale of goods, properties or services and the use or lease of
Taxation; Value-Added Tax (VAT); Under the fiscal incentives properties is not subject to VAT (output tax) and the seller is not
granted to PEZA-registered enterprises under Sec. 23 of R.A. No. allowed any tax credit on VAT (input tax) previously paid. The
7916, the taxpayer had two options with respect to its tax person making the exempt sale of goods, properties or services
burden—it could avail of an income tax holiday pursuant to shall not bill any output tax to his customers because the said
provisions of E.O. No. 226, thus exempt it from income taxes for a transaction is not subject to VAT. Thus, a VAT-registered purchaser
number of years but not from other internal revenue taxes such as of goods, properties or services that are VAT-exempt, is not
VAT, or it could avail of the tax exemptions on all taxes, including entitled to any input tax on such purchases despite the issuance of
VAT under P.D. No. 66 and pay only the preferential tax rate of 5% a VAT invoice or receipt.
under R.A. No. 7916.—Petitioner’s contention that respondent is
not entitled to refund for being exempt from VAT is untenable. This Same; Same; Under the value-added tax system, a zero-rated sale
argument turns a blind eye to the fiscal incentives granted to by a VAT-registered person, which is a taxable transaction for VAT
PEZA-registered enterprises under Section 23 of Rep. Act No. purposes, shall not result in any output tax, but the input tax on
7916. Note that under said statute, the respondent had two his purchase of goods, properties or services related to such zero-
options with respect to its tax burden. It could avail of an income rated sale shall be available as tax credit or refund.—Now, having
tax holiday pursuant to provisions of E.O. No. 226, thus exempt it determined that respondent is engaged in taxable transactions
from income taxes for a number of years but not from other subject to VAT, let us then proceed to determine whether it is
internal revenue taxes such as VAT; or it could avail of the tax subject to 10% or zero (0%) rate of VAT. To begin with, it must be
exemptions on all taxes, including VAT under P.D. No. 66 and pay recalled that generally, sale of goods and supply of services
only the preferential tax rate of 5% under Rep. Act No. 7916. Both performed in the Philippines are taxable at the rate of 10%.
the Court of Appeals and the Court of Tax Appeals found that However, export sales, or sales outside the Philippines, shall be
respondent availed of the income tax holiday for four (4) years subject to value-added tax at 0% if made by a VAT-registered
starting from August 7, 1995, as clearly reflected in its 1996 and person. Under the value-added tax system, a zero-rated sale by a
VAT-registered person, which is a taxable transaction for VAT tax exemption, partake of the nature of an exemption.—We have
purposes, shall not result in any output tax. However, the input tax consistently ruled that claims for tax refunds, when based on
on his purchase of goods, properties or services related to such statutes granting tax exemption, partake of the nature of an
zero-rated sale shall be available as tax credit or refund. exemption. Tax refunds and exemptions are exceptions rather than
the rule and for this reason are highly disfavored. Hence, in
Same; Same; In principle, the purpose of applying a zero percent evaluating a claim for refund, the rule of strict interpretation
(0%) rate on a taxable transaction is to exempt the transaction applies. This rule requires the claimant to prove not only his
completely from VAT previously collected on inputs.—In principle, entitlement to a refund, but also his due observance of the
the purpose of applying a zero percent (0%) rate on a taxable reglementary periods within which he must file his administrative
transaction is to exempt the transaction completely from VAT and judicial claims for refund. Noncompliance with these
previously collected on inputs. It is thus the only true way to substantive and procedural due process requirements results in the
ensure that goods are provided free of VAT. While the zero rating denial of the claim. It is then essential for us to discuss each
and the exemption are computationally the same, they actually requirement and evaluate whether these have been duly complied
differ in several aspects, to wit: (a) A zero-rated sale is a taxable with in the present case.
transaction but does not result in an output tax while an exempted
transaction is not subject to the output tax; (b) The input VAT on Same; Same; Timeliness of the filing of the claim is mandatory and
the purchases of a VAT-registered person with zero-rated sales jurisdictional. The court cannot take cognizance of a judicial claim
may be allowed as tax credits or refunded while the seller in an for refund filed either prematurely or out of time.—UCSFA-MPC’s
exempt transaction is not entitled to any input tax on his purchases claim for refund — grounded as it is on payments of advance VAT
despite the issuance of a VAT invoice or receipt; (c) Persons alleged to have been illegally and erroneously collected from
engaged in transactions which are zero-rated, being subject to November 15, 2007 to February 13, 2009 — is governed by
VAT, are required to register while registration is optional for VAT- Sections 204(C) and 229 of the NIRC. These provisions are clear:
exempt persons. within two years from the date of payment of tax, the claimant
must first file an administrative claim with the CIR before filing its
Same; Same; Court of Tax Appeals; The Supreme Court will not judicial claim with the courts of law. Both claims must be filed
set aside lightly the conclusions reached by the Court of Tax within a two-year reglementary period. Timeliness of the filing of
Appeals which, by the very nature of its functions, is dedicated the claim is mandatory and jurisdictional. The court cannot take
exclusively to the resolution of tax problems and has accordingly cognizance of a judicial claim for refund filed either prematurely or
developed an expertise on the subject, unless there has been an out of time.
abuse or improvident exercise of authority.—The Supreme Court
will not set aside lightly the conclusions reached by the Court of Same; Same; If the claimant asserts that he should be refunded
Tax Appeals which, by the very nature of its functions, is dedicated the amount of tax he has previously paid because he is exempted
exclusively to the resolution of tax problems and has accordingly from paying the tax, he must point to the specific legal provision of
developed an expertise on the subject, unless there has been an law granting him the exemption.—As mentioned, the rule on strict
abuse or improvident exercise of authority. In this case, we find no interpretation requires the claimant to sufficiently establish his
cogent reason to deviate from this well-entrenched principle. Thus, entitlement to a tax refund. If the claimant asserts that he should
we are persuaded that indeed the Court of Appeals committed no be refunded the amount of tax he has previously paid because he
reversible error in affirming the assailed ruling of the Court of Tax is exempted from paying the tax, he must point to the specific
Appeals. Commissioner of Internal Revenue vs. Cebu Toyo legal provision of law granting him the exemption. His right cannot
Corporation, 451 SCRA 447, G.R. No. 149073 February 16, be based on mere implication. In this case, the cooperative claims
2005 that it is exempted — based on Section 61 of R.A. 6938 and
Section 109(l) of the NIRC — from paying advance VAT when it
Taxation; Tax Refunds; The Supreme Court (SC) has consistently withdraws refined sugar from the refinery/mill as required by RR
ruled that claims for tax refunds, when based on statutes granting No. 6-2007. UCSFA-MPC thus alleges that the amounts of advance
VAT it paid under protest from November 15, 2007 to February 13, Same; Same; Sales Tax; Agricultural Cooperatives; The value-
2009, were illegally and erroneously collected. added tax (VAT)-exempt nature of the sales made by agricultural
cooperatives under the National Internal Revenue Code (NIRC) is
Same; Value-Added Tax; Certain transactions are exempted from consistent with the tax exemptions granted to qualified
the imposition of value-added tax (VAT). One exempted cooperatives under the Cooperative Code which grants
transaction is the sale of agricultural food products in their original cooperatives exemption from sales tax on transactions with
state. Agricultural food products that have undergone simple members and nonmembers.—With the UCSFA-MPC established as
processes of preparation or preservation for the market are a duly registered cooperative and the producer of sugar cane, its
nevertheless considered to be in their original state.—As a general sale of refined sugar is exempt from VAT, whether the sale is made
rule under the NIRC, a seller shall be liable for VAT on the sale of to members or to nonmembers. The VAT-exempt nature of the
goods or properties based on the gross selling price or gross value sales made by agricultural cooperatives under the NIRC is
in money of the thing sold. However, certain transactions are consistent with the tax exemptions granted to qualified
exempted from the imposition of VAT. One exempted transaction is cooperatives under the Cooperative Code which grants
the sale of agricultural food products in their original state. cooperatives exemption from sales tax on transactions with
Agricultural food products that have undergone simple processes of members and nonmembers. These conclusions reduce the issue in
preparation or preservation for the market are nevertheless the case to whether the granted exemption also covers the
considered to be in their original state. Sugar is an agricultural food payment of advance VAT upon withdrawal of refined sugar from
product. Notably, tax regulations differentiate between raw sugar the refinery or mill.
and refined sugar.
Same; Same; Same; Persons liable for value-added tax (VAT) on
Same; Same; For internal revenue purposes, the sale of raw cane the sale of goods shall pay the VAT due, in general, on a monthly
sugar is exempt from value-added tax (VAT) because it is basis. VAT accruing from the sale of goods in the current month
considered to be in its original state. On the other hand, refined shall be payable the following month. However, there are instances
sugar is an agricultural product that can no longer be considered to where VAT is required to be paid in advance, such as in the sale of
be in its original state because it has undergone the refining refined sugar.—Persons liable for VAT on the sale of goods shall
process; its sale is thus subject to VAT.—For internal revenue pay the VAT due, in general, on a monthly basis. VAT accruing
purposes, the sale of raw cane sugar is exempt from VAT because from the sale of goods in the current month shall be payable the
it is considered to be in its original state. On the other hand, following month. However, there are instances where VAT is
refined sugar is an agricultural product that can no longer be required to be paid in advance, such as in the sale of refined sugar.
considered to be in its original state because it has undergone the To specifically address the policies and procedures governing the
refining process; its sale is thus subject to VAT. Although the sale advance payment of VAT on the sale of refined sugar, RR Nos. 6-
of refined sugar is generally subject to VAT, such transaction may 2007 and 13-2008 were issued.
nevertheless qualify as a VAT-exempt transaction if the sale is
made by a cooperative. Under Section 109(l) of the NIRC, sales by Same; Same; Same; The transaction subject to value-added tax
agricultural cooperatives are exempt from VAT provided the (VAT) is still the sale of refined sugar. The withdrawal of sugar is
following conditions concur, viz.: First, the seller must be an not a separate transaction subject to VAT. It is only the payment
agricultural cooperative duly registered with the CDA. An thereof that is required to be made in advance.—The VAT
agricultural cooperative is “duly registered” when it has been implications of the withdrawal of refined sugar from the sugar
issued a certificate of registration by the CDA. This certificate is refinery/mill and the actual sale of refined sugar are different.
conclusive evidence of its registration. Second, the cooperative While the sale is the actual transaction upon which VAT is imposed,
must sell either: 1) exclusively to its members; or 2) to both the withdrawal gives rise to the obligation to pay the VAT due,
members and nonmembers, its produce, whether in its original albeit in advance. Therefore, the requirement for the advance
state or processed form. payment of VAT for refined sugar creates a special situation: While
the transaction giving rise to the imposition of VAT — the actual
sale of refined sugar — has not yet taken place, the VAT that would additional documents beyond what is required by the law; the
be due from the subsequent sale is, nonetheless, already required taxpayer-claimant should enjoy the exemption it has, by law,
to be paid earlier, which is before the withdrawal of the goods from always been entitled to. Hence, once the cooperative has
the sugar refinery/mill. To be clear, the transaction subject to VAT sufficiently shown that it has satisfied the requirements under
is still the sale of refined sugar. The withdrawal of sugar is not a Section 109(l) of the NIRC for the exemption from VAT on its sale
separate transaction subject to VAT. It is only the payment thereof of refined sugar (i.e., that it is duly registered with the CDA and it
that is required to be made in advance. is the producer of the sugar cane from which refined sugar is
derived), its exemption from the advance payment of VAT should
Same; Same; Same; Tax Exemptions; The sale of refined sugar by automatically be granted and recognized.
an agricultural cooperative duly registered with the Cooperative
Development Authority (CDA) is exempt from value-added tax Same; Same; Same; Same; The basic rule is that if any Bureau of
(VAT).—In sum, the sale of refined sugar by an agricultural Internal Revenue (BIR) ruling or issuance promulgated by the
cooperative duly registered with the CDA is exempt from VAT. A Commissioner of Internal Revenue (CIR) is subsequently revoked
qualified cooperative also enjoys exemption from the requirement or nullified by the CIR herself or by the court, the
of advance payment of VAT upon withdrawal from the refinery/mill. revocation/nulli-fication cannot be applied retroactively to the
The agricultural cooperative’s exemption from the requirement of prejudice of the taxpayers.—The basic rule is that if any BIR ruling
advance payment is a logical consequence of the exemption from or issuance promulgated by the CIR is subsequently revoked or
VAT of its sales of refined sugar. nullified by the CIR herself or by the court, the
revocation/nullification cannot be applied retroactively to the
Same; Same; Same; Same; Certificate of Tax Exemption; Words prejudice of the taxpayers. Hence, even if we consider that the CIR
and Phrases; Article 2(d) of the Cooperative Code defines a had revoked the rulings previously issued in favor of UCSFA-MPC
certificate of tax exemption as “the ruling granting exemption to upon the filing of her answer, it cannot effectively deprive UCSFA-
the cooperative” issued by the Bureau of Internal Revenue (BIR).— MPC of its rights under the rulings prior to their revocation.
Article 2(d) of the Cooperative Code defines a certificate of tax Commissioner of Internal Revenue vs. United Cadiz
exemption as “the ruling granting exemption to the cooperative” Sugar<br/>Farmers Association Multi-Purpose Cooperative,
issued by the BIR. In turn, under RR No. 20-2001, the cooperative 813 SCRA 345, G.R. No. 209776 December 7, 2016
shall file a letter-application for the issuance of certificate of tax
exemption, attaching thereto its certificates of registration and Taxation; Value Added Tax (VAT); Republic Act No. 7716 clarifies
good standing duly issued by the CDA. The certificate of tax that it is the real properties “held primarily for sale to customers or
exemption shall remain valid so long as the cooperative is “in good held for lease in the ordinary course of trade or business” that are
standing” as ascertained by the CDA. subject to the Value-Added Tax (VAT), and not when the real
estate transactions are engaged in by persons who do not sell or
Same; Same; Same; Same; Same; Once the cooperative has lease properties in the ordinary course of trade or business.—Rep.
sufficiently shown that it has satisfied the requirements under Act No. 7716 clarifies that it is the real properties “held primarily
Section 109(l) of the National Internal Revenue Code (NIRC) for for sale to customers or held for lease in the ordinary course of
the exemption from value-added tax (VAT) on its sale of refined trade or business” that are subject to the VAT, and not when the
sugar (i.e., that it is duly registered with the Cooperative real estate transactions are engaged in by persons who do not sell
Development Authority [CDA] and it is the producer of the sugar or lease properties in the ordinary course of trade or business. It is
cane from which refined sugar is derived), its exemption from the clear that those regularly engaged in the real estate business are
advance payment of VAT should automatically be granted and accorded the same treatment as the merchants of other goods or
recognized.—We must remember that regulations may not enlarge, properties available in the market. In the same way that a milliner
alter, or restrict the provisions of the law it administers; it cannot considers hats as his goods and a rancher considers cattle as his
engraft additional requirements not contemplated by the goods, a real estate dealer holds real property, whether or not it
legislature. A taxpayer-claimant should not be required to submit contains improvements, as his goods. Had Section 100 itself
supplied any differentiation between the treatment of real from not being a VAT-registered person to becoming a VAT-
properties or real estate dealers and the treatment of the registered person. Such transition does not take place merely by
transactions involving other commercial goods, then such differing operation of law, E.O. No. 273 or Rep. Act No. 7716 in particular. It
treatment would have constituted the statutory basis for the CIR to could also occur when one decides to start a business. Section 105
engage in such differentiation which said respondent did seek to states that the transitional input tax credits become available
accomplish in this case through Section 4.105-1 of RR 7-95. Yet either to (1) a person who becomes liable to VAT; or (2) any
the amendments introduced by Rep. Act No. 7716 to Section 100, person who elects to be VAT-registered. The clear language of the
coupled with the fact that the said law left Section 105 intact, law entitles new trades or businesses to avail of the tax credit once
reveal the lack of any legislative intention to make persons or they become VAT-registered. The transitional input tax credit,
entities in the real estate business subject to a VAT treatment whether under the Old NIRC or the New NIRC, may be claimed by
different from those engaged in the sale of other goods or a newly-VAT registered person such as when a business as it
properties or in any other commercial trade or business. commences operations. If we view the matter from the perspective
of a starting entrepreneur, greater clarity emerges on the
Same; Same; Transitional Input Tax Credit; If indeed the continued utility of the transitional input tax credit.
transitional input tax credit is integrally related to previously paid
sales taxes, the purported causal link between those two would Same; Same; Same; It is apparent that the transitional input tax
have been nonetheless extinguished long ago, yet Congress has credit operates to benefit newly Value-Added Tax (VAT)-registered
reenacted the transitional input tax credit several times, which fact persons, whether or not they previously paid taxes in the
simply belies the absence of any relationship between such tax acquisition of their beginning inventory of goods, materials and
credit and the long-abolished sales taxes.—Section 25 of E.O. No. supplies.—The interpretation proffered by the CTA would exclude
273 perfectly remedies the problem assumed by the CTA as the goods and properties which are acquired through sale not in the
basis for the introduction of transitional input tax credit in 1987. If ordinary course of trade or business, donation or through
the core purpose of the tax credit is only, as hinted by the CTA, to succession, from the beginning inventory on which the transitional
allow for some mode of accreditation of previously-paid sales input tax credit is based. This prospect all but highlights the
taxes, then Section 25 alone would have sufficed. Yet E.O. No. 273 ultimate absurdity of the respondents’ position. Again, nothing in
amended the Old NIRC itself by providing for the transitional input the Old NIRC (or even the New NIRC) speaks of such a possibility
tax credit under Section 105, thereby assuring that the tax credit or qualifies the previous payment of VAT or any other taxes on the
would endure long after the last goods made subject to sales tax goods, materials and supplies as a pre-requisite for inclusion in the
have been consumed. If indeed the transitional input tax credit is beginning inventory. It is apparent that the transitional input tax
integrally related to previously paid sales taxes, the purported credit operates to benefit newly VAT-registered persons, whether
causal link between those two would have been nonetheless or not they previously paid taxes in the acquisition of their
extinguished long ago. Yet Congress has reenacted the transitional beginning inventory of goods, materials and supplies. During that
input tax credit several times; that fact simply belies the absence period of transition from non-VAT to VAT status, the transitional
of any relationship between such tax credit and the long-abolished input tax credit serves to alleviate the impact of the VAT on the
sales taxes. Obviously then, the purpose behind the transitional taxpayer. At the very beginning, the VAT-registered taxpayer is
input tax credit is not confined to the transition from sales tax to obliged to remit a significant portion of the income it derived from
VAT. its sales as output VAT. The transitional input tax credit mitigates
this initial diminution of the taxpayer’s income by affording the
Same; Same; Same; There is hardly any constricted definition of opportunity to offset the losses incurred through the remittance of
“transitional” that will limit its possible meaning to the shift from the output VAT at a stage when the person is yet unable to credit
the sales tax regime to the Value-Added Tax (VAT) regime.—There input VAT payments.
is hardly any constricted definition of “transitional” that will limit its
possible meaning to the shift from the sales tax regime to the VAT Same; Same; Same; All tax laws in general, are designed to
regime. Indeed, it could also allude to the transition one undergoes enforce uniform tax treatment to persons or classes of persons who
share minimum legislated standards.—The CTA harped on the Court of Tax Appeals claimed that under Section 105 of the Old
circumstance that FBDC was excused from paying any tax on the NIRC the basis for the inventory of goods, materials and supplies
purchase of its properties from the national government, even upon which the transitional input VAT would be based “shall be left
claiming that to allow the transitional input tax credit is to regulation by the appropriate administrative authority.” This is
“tantamount to giving an undeserved bonus to real estate dealers based on the phrase “filing of an inventory as prescribed by
similarly situated as [FBDC] which the Government cannot afford regulations” found in Section 105. Nonetheless, Section 105 does
to provide.” Yet the tax laws in question, and all tax laws in include the particular properties to be included in the inventory,
general, are designed to enforce uniform tax treatment to persons namely goods, materials and supplies. It is questionable whether
or classes of persons who share minimum legislated standards. The the CIR has the power to actually redefine the concept of “goods,”
common standard for the application of the transitional input tax as she did when she excluded real properties from the class of
credit, as enacted by E.O. No. 273 and all subsequent tax laws goods which real estate companies in the business of selling real
which reinforced or reintegrated the tax credit, is simply that the properties may include in their inventory. The authority to
taxpayer in question has become liable to VAT or has elected to be prescribe regulations can pertain to more technical matters, such
a VAT-registered person. E.O. No. 273 and the subsequent tax as how to appraise the value of the inventory or what papers need
laws are all decidedly neutral and accommodating in ascertaining to be filed to properly itemize the contents of such inventory. But
who should be entitled to the tax credit, and it behooves the CIR such authority cannot go as far as to amend Section 105 itself,
and the CTA to adopt a similarly judicious perspective. which the Commissioner had unfortunately accomplished in this
case. It is of course axiomatic that a rule or regulation must bear
Same; Same; Same; Words and Phrases; Goods, as commonly upon, and be consistent with, the provisions of the enabling statute
understood in the business sense, refers to the product which the if such rule or regulation is to be valid. In case of conflict between
Value-Added Tax (VAT)-registered person offers for sale to the a statute and an administrative order, the former must prevail.
public, and with respect to real estate dealers, it is the real Indeed, the CIR has no power to limit the meaning and coverage of
properties themselves which constitute their “goods.”—Under the term “goods” in Section 105 of the Old NIRC absent statutory
Section 105, the beginning inventory of “goods” forms part of the authority or basis to make and justify such limitation. A contrary
valuation of the transitional input tax credit. Goods, as commonly conclusion would mean the CIR could very well moot the law or
understood in the business sense, refers to the product which the arrogate legislative authority unto himself by retaining sole
VAT-registered person offers for sale to the public. With respect to discretion to provide the definition and scope of the term “goods.”
real estate dealers, it is the real properties themselves which
constitute their “goods.” Such real properties are the operating Same; Same; Transitional Input Tax Credit; Presumptive Input Tax
assets of the real estate dealer. Section 4.100-1 of RR No. 7-95 Credit; Legal Research; Words and Phrases; As with the
itself includes in its enumeration of “goods or properties” such “real transitional input tax credit, the presumptive input tax credit is
properties held primarily for sale to customers or held for lease in creditable against the output Value-Added Tax (VAT), having come
the ordinary course of trade or business.” Said definition was taken into existence in our tax structure only after the introduction of the
from the very statutory language of Section 100 of the Old NIRC. Value-Added Tax (VAT); It was only in 1997, or eleven years after
By limiting the definition of goods to “improvements” in Section the Value-Added Tax (VAT) was first introduced, that the
4.105-1, the BIR not only contravened the definition of “goods” as presumptive input tax credit was first incorporated in the National
provided in the Old NIRC, but also the definition which the same Internal Revenue Code (NIRC), more particularly in Section 111(B)
revenue regulation itself has provided. of the New NIRC; Clearly, for more than a decade now, the term
“presumptive input tax credit” has contemplated a particularly
Same; Same; Administrative Law; The authority to prescribe idiosyncratic tax credit far divorced from its original usage in the
regulations can pertain to more technical matters, such as how to transitory provisions of E.O. No. 273.—Let us clarify the distinction
appraise the value of the inventory or what papers need to be filed between the presumptive input tax credit and the transitional input
to properly itemize the contents of such inventory, but such tax credit. As with the transitional input tax credit, the presumptive
authority cannot go as far as to amend Section 105 itself.—The input tax credit is creditable against the output VAT. It necessarily
has come into existence in our tax structure only after the on Section 13 of the Tax Code, a Letter of Authority or LOA is the
introduction of the VAT. As quoted earlier, E.O. No. 273 provided authority given to the appropriate revenue officer assigned to
for a “presumptive input tax credit” as one of the transitory perform assessment functions. It empowers or enables said
measures in the shift from sales taxes to VAT, but such revenue officer to examine the books of account and other
presumptive input tax credit was never integrated in the NIRC accounting records of a taxpayer for the purpose of collecting the
itself. It was only in 1997, or eleven years after the VAT was first correct amount of tax. The very provision of the Tax Code that the
introduced, that the presumptive input tax credit was first CIR relies on is unequivocal with regard to its power to grant
incorporated in the NIRC, more particularly in Section 111(B) of authority to examine and assess a taxpayer.
the New NIRC. As borne out by the text of the provision, it is plain
that the presumptive input tax credit is highly limited in application Same; Same; Same; In the absence of such an authority, the
as it may be claimed only by “persons or firms engaged in the assessment or examination is a nullity.—There must be a grant of
processing of sardines, mackerel and milk, and in manufacturing authority before any revenue officer can conduct an examination or
refined sugar and cooking oil;” and “public works contractors.” assessment. Equally important is that the revenue officer so
Clearly, for more than a decade now, the term “presumptive input authorized must not go beyond the authority given. In the absence
tax credit” has contemplated a particularly idiosyncratic tax credit of such an authority, the assessment or examination is a nullity.
far divorced from its original usage in the transitory provisions of
E.O. No. 273. There is utterly no sense then in latching on to the Same; Same; It is evident under Section 110 of the 1997 Tax Code
term as having any significant meaning for the purpose of the that an advertising expense duly covered by a Value Added Tax
cases at bar. Fort Bonifacio Development Corporation vs. (VAT) invoice is a legitimate business expense.—The Court is not
Commissioner of Internal Revenue, 583 SCRA 168, G.R. No. persuaded. As aptly found by the CTA-First Division and later
158885 April 2, 2009 affirmed by the CTA-EB, Sony’s deficiency VAT assessment
stemmed from the CIR’s disallowance of the input VAT credits that
Taxation; Value-Added Tax (VAT); Transitional Input Tax Credit; should have been realized from the advertising expense of the
Prior payment of taxes is not required to avail of the transitional latter. It is evident under Section 110 of the 1997 Tax Code that an
input tax credit because it is not a tax refund per se but a tax advertising expense duly covered by a VAT invoice is a legitimate
credit.—Prior payment of taxes is not required to avail of the business expense. This is confirmed by no less than CIR’s own
transitional input tax credit because it is not a tax refund per se witness, Revenue Officer Antonio Aluquin. There is also no denying
but a tax credit. Tax credit is not synonymous to tax refund. Tax that Sony incurred advertising expense. Aluquin testified that
refund is defined as the money that a taxpayer overpaid and is advertising companies issued invoices in the name of Sony and the
thus returned by the taxing authority. Tax credit, on the other latter paid for the same. Indubitably, Sony incurred and paid for
hand, is an amount subtracted directly from one’s total tax liability. advertising expense/
It is any amount given to a taxpayer as a subsidy, a refund, or an services. Where the money came from is another matter all
incentive to encourage investment. Thus, unlike a tax refund, prior together but will definitely not change said fact.
payment of taxes is not a prerequisite to avail of a tax credit. In
fact, in Commissioner of Internal Revenue v. Central Luzon Drug Same; Same; Value Added Tax (VAT); Services rendered for a fee
Corp., 456 SCRA 414 (2005), we declared that prior payment of even on reimbursement-on-cost basis only and without realizing
taxes is not required in order to avail of a tax credit. Fort profit are also subject to Value Added Tax (VAT).—In the case of
Bonifacio Development Corp. vs. Commissioner of Internal CIR v. Court of Appeals (CA), 329 SCRA 237 (2000), the Court had
Revenue, 679 SCRA 566, G.R. No. 173425 September 4, the occasion to rule that services rendered for a fee even on
2012 reimbursement-on-cost basis only and without realizing profit are
also subject to VAT. The case, however, is not applicable to the
Taxation; Assessment; Letter of Authority (LOA); A Letter of present case. In that case, COMASERCO rendered service to its
Authority or (LOA) is the authority given to the appropriate affiliates and, in turn, the affiliates paid the former reimbursement-
revenue officer assigned to perform assessment functions.—Based on-cost which means that it was paid the cost or expense that it
incurred although without profit. This is not true in the present types of input VAT credits. One is a credit/refund of input VAT
case. Sony did not render any service to SIS at all. The services attributable to zero-rated sales under Section 112 (A) of the NIRC,
rendered by the advertising companies, paid for by Sony using SIS and the other is a credit/refund of input VAT on capital goods
dole-out, were for Sony and not SIS. SIS just gave assistance to pursuant to Section 112 (B) of the same Code. In a claim for
Sony in the amount equivalent to the latter’s advertising expense credit/refund of input VAT attributable to zero-rated sales, Section
but never received any goods, properties or service from Sony. 112 (A) of the NIRC lays down four requisites, to wit: 1) the
Commissioner of Internal Revenue vs. Sony Philippines, taxpayer must be VAT-registered; 2) the taxpayer must be
Inc., 635 SCRA 234, G.R. No. 178697 November 17, 2010 engaged in sales which are zero-rated or effectively zero-rated; 3)
the claim must be filed within two years after the close of the
Taxation; Value Added Tax; Failure to print words “zero-rated taxable quarter when such sales were made; and 4) the creditable
sales” on receipts fatal to claim for refund of value-added tax input tax due or paid must be attributable to such sales, except the
(VAT).—Section 4.108-1 of RR 7-95 proceeds from the rule-making transitional input tax, to the extent that such input tax has not
authority granted to the Secretary of Finance under Section 245 of been applied against the output tax.
the 1977 NIRC (Presidential Decree 1158) for the efficient
enforcement of the tax code and of course its amendments. The Same; Same; Failure to print the word “zero-rated” on the sales
requirement is reasonable and is in accord with the efficient invoices or receipts is fatal to a claim for credit/refund of input
collection of VAT from the covered sales of goods and services. As Value Added Tax (VAT) on zero-rated sales.—All told, the non-
aptly explained by the CTA’s First Division, the appearance of the presentation of the ATP and the failure to indicate the word “zero-
word “zero-rated” on the face of invoices covering zero-rated sales rated” in the invoices or receipts are fatal to a claim for
prevents buyers from falsely claiming input VAT from their credit/refund of input VAT on zero-rated sales. The failure to
purchases when no VAT was actually paid. If, absent such word, a indicate the ATP in the sales invoices or receipts, on the other
successful claim for input VAT is made, the government would be hand, is not. In this case, petitioner failed to present its ATP and to
refunding money it did not collect. Further, the printing of the word print the word “zero-rated” on its export sales invoices. Thus, we
“zero-rated” on the invoice helps segregate sales that are subject find no error on the part of the CTA in denying outright petitioner’s
to 10% (now 12%) VAT from those sales that are zero-rated. claim for credit/refund of input VAT attributable to its zero-rated
Unable to submit the proper invoices, petitioner Panasonic has sales.
been unable to substantiate its claim for refund.
Same; Same; Words and Phrases; “Capital goods or properties”
Same; Same; Failure to print the word “zero-rated” on the refer to goods or properties with estimated useful life greater that
invoices/receipts is fatal to a claim for credit/refund of input value- one year and which are treated as depreciable assets.—To claim a
added tax (VAT) on zero-rated sales.—Consistent with the refund of input VAT on capital goods, Section 112 (B) of the NIRC
foregoing jurisprudence, petitioner’s claim for credit/refund of input requires that: 1. the claimant must be a VAT registered person; 2.
VAT for the taxable quarters of 2000 must be denied. Failure to the input taxes claimed must have been paid on capital goods; 3.
print the word “zero-rated” on the invoices/receipts is fatal to a the input taxes must not have been applied against any output tax
claim for credit/refund of input VAT on zero-rated sales. J.R.A. liability; and 4. the administrative claim for refund must have been
Philippines, Inc. vs. Commissioner of Internal Revenue, 632 filed within two (2) years after the close of the taxable quarter
SCRA 517, G.R. No. 177127 October 11, 2010 when the importation or purchase was made. Corollarily, Section
4.106-1 (b) of RR No. 7-95 defines capital goods as follows:
Taxation; Value Added Tax; There are two types of input Value “Capital goods or properties” refer to goods or properties with
Added Tax (VAT) credits. One is a credit/refund of input VAT estimated useful life greater that one year and which are treated as
attributable to zero-rated sales under Section 112 (A) of the depreciable assets under Section 29 (f), used directly or indirectly
National Internal Revenue Code (NIRC), and the other is a in the production or sale of taxable goods or services. Silicon
credit/refund of input Value Added Tax (VAT) on capital goods Philippines, Inc. vs. Commissioner Internal Revenue, 639
pursuant to Section 112 (B) of the same Code.—Before us are two SCRA 521, G.R. No. 172378 January 17, 2011
Taxation; Value Added Tax (VAT); Prescription; Tax Refunds; should appeal the decision or inaction of the CIR.—There is nothing
Section 112(A) of the National Internal Revenue Code (NIRC) is the in Section 112 of the NIRC to support respondent’s view.
applicable provision in determining the start of the two-year period Subsection (A) of the said provision states that “any VAT-
for claiming a refund/credit of unutilized input Value Added Tax registered person, whose sales are zero-rated or effectively zero-
(VAT), and that Sections 204(C) and 229 of the NIRC are rated may, within two years after the close of the taxable quarter
inapplicable as “both provisions apply only to instances of when the sales were made, apply for the issuance of a tax credit
erroneous payment or illegal collection of internal revenue certificate or refund of creditable input tax due or paid attributable
taxes.”—The pivotal question of when to reckon the running of the to such sales.” The phrase “within two (2) years x x x apply for the
two-year prescriptive period, however, has already been resolved issuance of a tax credit certificate or refund” refers to applications
in Commissioner of Internal Revenue v. Mirant Pagbilao for refund/credit filed with the CIR and not to appeals made to the
Corporation, 565 SCRA 154 (2008), where we ruled that Section CTA. This is apparent in the first paragraph of subsection (D) of the
112(A) of the NIRC is the applicable provision in determining the same provision, which states that the CIR has “120 days from the
start of the two-year period for claiming a refund/credit of submission of complete documents in support of the application
unutilized input VAT, and that Sections 204(C) and 229 of the NIRC filed in accordance with Subsections (A) and (B)” within which to
are inapplicable as “both provisions apply only to instances of decide on the claim. In fact, applying the two-year period to
erroneous payment or illegal collection of internal revenue taxes.” judicial claims would render nugatory Section 112(D) of the NIRC,
which already provides for a specific period within which a taxpayer
Same; Same; Same; Where the taxpayer did not wait for the should appeal the decision or inaction of the CIR. The second
decision of the Commission of Internal Revenue or the lapse of the paragraph of Section 112(D) of the NIRC envisions two scenarios:
120-day period, it having simultaneously filed the administrative (1) when a decision is issued by the CIR before the lapse of the
and the judicial claims, the filing of said judicial claim with the 120-day period; and (2) when no decision is made after the 120-
Court of Tax Appeals is premature.—Section 112(D) of the NIRC day period. In both instances, the taxpayer has 30 days within
clearly provides that the CIR has “120 days, from the date of the which to file an appeal with the CTA. As we see it then, the 120-
submission of the complete documents in support of the application day period is crucial in filing an appeal with the CTA.
[for tax refund/credit],” within which to grant or deny the claim. In Commissioner of Internal Revenue vs. Aichi Forging
case of full or partial denial by the CIR, the taxpayer’s recourse is Company of Asia, Inc., 632 SCRA 422, G.R. No. 184823
to file an appeal before the CTA within 30 days from receipt of the October 6, 2010
decision of the CIR. However, if after the 120-day period the CIR
fails to act on the application for tax refund/credit, the remedy of Taxation; Tax Refund; Tax Credit; Waiting Period; It is indisputable
the taxpayer is to appeal the inaction of the CIR to CTA within 30 that compliance with the 120-day waiting period is mandatory and
days. In this case, the administrative and the judicial claims were jurisdictional. The waiting period, originally fixed at 60 days only,
simultaneously filed on September 30, 2004. Obviously, was part of the provisions of the first Value-Added Tax (VAT) law,
respondent did not wait for the decision of the CIR or the lapse of Executive Order No. 273, which took effect on 1 January 1988. The
the 120-day period. For this reason, we find the filing of the judicial waiting period was extended to 120 days effective 1 January 1998
claim with the CTA premature. under RA 8424 or the Tax Reform Act of 1997.—Clearly, San Roque
failed to comply with the 120-day waiting period, the time
Same; Same; Same; Words and Phrases; The phrase “within two expressly given by law to the Commissioner to decide whether to
(2) years x x x apply for the issuance of a tax credit certificate or grant or deny San Roque’s application for tax refund or credit. It is
refund” in Section 112(A) of the National Internal Revenue Code indisputable that compliance with the 120-day waiting period is
(NIRC) refers to applications for refund/credit filed with the mandatory and jurisdictional. The waiting period, originally fixed at
Commission of Internal Revenue (CIR) and not to appeals made to 60 days only, was part of the provisions of the first VAT law,
the Court of Tax Appeals (CTA)—applying the two-year period to Executive Order No. 273, which took effect on 1 January 1988. The
judicial claims would render nugatory Section 112(D) of the NIRC, waiting period was extended to 120 days effective 1 January 1998
which already provides for a specific period within which a taxpayer under RA 8424 or the Tax Reform Act of 1997. Thus, the waiting
period has been in our statute books for more than fifteen (15) is otherwise meritorious, particularly in claims for tax refunds or
years before San Roque filed its judicial claim. Failure to comply credit. Such precedent will render meaningless compliance with
with the 120-day waiting period violates a mandatory provision of mandatory and jurisdictional requirements, for then every tax
law. It violates the doctrine of exhaustion of administrative refund case will have to be decided on the numerical correctness of
remedies and renders the petition premature and thus without a the amounts claimed, regardless of non-compliance with
cause of action, with the effect that the CTA does not acquire mandatory and jurisdictional conditions.
jurisdiction over the taxpayer’s petition. Philippine jurisprudence is
replete with cases upholding and reiterating these doctrinal Same; Appeals; The taxpayer may, if he wishes, appeal the
principles. decision of the Commissioner to the Court of Tax Appeals within 30
days from receipt of the Commissioner’s decision, or if the
Same; Court of Tax Appeals; Jurisdiction; The charter of the Court Commissioner does not act on the taxpayer’s claim within the 120-
of Tax Appeals expressly provides that its jurisdiction is to review day period, the taxpayer may appeal to the Court of Tax Appeals
on appeal decisions of the Commissioner of Internal Revenue in within 30 days from the expiration of the 120-day period.—Section
cases involving refunds of internal revenue taxes.—The charter of 112(C) also expressly grants the taxpayer a 30-day period to
the CTA expressly provides that its jurisdiction is to review on appeal to the CTA the decision or inaction of the Commissioner,
appeal “decisions of the Commissioner of Internal Revenue in cases thus: x x x the taxpayer affected may, within thirty (30) days from
involving x x x refunds of internal revenue taxes.” When a taxpayer the receipt of the decision denying the claim or after the expiration
prematurely files a judicial claim for tax refund or credit with the of the one hundred twenty day-period, appeal the decision or the
CTA without waiting for the decision of the Commissioner, there is unacted claim with the Court of Tax Appeals. (Emphasis supplied)
no “decision” of the Commissioner to review and thus the CTA as a This law is clear, plain, and unequivocal. Following the well-settled
court of special jurisdiction has no jurisdiction over the appeal. The verba legis doctrine, this law should be applied exactly as worded
charter of the CTA also expressly provides that if the Commissioner since it is clear, plain, and unequivocal. As this law states, the
fails to decide within “a specific period” required by law, such taxpayer may, if he wishes, appeal the decision of the
“inaction shall be deemed a denial” of the application for tax refund Commissioner to the CTA within 30 days from receipt of the
or credit. It is the Commissioner’s decision, or inaction “deemed a Commissioner’s decision, or if the Commissioner does not act on
denial,” that the taxpayer can take to the CTA for review. Without the taxpayer’s claim within the 120-day period, the taxpayer may
a decision or an “inaction x x x deemed a denial” of the appeal to the CTA within 30 days from the expiration of the 120-
Commissioner, the CTA has no jurisdiction over a petition for day period.
review.
Same; Tax Refund; Tax Credit; The taxpayer may, within two (2)
Taxation; Tax Refund; Tax Credit; The Supreme Court should not years after the close of the taxable quarter when the sales were
establish the precedent that non-compliance with mandatory and made, apply for the issuance of a tax credit certificate or refund of
jurisdictional conditions can be excused if the claim is otherwise the creditable input tax due or paid to such sales.—Section 112(A)
meritorious, particularly in claims for tax refunds or credit.—This clearly, plainly, and unequivocally provides that the taxpayer “may,
Court cannot disregard mandatory and jurisdictional conditions within two (2) years after the close of the taxable quarter when the
mandated by law simply because the Commissioner chose not to sales were made, apply for the issuance of a tax credit certificate
contest the numerical correctness of the claim for tax refund or or refund of the creditable input tax due or paid to such sales.” In
credit of the taxpayer. Non-compliance with mandatory periods, short, the law states that the taxpayer may apply with the
non-observance of prescriptive periods, and non-adherence to Commissioner for a refund or credit “within two (2) years,” which
exhaustion of administrative remedies bar a taxpayer’s claim for means at anytime within two years. Thus, the application for
tax refund or credit, whether or not the Commissioner questions refund or credit may be filed by the taxpayer with the
the numerical correctness of the claim of the taxpayer. This Court Commissioner on the last day of the two-year prescriptive period
should not establish the precedent that non-compliance with and it will still strictly comply with the law. The two-year
mandatory and jurisdictional conditions can be excused if the claim prescriptive period is a grace period in favor of the taxpayer and he
can avail of the full period before his right to apply for a tax refund even if the taxpayer complied with the law by filing his
or credit is barred by prescription. administrative claim within the two-year prescriptive period.

Same; Same; Same; The two-year prescriptive period in Section Same; Value-Added Tax; Input Value-Added Tax (VAT); Words and
112(A) refers to the period within which the taxpayer can file an Phrases; The input Value-Added Tax (VAT) is a tax liability of, and
administrative claim for tax refund or credit. Stated otherwise, the legally paid by, a VAT-registered seller of goods, properties or
two-year prescriptive period does not refer to the filing of the services used as input by another VAT-registered person in the sale
judicial claim with the Court of Tax Appeals but to the filing of the of his own goods, properties, or services.—The input VAT is not
administrative claim with the Commissioner.—Section 112(C) “excessively” collected as understood under Section 229 because
provides that the Commissioner shall decide the application for at the time the input VAT is collected the amount paid is correct
refund or credit “within one hundred twenty (120) days from the and proper. The input VAT is a tax liability of, and legally paid by, a
date of submission of complete documents in support of the VAT-registered seller of goods, properties or services used as input
application filed in accordance with Subsection (A).” The reference by another VAT-registered person in the sale of his own goods,
in Section 112(C) of the submission of documents “in support of properties, or services. This tax liability is true even if the seller
the application filed in accordance with Subsection A” means that passes on the input VAT to the buyer as part of the purchase price.
the application in Section 112(A) is the administrative claim that The second VAT-registered person, who is not legally liable for the
the Commissioner must decide within the 120-day period. In short, input VAT, is the one who applies the input VAT as credit for his
the two-year prescriptive period in Section 112(A) refers to the own output VAT. If the input VAT is in fact “excessively” collected
period within which the taxpayer can file an administrative claim as understood under Section 229, then it is the first VAT-registered
for tax refund or credit. Stated otherwise, the two-year prescriptive person―the taxpayer who is legally liable and who is deemed to
period does not refer to the filing of the judicial claim with the CTA have legally paid for the input VAT―who can ask for a tax refund
but to the filing of the administrative claim with the Commissioner. or credit under Section 229 as an ordinary refund or credit outside
As held in Aichi, the “phrase ‘within two years x x x apply for the of the VAT System. In such event, the second VAT-registered
issuance of a tax credit or refund’ refers to applications for taxpayer will have no input VAT to offset against his own output
refund/credit with the CIR and not to appeals made to the CTA.” VAT.

Same; Same; Same; If the 30-day period, or any part of it, is Same; Same; For simplicity and efficiency in tax collection, the
required to fall within the two-year prescriptive period (equivalent Value-Added Tax (VAT) is imposed not just on the value added by
to 730 days), then the taxpayer must file his administrative claim the taxpayer, but on the entire selling price of his goods, properties
for refund or credit within the first 610 days of the two-year or services.—As its name implies, the Value-Added Tax system is a
prescriptive period.—If the 30-day period, or any part of it, is tax on the value added by the taxpayer in the chain of
required to fall within the two-year prescriptive period (equivalent transactions. For simplicity and efficiency in tax collection, the VAT
to 730 days), then the taxpayer must file his administrative claim is imposed not just on the value added by the taxpayer, but on the
for refund or credit within the first 610 days of the two-year entire selling price of his goods, properties or services. However,
prescriptive period. Otherwise, the filing of the administrative claim the taxpayer is allowed a refund or credit on the VAT previously
beyond the first 610 days will result in the appeal to the CTA being paid by those who sold him the inputs for his goods, properties, or
filed beyond the two-year prescriptive period. Thus, if the taxpayer services. The net effect is that the taxpayer pays the VAT only on
files his administrative claim on the 611th day, the Commissioner, the value that he adds to the goods, properties, or services that he
with his 120-day period, will have until the 731st day to decide the actually sells.
claim. If the Commissioner decides only on the 731st day, or does
not decide at all, the taxpayer can no longer file his judicial claim Same; Same; Input Value-Added Tax (VAT); A taxpayer can apply
with the CTA because the two-year prescriptive period (equivalent his input Value-Added Tax (VAT) only against his output VAT. The
to 730 days) has lapsed. The 30-day period granted by law to the only exception is when the taxpayer is expressly “zero-rated or
taxpayer to file an appeal before the CTA becomes utterly useless, effectively zero-rated” under the law, like companies generating
power through renewable sources of energy.―Under Section such “excessively” collected tax, and thus there will no longer be
110(B), a taxpayer can apply his input VAT only against his output any “excess” input VAT. This will upend the present VAT System as
VAT. The only exception is when the taxpayer is expressly “zero- we know it.
rated or effectively zero-rated” under the law, like companies
generating power through renewable sources of energy. Thus, a Same; Same; Same; A claim for tax refund or credit, like a claim
non zero-rated VAT-registered taxpayer who has no output VAT for tax exemption, is construed strictly against the taxpayer.―A
because he has no sales cannot claim a tax refund or credit of his claim for tax refund or credit, like a claim for tax exemption, is
unused input VAT under the VAT System. Even if the taxpayer has construed strictly against the taxpayer. One of the conditions for a
sales but his input VAT exceeds his output VAT, he cannot seek a judicial claim of refund or credit under the VAT System is
tax refund or credit of his “excess” input VAT under the VAT compliance with the 120+30 day mandatory and jurisdictional
System. He can only carry-over and apply his “excess” input VAT periods. Thus, strict compliance with the 120+30 day periods is
against his future output VAT. If such “excess” input VAT is an necessary for such a claim to prosper, whether before, during, or
“excessively” collected tax, the taxpayer should be able to seek a after the effectivity of the Atlas doctrine, except for the period from
refund or credit for such “excess” input VAT whether or not he has the issuance of BIR Ruling No. DA-489-03 on 10 December 2003 to
output VAT. The VAT System does not allow such refund or credit. 6 October 2010 when the Aichi doctrine was adopted, which again
Such “excess” input VAT is not an “excessively” collected tax under reinstated the 120+30 day periods as mandatory and jurisdictional.
Section 229. The “excess” input VAT is a correctly and properly
collected tax. However, such “excess” input VAT can be applied Same; A reversal of a Bureau of Internal Revenue (BIR) regulation
against the output VAT because the VAT is a tax imposed only on or ruling cannot adversely prejudice a taxpayer who in good faith
the value added by the taxpayer. If the input VAT is in fact relied on the BIR regulation or ruling prior to its reversal.— Since
“excessively” collected under Section 229, then it is the person the Commissioner has exclusive and original jurisdiction to
legally liable to pay the input VAT, not the person to whom the tax interpret tax laws, taxpayers acting in good faith should not be
was passed on as part of the purchase price and claiming credit for made to suffer for adhering to general interpretative rules of the
the input VAT under the VAT System, who can file the judicial claim Commissioner interpreting tax laws, should such interpretation
under Section 229. later turn out to be erroneous and be reversed by the
Commissioner or this Court. Indeed, Section 246 of the Tax Code
Same; Tax Refund; Tax Credit; It is clear that what can be expressly provides that a reversal of a BIR regulation or ruling
refunded or credited is a tax that is “erroneously, illegally, cannot adversely prejudice a taxpayer who in good faith relied on
excessively or in any manner wrongfully collected.”—From the plain the BIR regulation or ruling prior to its reversal.
text of Section 229, it is clear that what can be refunded or
credited is a tax that is “erroneously, x x x illegally, x x x Same; Statutory Construction; Taxpayers should not be prejudiced
excessively or in any manner wrongfully collected.” In short, there by an erroneous interpretation by the Commissioner, particularly
must be a wrongful payment because what is paid, or part of it, is on a difficult question of law.—Taxpayers should not be prejudiced
not legally due. As the Court held in Mirant, Section 229 should by an erroneous interpretation by the Commissioner, particularly
“apply only to instances of erroneous payment or illegal collection on a difficult question of law. The abandonment of the Atlas
of internal revenue taxes.” Erroneous or wrongful payment includes doctrine by Mirant and Aichi is proof that the reckoning of the
excessive payment because they all refer to payment of taxes not prescriptive periods for input VAT tax refund or credit is a difficult
legally due. Under the VAT System, there is no claim or issue that question of law. The abandonment of the Atlas doctrine did not
the “excess” input VAT is “excessively or in any manner wrongfully result in Atlas, or other taxpayers similarly situated, being made to
collected.” In fact, if the “excess” input VAT is an “excessively” return the tax refund or credit they received or could have received
collected tax under Section 229, then the taxpayer claiming to under Atlas prior to its abandonment. This Court is applying Mirant
apply such “excessively” collected input VAT to offset his output and Aichi prospectively. Absent fraud, bad faith or
VAT may have no legal basis to make such offsetting. The person misrepresentation, the reversal by this Court of a general
legally liable to pay the input VAT can claim a refund or credit for interpretative rule issued by the Commissioner, like the reversal of
a specific BIR ruling under Section 246, should also apply Same; Taxes are the lifeblood of the nation.—Taxes are the
prospectively. lifeblood of the nation. The Philippines has been struggling to
improve its tax efficiency collection for the longest time with
Same; Judgments; Court of Tax Appeals decisions do not minimal success. Consequently, the Philippines has suffered the
constitute precedents, and do not bind the Supreme Court or the economic adversities arising from poor tax collections, forcing the
public.—There is also the claim that there are numerous CTA government to continue borrowing to fund the budget deficits. This
decisions allegedly supporting the argument that the filing dates of Court cannot turn a blind eye to this economic malaise by being
the administrative and judicial claims are inconsequential, as long unduly liberal to taxpayers who do not comply with statutory
as they are within the two-year prescriptive period. Suffice it to requirements for tax refunds or credits. The tax refund claims in
state that CTA decisions do not constitute precedents, and do not the present cases are not a pittance. Many other companies stand
bind this Court or the public. That is why CTA decisions are to gain if this Court were to rule otherwise. The dissenting opinions
appealable to this Court, which may affirm, reverse or modify the will turn on its head the well-settled doctrine that tax refunds are
CTA decisions as the facts and the law may warrant. Only decisions strictly construed against the taxpayer. Commissioner of
of this Court constitute binding precedents, forming part of the Internal Revenue vs. San Roque Power Corporation, 690
Philippine legal system. SCRA 336, G.R. No. 187485 February 12, 2013

Same; Tax Refund; Tax Credit; Under the novel amendment Taxation; Tax Credit; Tax Refund; The Commissioner of Internal
introduced by RA 7716, mere inaction by the Commissioner during Revenue (CIR) has one hundred twenty (120) days from the date
the 60-day period is deemed a denial of the claim. Thus, Section of submission of complete documents to decide a claim for tax
4.106- 2(c) states that “if no action on the claim for tax credit or refund of creditable input taxes. The taxpayer may, within
refund/credit has been taken by the Commissioner after the sixty thirty (30) days from receipt of the denial of the claim or after the
(60) day period,” the taxpayer “may” already file the judicial claim expiration of the 120-day period, which is considered a “denial due
even long before the lapse of the two-year prescriptive period.— to inaction,” appeal the decision or unacted claim to the Court of
Under the novel amendment introduced by RA 7716, mere inaction Tax Appeals (CTA).—It is apparent that the CIR has 120 days from
by the Commissioner during the 60-day period is deemed a denial the date of submission of complete documents to decide a claim for
of the claim. Thus, Section 4.106-2(c) states that “if no action on tax credit or refund of creditable input taxes. The taxpayer may,
the claim for tax refund/credit has been taken by the within 30 days from receipt of the denial of the claim or after the
Commissioner after the sixty (60) day period,” the taxpayer “may” expiration of the 120-day period, which is considered a “denial due
already file the judicial claim even long before the lapse of the two- to inaction,” appeal the decision or unacted claim to the CTA. To be
year prescriptive period. Prior to the amendment by RA 7716, the clear, Section 112(C) categorically provides that the 120-day
taxpayer had to wait until the two-year prescriptive period was period is counted “from the date of submission of complete
about to expire if the Commissioner did not act on the claim. With documents in support of the application.” Contrary to this
the amendment by RA 7716, the taxpayer need not wait until the mandate, the CTA En Banc counted the running of the period from
two-year prescriptive period is about to expire before filing the the date the application for refund was filed or May 15, 2008, and,
judicial claim because mere inaction by the Commissioner during thus, ruled that the judicial claim was belatedly filed.
the 60-day period is deemed a denial of the claim. This is the
meaning of the phrase “but before the lapse of the two (2) year Same; Same; Same; The one hundred twenty (120)-day period
period” in Section 4.106-2(c). As Section 4.106- 2(c) reiterates granted to the Commissioner of Internal Revenue (CIR) to decide
that the judicial claim can be filed only “after the sixty (60) day the administrative claim under the Section 112 is primarily
period,” this period remains mandatory and jurisdictional. Clearly, intended to benefit the taxpayer, to ensure that his claim is
Section 4.106-2(c) did not amend Section 106(d) but merely decided judiciously and expeditiously.—Indeed, the 120-day period
faithfully implemented it. granted to the CIR to decide the administrative claim under the
Section 112 is primarily intended to benefit the taxpayer, to ensure
that his claim is decided judiciously and expeditiously. After all, the
sooner the taxpayer successfully processes his refund, the sooner has the burden to prove his cause of action. As such, he enjoys
can such resources be further reinvested to the business relative freedom to submit such evidence to prove his claim.
translating to greater efficiencies and productivities that would
ultimately uplift the general welfare. To allow the CIR to determine Same; Same; Same; Under Section 112(A) of the National Internal
the completeness of the documents submitted and, thus, dictate Revenue Code (NIRC), as amended by Republic Act (RA) No. 9337,
the running of the 120-day period, would undermine these a taxpayer has two (2) years, after the close of the taxable quarter
objectives, as it would provide the CIR the unbridled power to when the sales were made, to apply for the issuance of a tax credit
indefinitely delay the administrative claim, which would ultimately certificate or refund of creditable input tax due or paid attributable
prevent the filing of a judicial claim with the CTA. to such sales.—Under Section 112(A) of the NIRC, as amended by
R.A. No. 9337, a taxpayer has two (2) years, after the close of the
Same; Same; Same; For purposes of determining when the taxable quarter when the sales were made, to apply for the
supporting documents have been completed — it is the taxpayer issuance of a tax credit certificate or refund of creditable input tax
who ultimately determines when complete documents have been due or paid attributable to such sales. Thus, before the
submitted for the purpose of commencing and continuing the administrative claim is barred by prescription, the taxpayer must
running of the one hundred twenty (120)-day period.—With the be able to submit his complete documents in support of the
amendments only with respect to its place under Section 112, the application filed. This is because, it is upon the complete
Court finds that RMC No. 49-2003 should still be observed. Thus, submission of his documents in support of his application that it
taking the foregoing changes to the law altogether, it becomes can be said that the application was, “officially received” as
apparent that, for purposes of determining when the supporting provided under RMC No. 49-2003.
documents have been completed — it is the taxpayer who
ultimately determines when complete documents have been Same; Same; Same; From the date an administrative claim for
submitted for the purpose of commencing and continuing the excess unutilized value-added tax (VAT) is filed, a taxpayer has
running of the 120-day period. After all, he may have already thirty (30) days within which to submit the documentary
completed the necessary documents the moment he filed his requirements sufficient to support his claim, unless given further
administrative claim, in which case, the 120-day period is reckoned extension by the Commissioner of Internal Revenue (CIR).—To
from the date of filing. The taxpayer may have also filed the summarize, for the just disposition of the subject controversy, the
complete documents on the 30th day from filing of his application, rule is that from the date an administrative claim for excess
pursuant to RMC No. 49-2003. He may very well have filed his unutilized VAT is filed, a taxpayer has thirty (30) days within which
supporting documents on the first day he was notified by the BIR to submit the documentary requirements sufficient to support his
of the lack of the necessary documents. In such cases, the 120-day claim, unless given further extension by the CIR. Then, upon filing
period is computed from the date the taxpayer is able to submit by the taxpayer of his complete documents to support his
the complete documents in support of his application. application, or expiration of the period given, the CIR has 120 days
within which to decide the claim for tax credit or refund. Should the
Same; Same; Same; In a claim for tax credit or refund, it is the taxpayer, on the date of his filing, manifest that he no longer
taxpayer who has the burden to prove his cause of action. As such, wishes to submit any other addition documents to complete his
he enjoys relative freedom to submit such evidence to prove his administrative claim, the 120-day period allowed to the CIR begins
claim.—Except in those instances where the BIR would require to run from the date of filing.
additional documents in order to fully appreciate a claim for tax
credit or refund, in terms what additional document must be Same; Same; Same; In all cases, whatever documents a taxpayer
presented in support of a claim for tax credit or refund — it is the intends to file to support his claim must be completed within the
taxpayer who has that right and the burden of providing any and two (2)-year period under Section 112(A) of the National Internal
all documents that would support his claim for tax credit or refund. Revenue Code (NIRC).—In all cases, whatever documents a
After all, in a claim for tax credit or refund, it is the taxpayer who taxpayer intends to file to support his claim must be completed
within the two-year period under Section 112(A) of the NIRC. The
30-day period from denial of the claim or from the expiration of the fatal to its claim for tax credit or refund of excess unutilized excess
120-day period within which to appeal the denial or inaction of the value-added tax (VAT).—Indeed, a taxpayer’s failure with the
CIR to the CTA must also be respected. requirements listed under RMO No. 53-98 is not fatal to its claim
for tax credit or refund of excess unutilized excess VAT. This holds
Same; Same; Same; Under the current rule, the reckoning of the especially true when the application for tax credit or refund of
one hundred twenty (120)-day period has been withdrawn from excess unutilized excess VAT has arrived at the judicial level. After
the taxpayer by Revenue Memorandum Circular (RMC) No. 54- all, in the judicial level or when the case is elevated to the Court,
2014, since it requires him at the time he files his claim to the Rules of Court governs. Simply put, the question of whether
complete his supporting documents and attest that he will no the evidence submitted by a party is sufficient to warrant the
longer submit any other document to prove his claim.—Under the granting of its prayer lies within the sound discretion and judgment
current rule, the reckoning of the 120-day period has been of the Court.
withdrawn from the taxpayer by RMC No. 54-2014, since it
requires him at the time he files his claim to complete his Same; Same; Same; While it is still true a taxpayer must prove not
supporting documents and attest that he will no longer submit any only his entitlement to a refund but also his compliance with the
other document to prove his claim. Further, the taxpayer is barred procedural due process — it is also true that when the law or rule
from submitting additional documents after he has filed his mandates that a party or authority must comply with a specific
administrative claim. On this score, the Court finds that the obligation to perform an act for the benefit of another, the
foregoing issuance cannot be applied retroactively to the case at noncompliance thereof by the former should not operate to
bar since it imposes new obligations upon taxpayers in order to prejudice the latter, lest it render the nugatory the objective of the
perfect their administrative claim, that is, [1] compliance with the rule.—While it is still true a taxpayer must prove not only his
mandate to submit the “supporting documents” enumerated under entitlement to a refund but also his compliance with the procedural
RMC No. 54-2014 under its “Annex A”; and [2] the filing of “a due process — it is also true that when the law or rule mandates
statement under oath attesting to the completeness of the that a party or authority must comply with a specific obligation to
submitted documents,” referred to in RMC No. 54-2014 as “Annex perform an act for the benefit of another, the noncompliance
B.” This should not prejudice taxpayers who have every right to thereof by the former should not operate to prejudice the latter,
pursue their claims in the manner provided by existing regulations lest it render the nugatory the objective of the rule. Such is the
at the time it was filed. situation in case at bar.

Same; Same; Same; Revenue Memorandum Order (RMO) No. 53- Same; Same; Same; It is the taxpayer who determines when
98 is addressed to internal revenue officers and employees, for complete documents have been submitted for the purpose of the
purposes of equity and uniformity, to guide them as to what running of the one hundred twenty (120)-day period.—The alleged
documents they may require taxpayers to present upon audit of failure of Total Gas to submit the complete documents at the
their tax liabilities.—As can be gleaned from the above, RMO No. administrative level did not render its petition for review with the
53-98 is addressed to internal revenue officers and employees, for CTA dismissible for lack of jurisdiction. First, the 120-day period
purposes of equity and uniformity, to guide them as to what had commenced to run and the 120+30 day period was, in fact,
documents they may require taxpayers to present upon audit of complied with. As already discussed, it is the taxpayer who
their tax liabilities. Nothing stated in the issuance would show that determines when complete documents have been submitted for the
it was intended to be a benchmark in determining whether the purpose of the running of the 120-day period. It must again be
documents submitted by a taxpayer are actually complete to pointed out that this in no way precludes the CIR from requiring
support a claim for tax credit or refund of excess unutilized excess additional documents necessary to decide the claim, or even
VAT. denying the claim if the taxpayer fails to submit the additional
documents requested.
Same; Same; Same; A taxpayer’s failure with the requirements
listed under Revenue Memorandum Order (RMO) No. 53-98 is not
Same; Same; Same; A distinction must be made between Commissioner of Internal Revenue, 654 SCRA 702, G.R. No.
administrative cases appealed due to inaction and those dismissed 180390 July 27, 2011
at the administrative level due to the failure of the taxpayer to
submit supporting documents.—A distinction must be made Remedial Law; Civil Procedure; Judgments; Stare Decisis; The
between administrative cases appealed due to inaction and those doctrine of stare decisis dictates that when a court has reached a
dismissed at the administrative level due to the failure of the conclusion in one case, it should be applied to those that follow if
taxpayer to submit supporting documents. If an administrative the facts are substantially the same, even though the parties may
claim was dismissed by the CIR due to the taxpayer’s failure to be different.—Following the doctrine of stare decisis, which dictates
submit complete documents despite notice/request, then the that when a court has reached a conclusion in one case, it should
judicial claim before the CTA would be dismissible, not for lack of be applied to those that follow if the facts are substantially the
jurisdiction, but for the taxpayer’s failure to substantiate the claim same, even though the parties may be different, we find that
at the administrative level. When a judicial claim for refund or tax respondent is not liable for DST as the transfer of real properties
credit in the CTA is an appeal of an unsuccessful administrative from the absorbed corporations to respondent was pursuant to a
claim, the taxpayer has to convince the CTA that the CIR had no merger. And having complied with the provisions of Sections
reason to deny its claim. It, thus, becomes imperative for the 204(C) and 229 of the NIRC, we agree with the CTA that
taxpayer to show the CTA that not only is he entitled under respondent is entitled to a refund of the DST it erroneously paid on
substantive law to his claim for refund or tax credit, but also that various dates between October 31, 2001 to November 15, 2001 in
he satisfied all the documentary and evidentiary requirements for the total amount of P14,140,980.00.
an administrative claim. It is, thus, crucial for a taxpayer in a
judicial claim for refund or tax credit to show that its administrative Taxation; Tax laws must be construed strictly against the State and
claim should have been granted in the first place. Consequently, a liberally in favor of the taxpayer.—In closing, we must stress that
taxpayer cannot cure its failure to submit a document requested by taxes must not be imposed beyond what the law expressly and
the BIR at the administrative level by filing the said document clearly declares as tax laws must be construed strictly against the
before the CTA. Pilipinas Total Gas, Inc. vs. Commissioner of State and liberally in favor of the taxpayer. Commissioner of
Internal Revenue, 776 SCRA 395, G.R. No. 207112 Internal Revenue vs. La Tañeda Distillers, Inc. (LTDI [now
December 8, 2015 Ginebra San Miguel, 762 SCRA 636, G.R. No. 175188 July 15,
2015
Taxation; Banks and Banking; Certificate of Deposit; Definition of a
Certificate of Deposit.—A certificate of deposit is defined as “a Taxation; Excise Taxes; Under Section 129 of the National Internal
written acknowledgment by a bank or banker of the receipt of a Revenue Code (NIRC), as amended, excise taxes are imposed on
sum of money on deposit which the bank or banker promises to two (2) kinds of goods, namely: (a) goods manufactured or
pay to the depositor, to the order of the depositor, or to some produced in the Philippines for domestic sales or consumption or
other person or his order, whereby the relation of debtor and for any other disposition; and (b) things imported.—Under Section
creditor between the bank and the depositor is created.” 129 of the NIRC, as amended, excise taxes are imposed on two
kinds of goods, namely: (a) goods manufactured or produced in
Same; Same; Same; A document to be considered a certificate of the Philippines for domestic sales or consumption or for any other
deposit need not be in a specific form.—The fact that the SAP is disposition; and (b) things imported. Undoubtedly, the excise tax
evidenced by a passbook likewise cannot remove its coverage from imposed under Section 129 of the NIRC is a tax on property. With
Section 180 of the old NIRC, as amended. A document to be respect to imported things, Section 131 of the NIRC declares that
considered a certificate of deposit need not be in a specific form. excise taxes on imported things shall be paid by the owner or
Thus, a passbook issued by a bank qualifies as a certificate of importer to the Customs officers, conformably with the regulations
deposit drawing interest because it is considered a written of the Department of Finance and before the release of such
acknowledgement by a bank that it has accepted a deposit of a articles from the customs house, unless the imported things are
sum of money from a depositor. Prudential Bank vs. exempt from excise taxes and the person found to be in possession
of the same is other than those legally entitled to such tax DEL CASTILLO, J., Dissenting Opinion:
exemption. For this purpose, the statutory taxpayer is the importer
of the things subject to excise tax. Taxation; Tax Refunds; View that tax refunds, just like tax
exemptions must not rest on vague, uncertain or indefinite
Same; Same; Petroleum Products; Pursuant to Section 135(c) of inference but should be granted only by a clear and unequivocal
the National Internal Revenue Code (NIRC), petroleum products provision of law on the basis of language too plain to be mistaken,
sold to entities that are by law exempt from direct and indirect as taxes are the lifeblood of the government.—I cannot subscribe
taxes are exempt from excise tax.—Pursuant to Section 135(c), to petitioner’s postulation that the denial of its claim would result in
supra, petroleum products sold to entities that are by law exempt serious adverse consequences on the supply of fuel to tax-exempt
from direct and indirect taxes are exempt from excise tax. The entities under Section 135(c) of the NIRC as oil companies would
phrase which are by law exempt from direct and indirect taxes be unwilling to sell petroleum products to customers operating
describes the entities to whom the petroleum products must be within the special economic zone. This is not only unsubstantiated
sold in order to render the exemption operative. Section 135(c) but is also not a legal ground to grant petitioner’s claim for tax
should thus be construed as an exemption in favor of the refund or credit. It bears stressing that tax refunds, just like tax
petroleum products on which the excise tax was levied in the first exemptions must not rest on vague, uncertain or indefinite
place. The exemption cannot be granted to the buyers — that is, inference but should be granted only by a clear and unequivocal
the entities that are by law exempt from direct and indirect taxes provision of law on the basis of language too plain to be mistaken,
— because they are not under any legal duty to pay the excise tax. as taxes are the lifeblood of the government. Thus, unless there is
a clear grant of tax exemption or refund in the law, the Court
Same; Same; The statutory taxpayer may shift the economic cannot grant petitioner’s claim for tax refund or credit as this would
burden of the excise tax payment to another — usually the constitute judicial legislation, which is not allowed.
buyer.—It is noteworthy that excise taxes are considered as a kind
of indirect tax, the liability for the payment of which may fall on a Same; Same; View that Section 135 of the National Internal
person other than whoever actually bears the burden of the tax. Revenue Code (NIRC) is not a refund provision as it does not
Simply put, the statutory taxpayer may shift the economic burden provide for a tax refund in favor of the buyers, i.e., international
of the excise tax payment to another — usually the buyer. carriers and tax-exempt entities, and the sellers of petroleum
products.—Notably, Section 135 of the NIRC is not a refund
Same; Same; Petroleum Products; In cases involving excise tax provision as it does not provide for a tax refund in favor of the
exemptions on petroleum products under Section 135 of the buyers, i.e., international carriers and tax-exempt entities, and the
National Internal Revenue Code (NIRC), the Supreme Court (SC) sellers of petroleum products. Thus, there is no legal basis to grant
has consistently held that it is the statutory taxpayer, not the party petitioner’s claim for tax refund or credit. Besides, if the lawmakers
who only bears the economic burden, who is entitled to claim the intended to allow manufacturers, sellers, and importers to claim a
tax refund or tax credit.—In cases involving excise tax exemptions refund of excise taxes paid on petroleum products sold to
on petroleum products under Section 135 of the NIRC, the Court international carriers and tax-exempt entities under Section 135 of
has consistently held that it is the statutory taxpayer, not the party the NIRC, they would have expressly provided for it, just like in
who only bears the economic burden, who is entitled to claim the Section 130(D) of the same Code, which categorically allows the
tax refund or tax credit. But the Court has also made clear that this refund or credit of excise taxes paid on goods which are locally
rule does not apply where the law grants the party to whom the produced or manufactured and subsequently exported. Obviously,
economic burden of the tax is shifted by virtue of an exemption the absence of a tax refund provision in the NIRC in favor of these
from both direct and indirect taxes. In which case, such party must manufacturers, sellers, and importers of petroleum products only
be allowed to claim the tax refund or tax credit even if it is not proves that the lawmakers never intended to grant such kind of
considered as the statutory taxpayer under the law. Chevron refund. In addition, since the excise taxes on the petroleum
Philippines, Inc. vs. Commissioner of Internal Revenue, 768 products were paid pursuant to the NIRC, in this case, Section
SCRA 414, G.R. No. 210836 September 1, 2015 131(A) of the NIRC, these cannot be considered as illegally or
erroneously collected taxes. Thus, a claim for tax refund under international carriers and the tax-exempt entities under the said
Section 229 of the NIRC will also not prosper. provision, are exempt from paying excise tax on petroleum
products.
Same; Tax Exemption; View that neither can Section 135 of the
National Internal Revenue Code (NIRC) be construed as a tax Same; Same; Same; Same; View that Section 135 of the National
exemption in favor of manufacturers, sellers, and importers, which Internal Revenue Code (NIRC) should simply be construed as
would allow them to claim a refund or credit of the excise taxes prohibition on the shifting or passing on of the burden of excise tax
paid on the petroleum products sold to international carriers and to international carriers and tax-exempt entities, which purchase
tax-exempt entities.—Neither can Section 135 of the NIRC be petroleum products from manufacturers, sellers, and importers.—
construed as a tax exemption in favor of manufacturers, sellers, As I see it then, Section 135 of the NIRC should simply be
and importers, which would allow them to claim a refund or credit construed as prohibition on the shifting or passing on of the burden
of the excise taxes paid on the petroleum products sold to of excise tax to international carriers and tax-exempt entities,
international carriers and tax-exempt entities. In fact, a simple which purchase petroleum products from manufacturers, sellers,
reading of the provision clearly shows that it is a tax exemption in and importers. As aptly explained in the Decision dated April 25,
favor of the buyers, the international carriers and tax-exempt 2012 in Pilipinas Shell, Section 135 of the NIRC merely allows
entities under Section 135 of the NIRC. And as the Court in its April international carriers or, in this case, tax-exempt entities, to
25, 2012 Decision in Commissioner of Internal Revenue v. Pilipinas purchase petroleum products without the excise tax component as
Shell Petroleum Corporation, 671 SCRA 241, has previously said, an added cost in the price fixed by the manufacturers, sellers, or
“the tax exemption being enjoyed by the buyer cannot be the basis importers. In other words, while generally excise taxes paid by
of a claim for exemption by the manufacturer, seller, or importer.” manufacturers, sellers, and importers may be shifted or passed on
Thus, petitioner cannot use this provision to claim an exemption to their buyers, Section 135 of the NIRC provides for an exception
from the payment of excise tax. as it prohibits manufacturers, sellers, and importers from shifting
or passing on the excise taxes they paid on the petroleum products
Same; Same; Excise Taxes; Petroleum Products; View that sold to international carriers and tax-exempt entities under the
pursuant to Section 135 of the National Internal Revenue Code said provision.
(NIRC), manufacturers, sellers, and importers have no choice but
to shoulder the burden of the excise tax as their buyers, the Statutory Construction; View that interpretations placed upon a
international carriers and the tax-exempt entities under the said statute by the executive officers, whose duty is to enforce it, are
provision, are exempt from paying excise tax on petroleum not conclusive and will be ignored if judicially found to be
products.—While Section 135 of the NIRC is construed as a tax erroneous as the courts will not countenance administrative
exemption in favor of the buyers, we have consistently ruled that issuances that override, instead of remaining consistent and in
they are not entitled to a refund or credit of the excise taxes paid harmony with, the law they seek to apply and implement.—As to
on the petroleum products because they are not the statutory the RMO and BIR Rulings cited by petitioner, the Court is not
taxpayers. If so, how could the international carriers and the tax- bound by these administrative interpretations or rulings. As we
exempt entities under Section 135 of the NIRC, as buyers, benefit have consistently ruled, interpretations placed upon a statute by
from such exemption? The answer is simple. Section 135 of the the executive officers, whose duty is to enforce it, are not
NIRC exempts them from paying excise taxes passed on by conclusive and will be ignored if judicially found to be erroneous as
manufacturers, sellers, and importers to buyers of petroleum the courts will not countenance administrative issuances that
products. An excise tax, as we have often said, is an indirect tax override, instead of remaining consistent and in harmony with, the
wherein the tax liability falls on one person but the burden thereof law they seek to apply and implement.
can be shifted or passed on to another person, such as the
consumer. Thus, pursuant to Section 135 of the NIRC, Taxation; Excise Taxes; Tax Refunds; Tax Credit; Petroleum
manufacturers, sellers, and importers have no choice but to Products; View that manufacturers, sellers, and importers are not
shoulder the burden of the excise tax as their buyers, the entitled to claim a refund or credit of excise taxes paid on
petroleum products sold to international carriers and tax-exempt
entities under Section 135 of the National Internal Revenue Code
(NIRC).—All told, I find that the CTA in this case, did not err in
denying petitioner’s claim for tax refund or credit. To be clear,
Section 135 of the NIRC, upon which petitioner anchors its claim, is
not a tax refund provision nor is it a tax exemption in favor of
manufacturers, sellers, and importers of petroleum products.
Rather, it is a tax exemption for excise tax on petroleum products
in favor of the international carriers and the tax-exempt entities
under the said provision. It is a prohibition preventing
manufacturers, sellers, and importers from shifting or passing on
the excise taxes paid on the petroleum products they sold to their
buyers, the entities enumerated in the said provision. In view of
the foregoing, I submit that the doctrine laid down in the
Resolution dated February 19, 2014 in Pilipinas Shell should be
abandoned. It is my opinion that manufacturers, sellers, and
importers are not entitled to claim a refund or credit of excise
taxes paid on petroleum products sold to international carriers and
tax-exempt entities under Section 135 of the NIRC. Chevron
Philippines, Inc. vs. Commissioner of Internal Revenue, 768
SCRA 414, G.R. No. 210836 September 1, 2015

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