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Bioremedial potential of microbial mechanisms of metal


mobilization and immobilization
Geoffrey Michael Gadd
Microorganisms play important roles in the environmental fate possible [9••]. In fact, bioleaching using elemental sulfur as
of toxic metals and radionuclides with a multiplicity of substrate can be better than sulfuric acid treatment for metal
mechanisms effecting transformations between soluble and solubilization from contaminated aquatic sediments [10].
insoluble forms. These mechanisms are integral components of Iron- and sulfur-oxidizing bacteria, Thiobacillus ferrooxidans
natural biogeochemical cycles and are of potential for both in and Thiobacillus thiooxidans, respectively, were enriched
situ and ex situ bioremedial treatment processes for solid and from contaminated soil and were able to leach >50% of the
liquid wastes. metals present (As, Cd, Co, Cu, Ni, V, Zn, B, and Be). Strains
of T. ferrooxidans were able to remove all of the Cd, Co, Cu
Addresses and Ni [11]. T. ferrooxidans has also been used to treat air pol-
Department of Biological Sciences, University of Dundee, Dundee, lution control residues (APCR; fly ash and used lime).
DD1 4HN, UK; e-mail: g.m.gadd@dundee.ac.uk Although viability of the Thiobacilli was poor, removal of as
Current Opinion in Biotechnology 2000, 11:271–279 much as 95% of Cd (from APCR of ~270 mg Cd kg–1) was
achieved with ~69% Pb removal (from APCR of
0958-1669/00/$ — see front matter ~5 g Pb kg–1) and similar removals for Zn and Cu [12]. Note
© 2000 Elsevier Science Ltd. All rights reserved.
that the metals in such leachates can be subsequently
Abbreviations removed using bacterial sulfate reduction where the soluble
APCR air pollution control residues metals are precipitated as insoluble sulfides [9••].
CP Gly–Cys–Gly–Cys–Pro–Cys–Gly–Cys–Gly
DMSe dimethyl selenide
HP Gly–His–His–Pro–His–Gly The microbial production of organic acids, under the gen-
PCS phytochelatin synthase eral heading of ‘heterotrophic leaching’, is also of
SRB sulfate-reducing bacteria developing interest in pollution treatment and metal recov-
ery, and also in the context of mineral fertilization to
Introduction increase plant productivity [1••,13,14]. In the soil, het-
The mechanisms by which microorganisms effect changes erotrophic metal mobilization is of more importance than
in metal speciation and mobility are fundamental compo- autotrophic leaching and solubilization of, for example,
nents of biogeochemical cycles for metals, as well as all other phosphate- and sulfate-containing minerals, as this leads to
elements including carbon, nitrogen, sulfur and phosphorus, release of these important nutrients [1••]. Heterotrophic
with additional implications for plant productivity and leaching may be particularly appropriate for wastes of high
human health [1••]. Almost all metal–microbe interactions pH, such as filter dusts/oxides from metal processing as
have been examined in the context of environmental most Thiobacilli cannot solubilize effectively above pH 5.5.
biotechnology as a means for removal, recovery or detoxifi- Fungi need good aeration and a carbon source so their use
cation of inorganic and organic metal or radionuclide is generally envisaged to be in bioreactors. In most fungi,
pollutants [2,3,4••,5••]. Although much research is laborato- leaching is mediated by the production of organic acids,
ry based, there have been many developments to which provide a source of protons and metal-complexing
pilot/demonstration scale, with some processes apparently organic acid anions [1••,13,14]. Trichoderma harzianum can
in successful commercial operation. It should also be noted solubilize MnO2, Fe2O3, metallic zinc and rock (mostly Ca)
that metal removal/transformation processes are intrinsic phosphate with both chelation and reduction being
though less appreciated components of traditional means of involved in oxide solubilization [15]. Effective leaching of
water/sewage treatment as well as reed bed, lagoon and wet- a variety of wastes and low-grade minerals has been
lands technologies [4••,6]. Molecular and genetic analysis is demonstrated, for example, soils and muds, filter
now furthering our understanding of microbial metal metab- dust/oxides, lateritic ores, copper converter slag, fly ash and
olism, including those aspects that have potential in electronic waste materials [1••,16•]. For the latter, a two-
biotechnology [7••,8••]. This review details recent advances stage process was proposed where initial growth of
in understanding of the most important mechanisms of solubilizing organisms is followed by separate contact of
microbial metal transformations within the contexts of electronic scrap with metabolite-containing medium,
bioremediation and environmental biogeochemistry. which would overcome any inhibition of organism growth
by high scrap concentrations [16•]. Another method for
Metal mobilization treatment of metal-contaminated sandy soil relies on
Leaching siderophore-mediated metal solubilization by Alcaligenes
Leaching of mineral ores by acidophilic sulfur-oxidizing bac- eutrophus. Solubilized metals are adsorbed to the biomass
teria is an established bioindustry and although most interest and/or precipitated, with biomass separated from a soil slur-
arises from a hydrometallurgical perspective, leaching of ry by a flocculation process. This process resulted in a large
contaminating metals from soils and other matrices is also decrease in the bioavailability of Cd, Zn and Pb [17••].
272 Environmental biotechnology

Heterotrophic solubilization can also have consequences for Microbial reduction of Fe(III) and Mn(IV) could be one
other remedial treatments for contaminated soils. way for releasing such metals and this process can be
Pyromorphite, Pb5(PO4)3Cl, is a stable lead mineral and can enhanced with the addition of humic materials, or related
form in urban and industrially contaminated soils. Such insol- compounds. Such compounds may act as electron shuttles
ubility reduces lead bioavailability and the formation of for, for example, U(VI) and Cr(VI), converting them to
pyromorphite has been suggested as a remediation technique less soluble forms, especially if located in tight pore
for lead-contaminated land, if necessary by means of phos- spaces where microorganisms cannot enter [3]. Bacterial
phate addition. Pyromorphite can be solubilized, however, by Fe(III) reduction resulted in release of, for example, Mn
phosphate-solubilizing fungi (e.g. Aspergillus niger) and plants and Co, from goethite, where 5% of the iron was substi-
grown with pyromorphite as a sole phosphorus source accu- tuted by these metals [27]. Mercuric reductase, from a
mulate both P and Pb [18••]. Further, during the fungal recombinant Escherichia coli strain, has been immobilized
transformation of pyromorphite, the biogenic production of on a chemically modifed diatomaceous earth support, with
lead oxalate dihydrate was observed for the first time [18••]. immobilization enhancing stability and reusability: maxi-
This study emphasises the importance of considering micro- mal activity was 1.2 nmol Hg mg–1 protein s–1 at an initial
bial processes when developing remediation techniques for Hg2+ concentration of 50 µmol dm–3 [28••].
metal-contaminated soils. Mechanisms of lead solubilization
or immobilization such as lead oxalate may have significant Metal immobilization
consequences for metal mobility and transfer between envi- Biosorption
ronmental compartments and organisms. Biosorption encompasses those physico-chemical mecha-
nisms by which metal species, radionuclides and so on, are
Related to heterotrophic solubilization is fungal transloca- removed from aqueous solution by microbial biomass or
tion of, for example, Cs, Zn and Cd, which can lead to products. The approach can be multidisciplinary as the
concentration of metals and radionuclides in specific basic nature of experimentation is attractive to biologists,
regions of the mycelium and/or in fruiting bodies. Whether chemists and engineers, although inadequate dialogue
the concentration factors observed in vitro can be repro- between such groups has lead to considerable superficiali-
duced in the field and whether such amounts can ty and duplication in the literature. It has also lead to the
contribute to soil bioremediation remains a topic for further submersion of many other metal accumulation or transfor-
investigation [19]. Some parallels may be drawn with the mation processes, including those dependent on
phytoremediatory approach to soil contamination. Other metabolism, under this general subject heading.
possibilities relate to the use of copper-tolerant wood decay Biosorption technology has been extended to almost every
fungi to degrade copper-treated wood products, although other kind of biological material and even to describe
results obtained so far have shown only slight effects on the removal of certain organic substances. Many studies have
copper content of wood before or after decay [20]. demonstrated the efficiency of metal removal by microbial
biomass in a range of reactor formats and under a range of
Alkylation and reduction physical and chemical conditions [29–35]. Recent develop-
Volatile dimethyl selenide (DMSe) can form naturally ments in reactor formats and/or biomass separation include
from inorganic Se species in soils and this can regulate geo- hollow-fibre crossflow microfiltration using Pseudomonas
chemical cycling of Se and therefore influence Se aeruginosa for biosorption of Pb, Cu and Cd in single and
bioremediation. Many environmental and soil factors ternary metal systems. Removal efficiencies in both single
(e.g. organic amendments and frequent tillage) can be and ternary biosorption were Pb>Cu>Cd and at an influent
optimized to increase diffusive transport through soil and metal concentration of 200 µM and flow rate of 350 ml h–1,
enhance volatilization [21–23]. In moist or flooded soil, effluent concentrations of Cu and Pb satisfied discharge
however, less DMSe is lost to the atmosphere, with a sig- regulations. This study developed a rapid-equilibrium
nificant proportion of DMSe being converted to model and a mass-transfer model that accurately described
non-volatile forms of Se. Oxidized dimethylated Se single- and multi-metal biosorption, respectively [36•].
(ODMSe), including dimethyl selenoxide (DMSeO) Dispersed air flotation was used to separate Cd-laden
and/or dimethyl selenone (DMSeO2), was the dominant actinomycete biomass. At a Cd concentration of 5 mg L–1
form of non-volatile Se, and accounted for up to 90% of Se and 0.5 g L–1 freeze-dried biomass, Cd removal was virtu-
in flooded soils. Such transformation of DMSe can be ally 100% over a wide range of pH values [37]. Arthrobacter
responsible for the low Se volatilization rate in flooded sp. was entrapped within a macroporous and microporous
soils and sediments [24••]. Microorganisms enhance matrix of (poly)hydroxyethyl methacrylate cross-linked
arsenic mobilization from soil by up to 24%, compared to with trimethylolpropanetrime-thacrylate. The rate of
formaldehyde-treated controls, with only low formation of biosorption was controlled by the rate of diffusion through
dissolved methylated arsenic species [25]. Other bacteria the shell of saturated material and a maximum Cu uptake
are capable of the oxidation of As(III) to As(V) [26]. of ~7 mg g–1 dry wt was observed for a resin–biomass com-
plex containing 8% w/w biomass [38,39]. In P. aeruginosa,
Fe(III) and Mn(IV) oxides absorb metals strongly and this lanthanide biosorption obeyed the Brunauer-Emmett-
may hinder metal extraction from contaminated soils. Teller isotherm for multilayer adsorption with uptake of
Bioremedial potential of microbial mechanisms of metal mobilization and immobilization Gadd 273

La3+, Eu3+ and Yb3+ unaffected by K+, Ca2+, Cl–, SO42–, or adoption of biosorption as a commercially viable treat-
NO3– but strongly inhibited by Al3+ [40]. ment method to date. The lack of commercial
development is somewhat perplexing, although the lack
As well as bacteria, fungi and algae also receive sustained of specificity and lower robustness of biomass-based sys-
biosorptive examination. Zn biosorption to Rhizopus tems compared to ion exchange resins is often cited as a
arrhizus was predominantly to wall chitin and chitosan reason [5••]. Unless such reasons and the reluctance of
(maximum sorptive capacity of 312 µmol g–1 dry wt com- industry to adopt and develop biosorption technology are
pared to 213 µmol g–1 dry wt for the wall) [31]. Sorption overcome, the rationale for continued research activity is
activity for UO22+, Pb2+, Mn2+, and Co2+ of A. niger struc- weak as few studies provide novel insights or under-
tural cell-wall polysaccharides also depends on the standing of the fundamental physical and chemical
chitin : glucan ratio [41]. Freeze-dried biomass of white-rot mechanisms involved. This perhaps contrasts with a bio-
fungi was found to be the most efficient biomass type for geochemical perspective where microbial metal sorption
Cd2+ biosorption [42], whereas dry biomass of Phanerochaete is contributing to an understanding of metal fate and
chrysosporium sorbed mercury and alkylmercury species cycling in the environment. For example, the application
with an affinity of CH3HgCl>C2H5HgCl>Hg(II) and max- of surface complexation modeling or a linear program-
imum capacities of 79, 67 and 61 mg g dry wt–1, ming approach to specific chemical and electrostatic
respectively [43]. Saccharomyces cerevisiae accumulated toxic interactions occurring at the solution–cell-wall interface
metals when immobilized in a sol–gel matrix with the can also be applied to biosorption phenomena. Such stud-
entrapment matrix contributing to overall uptake. Affinities ies can relate variations in surface properties with
of the biogel for metal accumulation were variations in metal affinity in order to predict metal
Hg>Zn>Pb>Cd>Co, Ni>Cu [35]. Immobilized biomass of mobilities in complex natural systems [53,54,55••,56].
Rhizopus oligosporus was more effective than freely sus-
pended biomass for Cd2+ with a possible contribution to Metal-binding molecules
sorption by the immobilization matrix [34]. A reliable Eukaryotic metallothioneins and other metal-binding pep-
model based on Fick’s Law of Diffusion and the Langmuir tides have been expressed in E. coli as fusions to
adsorption model was able to predict experimentally deter- membrane or membrane-associated proteins such as
mined kinetics of Ni2+ removal by fungal biosorbents [44]. LamB, an outer membrane protein that functions as a
Removal of Pb, Cd and Cu by alkali-treated A. niger bio- coliphage surface receptor and is involved in maltose/mal-
mass was greater than removal achieved by granular todextrin transport. Such in vivo expression of
activated carbon (F-400) [45]. Benzaldehyde was an effec- metallothioneins provides a means of designing biomass
tive fixation agent for Saccharomyces cerevisiae biomass, with specific metal-binding properties [8••,57,58]. Metal-
which retained its original lead biosorption capacity [46]. binding peptides of sequences Gly–His–His–Pro–His–Gly
For algae, in situ metal removal from the marine environ- (HP) and Gly–Cys–Gly–Cys–Pro–Cys–Gly–Cys–Gly (CP)
ment has been postulated, with one Chlorella strain were engineered into LamB protein and expressed in
exhibiting maximal removal of 39.4 mg Cd g–1 dry cells E. coli. Cd2+ : HP and Cd2+ : CP stoichiometries were 1:1
from 50 µM Cd under marine conditions [47]. Cu was pref- and 3:1, respectively, indicating the potency of these pep-
erentially adsorbed to Zn by Cymodocea nodosa, a brown tides for metal binding. Surface display of CP increased
alga [48]. Little attention has been given to metal–organic the Cd2+ binding ability of E. coli fourfold. Some competi-
mixtures, though equilibrium uptakes of, for example, Ni tion of Cu2+ with Cd2+ for HP resulted from strong Cu2+
and phenol are changed due to initial pH and other reaction binding to HP, indicating that the relative metal-binding
components [49]. Bacterial, algal and fungal biomass were affinities of inserted peptides and the wall to metal ion
able to remove and concentrate gold from solutions in ratio were important in the design of peptide sequences
which it occurred as a gold–cyanide complex [50]. Note that and their metal specificities [59••]. Another gene encoding
extracellular polymers are intimately involved in Cd a de novo peptide sequence containing the metal-binding
adsorption by activated sludges [51]. motif Cys–Gly–Cys–Cys–Gly was chemically synthesized
and expressed in E. coli as a fusion with the maltose-bind-
Chemical modification of biomass may create derivatives ing protein. Such cells possessed enhanced binding of
with altered metal-binding abilities and affinities. A. niger Cd2+ and Hg2+ compared to cells lacking the peptide [57].
mycelium was modified by introducing additional carboxy
or ethyldiamino groups, with the latter substitution Related to the application of metal-binding molecules is
increasing the maximal capacity for nickel from ~70 to the identification of genes encoding phytochelatin syn-
~1060 mmol kg–1. An increase in maximal binding capaci- thases (PCSs) as phytochelatins play major roles in metal
ties for Cd, Ni and Zn also resulted in carboxy-modified detoxification in plants and fungi. Heterologous expres-
biomass (Cd 100–274; Ni 71–182; Zn 185–303 mmol kg–1, sion of PCS genes dramatically enhanced metal tolerance,
respectively) [52•]. providing molecular evidence for the role of phytochelatin
molecules in metal tolerance. Future research with
The earlier commercial promise and development of microorganisms and plants may allow testing of the poten-
biosorption appears to have largely ceased and there is no tial of PCS genes for bioremediation [60•]. A variety
274 Environmental biotechnology

of other metal-binding molecules may have future poten- Tc-contaminated wastewater [65••]. In fact, compared to
tial for metal recovery. Culture filtrates from the an E. coli mutant that overexpressed the reductase, the
sulfate-reducing bacterium Desulfococcus multivorans D. desulfuricans enzyme exhibited a higher specific activ-
exhibited copper-binding with 12 day old filtrates having ity, reduced anion sensitivity, a better temperature
a copper-binding capacity of 3.64 ± 0.33 µmol ml–1 with a optimum, and a lower Ks for formate, the electron
stability constant log10K of 5.68 ± 0.64 (n = 4) [61•]. A hol- donor [66•]. D. desulfuricans can also reduce Pd(II) to cell-
low-fibre reactor containing an engineered E. coli strain bound Pd(0) with the hydrogen-dependent reduction
expressing Hg2+ transport and metallothionein accumu- being O2-insensitive, thus providing a means of Pd
lated Hg2+ effectively, reducing a concentration of recovery under oxic conditions [67]. Mention should be
2 mg L–1 to ~5 µg L–1 [62]. It can be noted that biosen- made of those sulfate-reducing bacteria such as
sors for the detection of metal bioavailability have been Desulfotomaculum reducens that share physiological proper-
developed based on the direct interaction between ties with both sulfate- and metal-reducing groups of
metal-binding proteins and metal ions. Here, capacitance bacteria and can grow with Cr(VI), Mn(IV), Fe(III) and
changes of the proteins (e.g. a synechococcal metalloth- U(IV) as sole electron acceptors [68].
ionein and a mercury resistance regulatory protein) were
detected in the presence of femtomolar to millimolar Se(VI) reduction to elemental insoluble Se(0) has been
metal ion concentrations [63•]. employed in the remediation of contaminated waters and
soils. Some bacteria can use such a reduction to support
Reductive precipitation growth, making this a natural process for in situ applica-
Where reduction of a metal to a lower redox state occurs, tions. Though reduction of oxyanions of As and Se can
mobility and toxicity can be reduced, thus offering occur by different mechanisms, the most environmental-
potential bioremediation applications. Such processes ly significant process is dissimilatory reduction.
can also accompany other indirect reductive metal pre- Oxyanions of As and Se can be used in microbial anaero-
cipitation mechanisms, for example, in sulfate-reducing bic respiration as terminal electron acceptors providing
bacterial systems where reduction of Cr(VI) can be a enough energy for growth and metabolism. Their reduc-
result of indirect reduction by Fe2+ and the produced sul- tion can be coupled to a variety of organic substrates (e.g.
fide. Aerobic or anaerobic reduction of Cr(VI) to Cr(III) lactate, acetate and aromatics) and the bacteria are found
is widespread in microorganisms and both ex situ reactor in a range of habitats and are not confined to any specific
systems and in situ treatment approaches have been doc- genus. These organisms, and perhaps even the enzymes
umented. Problems can occur with Cr(VI) toxicity as well themselves, may have applications for bioremediation of
as maintenance of anaerobic conditions for anaerobic Se- and As-contaminated environments [69••].
Cr(VI) reducers. However, several aerobic and anaerobic Sulfurospirillum barnesii can simultaneously reduce both
Cr(VI) reducers are known with some being able to use NO3– and Se(VI). Kinetic experiments with cell mem-
organic contaminants as electron donors for Cr(VI) reduc- branes of S. barnesii suggest the presence of constitutive
tion, pointing to the potential for in situ treatment of selenate and nitrate reduction as well as an inducible,
mixed wastes [3]. U(VI) can be reduced to U(IV) by cer- high affinity nitrate reductase, which also has a low affin-
tain Fe(III)-dissimilatory microorganisms, for example, ity for selenate, in nitrate-grown cells. Simultaneous
Geobacter metallireducens, and this reduction in solubility reduction of micromolar Se(VI) in the presence of mil-
can be the basis of U removal from contaminated waters limolar nitrate suggests a role for these organisms in
and leachates [3]. Sulfur and sulfate-reducing bacteria bioremediating nitrate-rich seleniferous waste-
are geochemically important in reductive precipitation of waters [70••]. It has been shown that selenate does not
toxic metals, for example, U(VI) and Cr(VI), a process sorb to soil components during transport in saturated soil
mediated by multiheme cytochrome c proteins. The columns, but rapidly reduces to forms that are strongly
gene encoding cytochrome c7 from Desulfuromonas ace- retarded. Such findings suggest that Se will be retained
tooxidans has been cloned and expressed in Desulfovibrio near the soil surface even under extreme leaching condi-
desulfuricans, the recombinant organism exhibiting tions [71]. It should be noted that the reoxidation of Se(0)
enhanced expression of metal reductase activities. Such is now known to be under microbial control and where
overproduction of active cytochrome c7 could be impor- alteration in physico-chemical conditions leads to, for
tant in fixed-enzyme reactors or in the production of example, drying out of Se(0)-contaminated sediments or
organisms with enhanced metal reductase activities for aerobiosis of subsurface soils, Se(0) can be reoxidized to
bioremediation [64]. D. desulfuricans can couple the oxi- form toxic selenite and selenate [72]. The incidental abil-
dation of a range of electron donors to reduction of ity of a variety of microorganisms from all major groups to
Tc(VII), mediated by a periplasmic dehydrogenase, reduce Se(VI) and Te(VI) by additional often uncharac-
which is precipitated as an insoluble oxide at cell periph- terized mechanisms offers additional scope for
eries. Resting cells, immobilized in a flowthrough bioreactor-based approaches [73•]. Finally, rhizosphere
membrane bioreactor, accumulated substantial quantities bacteria increased the efficiency of Se and Hg phytore-
of Tc when supplied with formate as the electron donor, mediation by promoting the accumulation of Se and Hg
suggesting the potential of this organism in treatment of in tissues of wetland plants [74•].
Bioremedial potential of microbial mechanisms of metal mobilization and immobilization Gadd 275

Sulfide precipitation phenomena were enhanced in biofilm-immobilized cells


Sulfate-reducing bacteria (SRB) are anaerobic het- in an air-lift bioreactor; the uranyl phosphate accumulated
erotrophs utilizing a range of organic substrates and SO42– by the bacterial biomass has potential as a bio-inorganic
as a terminal electron acceptor. The sulfide produced ion exchanger [80]. The Citrobacter acid phosphatase has
from sulfate reduction plays a major role in metal sulfide been characterized and found to exist in two isoforms (CPI
immobilization in sediments but has also been applied to and CPII) with differing stabilities, which would relate to
bioremediation of metals in waters and leachates. In one their suitability for metal phosphate precipitation [81••]. A
integrated microbial process for the bioremediation of soil strain of Acinetobacter was isolated from a wastewater-treat-
contaminated with toxic metals, sulfur-oxidizing bacteria ment plant operating a biological phosphate removal
were used to leach metals from contaminated soils by process. Polyphosphate was degraded under anaerobic
breakdown of minerals and liberation of acid-labile conditions in the presence of Cd or UO22+, the latter stim-
sorbed or chemical forms [9••]. A large proportion of the ulating the reaction that produced free Pi. Cd was
acidity and almost the entirety of released metals were associated with phosphate-containing intracellular gran-
removed using bacterial sulfate reduction in an internal ules [82]. In E. coli, manipulation of polyphosphate
sedimentation reactor. The combination of soil bioleach- metabolism by overexpression of the genes for polyphos-
ing followed by separate bioprecipitation of leached phate kinase (ppk) and polyphosphatase (ppx) can result in
metals by SRB proved to be effective in removing and lower intracellular polyphosphate, phosphate secretion
concentrating a range of metals, including Zn, Cu and Cd, and increased metal tolerance [83].
from metal-contaminated soil. The resultant solids, once
separated, represented a ~200-fold reduction in volume Conclusions
compared to the soil, whereas the low toxic metal content Mechanisms of microbial solubilization and immobiliza-
of the clarified liquor produced would permit discharge or tion of metal(loid)s, radionuclides and related substances
allow recycling of the liquor to the bioleaching stage and are of clear potential for bioremediation, with some
permit water conservation during process operation. processes being integral to the operation of several suc-
Where soil and water conditions are appropriate, the soil- cessful in situ and ex situ processes. Although biosorption
leaching component of such an integrated process could research is rather introverted with little recent develop-
possibly be carried out in situ, although conditions allow- ment in an industrial context, work on metal leaching
ing this would be prone to uncertainty. In other cases, a from contaminated matrices, metal(loid) transformation
range of ex situ options, including heap leaching or slurry and bioprecipitation is leading to ‘field’ development, as
bioreactors, could be used to solubilize metals and feed well as providing fundamental scientific insights into
the bioprecipitation reactor [9••]. Sulfate-reducing bacte- metal–microbe interactions. As well as the biotechnologi-
rial biofilm reactors may offer a means of process cal significance, it should be emphasized that this work
intensification and entrap or precipitate metals, for exam- also provides understanding of the biogeochemistry of
ple, Cu and Cd, at the biofilm surface [75••,76]. Mixed metal(loid) cycling in the environment and the central
SRB cultures were more effective than pure cultures for role of microorganisms in affecting metal mobility and
metal removal, which was enhanced by greater produc- transfer between different biotic and abiotic locations.
tion of exopolymers in the mixed culture [75••,76].
Anaerobic solid substrate bioreactors have also been used Update
in laboratory treatment of acid mine drainage with sul- Developments of relevance to this topic, published since
fate-reducing activity being an important component of submission of the manuscript, have occurred in several
the overall removal process, which exceeded 99% for Cu areas including biosorption, alkylation and reduction.
and Cd [77]. Note also that a complex array of microbial,
plant and soil interactions, including sulfate reduction, In an attempt to create a metal-capturing system for use in
contribute to metal immobilization and/or removal from bioremediation, a peptide library was screened for binding
contaminated wetlands [6,78]. to ZnO. By engineering a structural component of the fim-
brae of E. coli to display a random peptide library,
Phosphate precipitation metal-chelating bacteria were isolated. Sequences respon-
Microbially enhanced chemisorption where biologically sible for Zn adherence were identified and characterized
produced phosphate (Pi) precipitates metals as phosphates and found to have varying affinities and specificity for
is effective for a range of metals as well as radionuclides: a ZnO. Bacterial surface display of such ‘designer’ chelators
mixture of accumulative and chemisorptive mechanisms in connection with type 1 fimbrae may offer a system for
contribute to the overall process. Zirconium was mineral- engineering bacteria with particular biosorptive
ized by a Citrobacter sp. to a mixture of Zr(HPO4)2 and properties [84]. Other studies have generated recombinant
hydrated zirconia (ZrO2); biomineralization of uranium as strains of Staphylococcus xylosus and Staphylococcus carnosus
HUO2PO4 was repressed by zirconium in the presence of with surface-exposed chimeric proteins containing poly-
excess Pi. Cell-bound HUO2PO4 facilitated Ni2+ removal histidyl peptides for metal ion binding, the first
by intercalative ion exchange into the polycrystalline lat- demonstration using Gram-positive bacteria. Such cells
tice and also promoted Zr removal [79]. Similar exhibited enhanced Ni2+ and Cd2+ binding capacity and
276 Environmental biotechnology

may have potential in bioremediation or biosensor applica- was unable to use arsenate as a terminal electron accep-
tions [85]. Although the significance of extracellular tor but possessed an arsenate reductase [93].
polymeric substances in metal biosorption is well known, it
has recently been demonstrated that the composition of
Acknowledgements
cell-associated polymers and their ability to sorb toxic met- The author gratefully acknowledges financial support for his own work
als are functions of culture media and conditions, which described from the Biotechnology and Biological Sciences Research Council
(SPC 02812, SPC05211, BSW 05375) and the Royal Society.
offers manipulative possibilities for biosorption-type appli-
cations [86]. Citrate-utilizing strains of Pseudomonas
References and recommended reading
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organisms may have potential in the treatment of metal- ••of outstanding interest
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•• in metal speciation, physiology and biogeochemical processes.
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Key attributes and advantages of microbial systems for metal/radionuclide
Aqueous phase flux can have an impact on the metabo- bioremediation are compared with proven physico-chemical technologies.
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that removal of biogenic Fe(II) via aqueous phase trans- •• Biotechnol 1999, 51:730-750.
port dramatically increased Fe(III) reduction and This review details current understanding of known metal resistance sys-
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associated bacterial growth. As such organisms can sis and transport for important toxic metal elements.
reductively liberate or immobilize metal contaminants,
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as mentioned previously, these findings have implica- •• improved microbes and enzymes for bioremediation. Curr Opin
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reduce Fe(III), Mn(IV) and other metals at 100°C. metal-contaminated soil. Initial leaching of contaminated soil by sulfur-oxidiz-
Reduction was hydrogen-dependent with U(VI) reduced ing bacteria was followed by separate precipitation of leachate metals as
insoluble sulfides by a mixed culture of sulfate-reducing bacteria.
to U(IV) uraninite, Tc(VII) to Tc(IV) or Tc(V), Cr(VI) to
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tion of manganese carbonate. The metal reduction indigenous sulfur-oxidizing bacteria: a feasibility study. Water Sci
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potential for bioremediation of metal-laden water [91]. It 11. Gomez C, Bosecker K: Leaching heavy metals from contaminated
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have been shown to reduce arsenate. A Desulfomicrobium isolate of Penicillium rugulosum and two UV-induced mutants.
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minimal medium in the absence of SO42–, the mecha- 14. Reyes I, Bernier L, Simard RR, Tanguay P, Antoun H: Characteristics
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Bioremedial potential of microbial mechanisms of metal mobilization and immobilization Gadd 277

15. Altomare C, Norvell WA, Björkman T, Harman GE: Solubilization of 34. Aloysius R, Karim MIA, Ariff AB: The mechanisms of cadmium
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This paper describes a microbial process for soil bioremediation based on aeruginosa was used to biosorb Pb, Cu and Cd. The results lead to the
siderophore-mediated metal solubilization and subsequent metal adsorption development of a rapid-equilibrium and a mass-transfer model for single- and
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pyromorphite. Such transformation also resulted in the production of Poly(hydroxiethyl methacrylate) resins as supports for copper (II)
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organoselenium compounds and provides an explanation for low Se
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Batch zinc biosorption by a bacterial non-living Streptomyces thermodynamics of metal adsorption onto two common bacteria.
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278 Environmental biotechnology

55. Small TD, Warren LA, Roden EE, Ferris FG: Sorption of strontium by 70. Oremland RS, Switzer Blum J, Burns Bindi A, Dowdle PR, Herbel M,
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processes in determining metal mobilities in the environment where hetero- selenium-respiring bacterium Sulfurospirillum barnesii and suggests a pos-
geneous bacteria–oxide composite solids are commonly found. sible role in bioremediation of nitrate-rich seleniferous wastewaters.
56. Cox JS, Smith DS, Warren LA, Ferris FG: Characterizing heteroge- 71. Guo L, Frankenberger WT, Jury WA: Evaluation of simultaneous
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72. Dowdle PR, Oremland RS: Microbial oxidation of elemental seleni-
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58. Valls M, González-Duarte R, Atrian S, De Lorenzo V: This paper examines accumulation and transformation of tellurite (TeO32–) by
Bioaccumulation of heavy metals with protein fusions of metal- filamentous fungi. Reduction and precipitation of elemental Te within vac-
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being volatilized in a species-dependent process.
59. Kotrba P, Doleková L, de Lorenzo V, Ruml T: Enhanced
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surface display of short metal binding peptides. Appl Environ • enhance the accumulation of selenium and mercury in wetland
Microbiol 1999, 65:1092-1098. plants. Planta 1999, 209:259-263.
This paper describes the engineering and expression of metal binding pep- This work demonstrates that rhizosphere bacteria can increase the efficien-
tides in E. coli and the resultant increase in Cd2+ binding ability. cy of Se and Hg phytoremediation by promoting the accumulation of Se and
Hg in the tissues of wetland plants.
60. Clemens S, Kim EJ, Neumann D, Schroeder JI: Tolerance to toxic
• metals by a gene family of phytochelatin synthases from plants 75. White C, Gadd GM: Accumulation and effects of cadmium on
and yeast. EMBO J 1999, 18:3325-3333. •• sulphate-reducing bacterial biofilms. Microbiology 1998,
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viding molecular evidence for the role of phytochelatins in metal tolerance. This work demonstrates that mixed sulfate-reducing bacterial biofilms are
more effective than pure cultures for metal removal, the mechanisms of accu-
61. Bridge TAM, White C, Gadd GM: Extracellular metal-binding mulation being entrapment and/or precipitation of CdS at the biofilm surface.
• activity of the sulphate-reducing bacterium Desulfococcus
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extracullular metal-binding capacity that is unrelated to the production of sulfide.
77. Drury WJ: Treatment of acid mine drainage with anaerobic solid-
62. Chen SL, Kim EK, Shuler ML, Wilson DB: Hg2+ removal by substrate reactors. Water Environ Res 1999, 71:1244-1250.
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proteins (e.g. synechococcal metallothionein and a mercury regulatory pro- immobilized and chemically-coupled cells of a Citrobacter sp.
tein) were used as biosensors to examine metal bioavailability in environ- pre-grown in continuous culture. Biotechnol Bioeng 1999,
mental samples. 63:87-97.
64. Aubert C, Lojou E, Bianco P, Rousset M, Durand M-C, Bruschi M, 81. Jeong BC, Macaskie LE: Production of two phosphatases by a
Dolla A: The Desulfuromonas acetoxidans triheme cytochrome c7 •• Citrobacter sp. grown in batch and continuous culture. Enzyme
produced in Desulfovibrio desulfuricans retains its metal reduc- Microbial Technol 1999, 24:218-224.
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65. Lloyd JR, Ridley J, Khizniak T, Lyalikova NN, Macaskie LE: Reduction to exist in two isoforms of differing stability and suitability for metal phos-
•• of technetium by Desulfovibrio desulfuricans: biocatalyst phate precipitation.
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Environ Microbiol 1999, 65:2691-2696. other environmental conditions on the anaerobic phosphate
This paper describes the efficient reduction and precipitation of Tc(VII) by metabolism of Acinetobacter johnsonii. Microbiology 1999,
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83. Keasling JD, Van Dien SJ, Pramanik J: Engineering polyphosphate
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• reduction of technetium by Escherichia coli and Desulfovibrio inorganic contaminants. Biotechnol Bioeng 1998, 58:231-239.
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effect of process parameters. Biotechnol Bioeng 1999, 66:122-130. 84. Kjærgaard K, Sørensen JK, Schembri MA, Klemm P: Sequestration
This work compares the Tc(VII) reductive performance of Desulfovibrio of zinc oxide by fimbrial designer chelators. Appl Environ
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85. Samuelson P, Wernérus H, Svedberg M, Ståhl S: Staphylococcal
67. Lloyd JR, Macaskie LE: Enzymatic recovery of elemental palladium surface display of metal-binding polyhistidyl peptides. Appl
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86. Bonthrone KM, Quarmby J, Hewitt CJ, Allan VJM, Paterson-Beedle M,
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Microbiol Lett 1998, 162:193-198. polymeric material of a metal-accumulating Citrobacter sp.
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69. Stolz JF, Oremland RS: Bacterial respiration of arsenic and
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This review highlights some of the recent advances and provides new Growth of naturally occurring microbial isolates in metal-citrate
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88. Hard BC, Walther C, Babel W: Sorption of aluminum by sulfate- 91. Kashefi K, Lovley DR: Reduction of Fe(III), Mn(IV) and toxic metals
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92. Francis CA, Obraztsova AY, Tebo BM: Dissimilatory metal reduction
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