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South African Journal of Botany 100 (2015) 132–140 

Phytotoxic interference of volatile organic compounds and water extracts of Tinospora 


tuberculata Beumee on growth of weeds in rice fields 
F. Aslani a,⁎, A.S. Juraimi a, M.S. Ahmad-Hamdani a, M.A. Alam a, F.S.Golestan Hashemi c, D. Omar 
b, M.A. Hakim c 
a Department of Crop Science, Faculty of Agriculture, Universiti Putra Malaysia (UPM), 43400 Serdang, Selangor, Malaysia b 
Department of Plant Protection, Faculty of Agriculture, Universiti Putra Malaysia (UPM), 43400 Serdang, Selangor, Malaysia c 
Institute of Tropical Agriculture, Universiti Putra Malaysia (UPM), 43400 Serdang, Selangor, Malaysia 
a r t i c l e i n f o a b s t r a c t Article history: Received 4 September 2014 Received in revised form 26 February 2015 Accepted 
23 April 2015 Available online 14 June 2015 
Edited by L Sebastiani 
Keywords: Allelopathy Aqueous water extract GC–MS HS-SPME-GC–MS Natural herbicide Volatile organic compounds 
⁎  Corresponding  author  at:  Department  of  Crop  Science,  Faculty  of  Agriculture,  Universiti  Putra  Malaysia  (UPM),  43400 
Serdang, Selangor, Malaysia. Tel.: +60 129134508. 
E-mail address: aslani.farzad.1362@gmail.com (F. Aslani). 
Tinospora  tuberculata  Beumee  is  an  aromatic  shrub with pharmacological properties and belongs to the Menispermaceae family. 
We  assessed  T.  tuberculata  for  its  ability  to  suppress  growth  of  weeds  in  rice  fields.  In  seedling  bioassays,  the  rate  of  seed 
germination  and  the  radicle  and  hypocotyl  lengths  of  barnyardgrass,  rice  and  weedy  rice  seedlings  were  reduced  as  the 
concentration  of  aqueous  water  extracts  and  volatile  organic  com-  pounds  increased  compared  to  the  control.  In  a  glasshouse 
experiment,  T.  tuberculata  leaf  powder  also  exhibited  effective  reduction  in  the  emergence  and  growth  of  weeds  in  rice  fields. 
Applications  at  rates  of  4  t  ha−1 completely suppressed emergence of barnyardgrass, sprangletop and smallflower umbrella. The 
chemical  com-  positions  of  extracts  and  volatiles  were  analyzed  by  GC–MS  and  HS-SPME-GC–MS. The results showed that 7 
of  43  components  in  the  leaf  aqueous  extract,  as  compared  to  5  of  15  compounds  in  the  stem  aqueous extract, are known to be 
toxic  compounds.  Moreover,  eight  main  volatile  organic  compounds  were  identified,  which  accounted  for  97  and  95%  of  the 
whole  fresh  and dry leaf volatiles, respectively. We observed qualitative and quantitative differences in the compounds present in 
the  dry  and  fresh  leaf.  Confocal  laser  scanning  microscope  images  showed  that  the volatile emissions and aqueous extracts also 
inhibited  the  main  root  diameter,  and the number and elongation of root hairs of tested weeds in rice fields. These results suggest 
that  T.  tuberculata  con-  tains  a  significant  source  of  plant  growth  inhibitors. Hence, it can be used as a mulch to suppress weeds 
in rice fields and for developing new herbicide based on phytotoxic compounds release by this plant. 
© 2015 SAAB. Published by Elsevier B.V. All rights reserved. 
1. Introduction 
Rice  (Oryza  sativa  L.)  is  the  most  widely  consumed  food  for  more  than  557  million  people  in  Southeast Asia (IRRI, 2009). 
Weed  infesta-  tions  are  recognized  as  a  serious  biological  constraint  to  rice  production  in  both  lowland  and  upland ecosystems 
and  in  all  seasons  (Ni  et  al.,  2009).  The  reduction  in  manual  weeding  because  of  the  high  labor  costs  has  been  accompanied 
globally  by  intensive  use  of  synthetic  herbi-  cides.  However,  the  continuous  use  of  herbicides  has  led  to  the  evolution  of 
herbicide  resistance in weed species (Beltran et al., 2012), increasing costs of production, environmental contamination (Mahajan 
and  Chauhan, 2013), unsafe agricultural products and adverse effects on human health (Khanh et al., 2005). These problems have 
caused  an  in-  terest  among  researchers  to  explore  alternative  methods  for  weed  man-  agement  with  a  lower  environmental 
impact. 
Allelopathy is defined as an interaction among plants by chemical pathways. Living or dead plants with allelopathic properties 
release  toxic  substances,  collectively  known  as  allelochemicals,  through  root  exudation,  volatilisation,  leaching  and 
decomposition  of  plant  materials  (Rice,  1984).  Volatilization  from  the  aboveground  parts  of  the  plant  is  one  of  the  major 
releasing  modes  (Li  et  al.,  2011).  The  incorporation  of  plant  parts  that  release  allelopathic  substances  as  a  part  of a weed man- 
agement program can be exploited for sustainable cropping systems (Chon and Kim, 2004). 
Natural  compounds  offer  alternative  weed  control  options  that  may  contribute  to  the  reduction  in  the  use  of  commercial 
herbicides  (Haig  et  al.,  2009). Hence, there has been increasing interest in natural plant products in herbicide discovery programs 
(Duke et al., 2002). 
Malaysia  has  been  classified  as  one  of  the  top  rich  countries  in  terms  of  biodiversity (Eswani et al., 2010). There are 15,000 
plant  species,  of  which  about  10%  are  known  to  be  medicinal  (Hanum  et  al.,  2001). Nevertheless, only a few studies have been 
reported  regarding  the  iden-  tification  of  allelopathic  plants  and  associated  allelochemicals  in  this  country  (Ismail  and  Sugau, 
1993; Ismail and Chong, 2009; Toosi and Bakar, 2012). The phytotoxic effects of volatile compounds released by 
http://dx.doi.org/10.1016/j.sajb.2015.04.011 0254-6299/© 2015 SAAB. Published by Elsevier B.V. All rights reserved. 
Contents lists available at ScienceDirect 

South African Journal of Botany 


journal homepage: www.elsevier.com/locate/sajb 
 
plant issues have been scarcely examined (Barney et al., 2005; Eom et al., 2006; Zhang et al., 2012). 
Tinospora  tuberculata  (Tinospora  rumphii  Boerl  or  Tinospora  crispa),  Malay  name:  Batawali,  belongs  to  the  family 
Menispermaceae,  and  is  a  traditional  medicinal  plant  (Forman,  1981).  It  is  a  wild  plant  that  grows  in  primary  rainforests  in  all 
parts  of  Malaysia,  Thailand  and  Indonesia.  We  speculated  that  T.  tuberculata  has  enough  allelopathic  po-  tential  to  contribute 
towards weed management in rice cultivation systems. 
Water  soluble  and  volatile  allelochemicals  released  by  the  aerial  organs  of  this  plant  have  not  been  known.  Although, there 
are  a  few  studies  that  dealt  with  allelopathic  activity  of  methanol  extracts  of  T.  tuberculata  plant  parts  and  identification  of 
phytotoxic  compounds  (Pukclai  and  Kato-Noguchi,  2012;  Kato-Noguchi et al., 2014; Aslani et al., 2013; Aslani et al., 2014). To 
date,  no  experiments  have  been  con-  ducted  to  assess the allelopathic potential of T. tuberculata for weed sup- pression in paddy 
soils.  Therefore,  a  combination  of  the  laboratory  and  glasshouse  bioassays  was  performed  to  evaluate  the  potential  of  allelo- 
pathic  activity  of  T.  tuberculata  mulch  on  the  emergence  and  growth  of  natural  weeds  in  rice  fields  and identify the phytotoxic 
volatile compo- nents and water soluble compounds derived from T. tuberculata tissues for developing a new herbicide. 
2. Materials and methods 
2.1. Test materials 
T.  tuberculata  Beumee  plants  used in this study were obtained from the Herbal Garden of Universiti Putra Malaysia (02°59′ 
N,  101°43′  E  and  64  m  above  sea  level),  Selangor,  Malaysia.  Mature  plants  (excluding roots) were harvested, cleaned several 
times  with  tap  water  and  air-  dried  for  3  weeks.  The  plants  were  separated  and  bulked  into  the  two  major  parts,  leaf  and stem. 
Both bulked plant parts were then ground into a fine powder in a laboratory blender and sieved through a 40 mesh sieve. 
Two  common  weeds  in  rice  fields  were  tested  for  inhibitory  activity  of T. tuberculata in the seedling bioassays. Commercial 
seeds  of  barnyardgrass  (Echinochloa  crusgalli  (L.)  Beauv.)  and  weedy  rice  (O.  sativa  L.)  were  purchased  from  Herbiseed 
Company, London, United Kingdom. The germination rates of the seeds were between 80 and 100%. 
The  soil  used  in  the  glasshouse  experiment  was  collected  from  Tanjung  Karang rice growing area, Selangor, Malaysia, at 10 
cm depth. The soil was mixed well to uniformly spread the weed seeds density in the whole paddy soil. 
2.2. Extraction procedure 
The  phytotoxic  activity  of  T.  tuberculata  Beumee  on  the  selected  weeds  was  investigated  using  aqueous  (water)  extracts. 
Leaves  and  stems  of  T.  tuberculata  (each  measuring  200  g  dry  weight)  were  soaked  in  1000  mL  of  distilled  water  in  conical 
flasks.  The  conical  flasks  were  then  wrapped  with  parafilm,  and  shaken  in an orbital shaker at room temperature (24–26 °C) for 
48  h.  The  solution  was  filtered through four layers of cheese cloth to remove the debris and then centrifuged at 3000 rpm for 1 h. 
The  supernatant  was  filtered  through  Whatman  no.  42  filter  paper.  To  prevent  microorganism  growth,  the  solution  was filtered 
again through 0.2 u 15 mm syringe filters (Phenex). 
Each  stock  extract  of  the  stem  and  leaf  of  T.  tuberculata  was  diluted  with  sterile  distilled  water  to  obtain  extract 
concentrations of 6.25, 12.5, 25, 50, and 100 g L−1 for seedling bioassay testing. 
2.3. Laboratory bioassays 
Seedling development bioassay was carried out to determine differ- ential phytotoxicity of aerial parts of T. tuberculata 
Beumee (leaf and 
133 F. Aslani et al. / South African Journal of Botany 100 (2015) 132–140 
stem)  on  germination  and  early  growth  of  the  tested  weeds.  Seeds  were  surface  sterilized in a 1:10 (v/v) dilution of commercial 
hypochlo-  rite  bleach  for  5  min  and  rinsed  several  times with distilled water. Thirty seeds of weedy rice and barnyardgrass were 
placed  in  two  layers  of  fil-  ter  paper  in  sterilized  90  ×  15  mm  petri  dishes.  5  mL  of  the  extracts  at  the  different concentrations 
(6.25, 12.5, 25, 50, and 100 g L−1) or dis- tilled water as control was applied to the petri dishes. 
The  phytotoxic  activity  of  volatile  compounds  released  by  dry  and  fresh  leaves  of T. tuberculata was evaluated. The volatile 
bioassay  was  carried  out  based  on  the  method  of  Zhang  et al. (2012). Briefly, thirty seeds of barnyardgrass and weedy rice were 
placed  on  Whatman  no.  1  filter  paper  wetted  with  5  mL  distilled  water  in  a  500  mL  glassflask.  Col-  lected mature leaves were 
hand-crushed  and  directly  wrapped  in  cheesecloth  at  amounts  of 0, 20, 40, and 60 g. Leaf water content was calculated based on 
the method of Sims and Gamon (2002). Ground dry leaves at the amounts of 0, 7, 14 and 21 g which were equivalent to 0, 20, 40, 
60  g  fresh  leaves  respectively,  were wrapped in cheesecloth as mentioned above. Each wrapped sample was suspended in a glass 
flask, which was then sealed with parafilm. 
All  petri  dishes  and  sealed  flasks  were  placed  in a growth chamber at a 12 h day/12 h night photoperiod with temperatures of 
25  and  20  °C,  respectively.  Germination  percentage,  radicle  and  hypocotyl  lengths  were  measured on all seedlings in each petri 
dish  and  sealed  flask  at  7  days  after  seeding.  The  inhibitory  effect  on  germination,  and  radicle  and  hypocotyl  lengths  was 
calculated using the following equation: 
I = 100 C−A ( )/C 
(Kordali  et  al.,  2009)where  I  is  the  amount  of  inhibition  (%),  C  is  the  mean  radicle  or  hypocotyl length of the control, and A is 
the  mean  rad-  icle  or  hypocotyl  length  exposed  to the aqueous extract and volatile treatments. Both bioassay tests were arranged 
in a completely random- ized design with four replications and the experiment was repeated twice. 
2.4. Root anatomy 
On  day  7  postplanting,  confocal  laser  scanning  microscopy (CLSM) was used to observe and monitor anatomical differences 
of  radicles  of  weedy  rice  and  barnyardgrass  treated  with leaf volatiles and aqueous extracts of T. tuberculata in comparison with 
the  control.  For  analysis  by  confocal  microscopy,  one  living  radicle  per  treatment  was  randomly  collected  and  washed  with 
distilled  water  and  then  mounted  on  glass  microscope  slides  and  observed  using  a  Leica  TCS  SP5  II  confocal  micro-  scope 
(Wetzlar,  Germany)  equipped  with  a  5×  (NA  0.3)  objective  lens  at  medium  scan  speed  (400  MHz)  at  excitation wavelength of 
405 nm and emission range of 415–485 nm. 
2.5. Effects of T. tuberculata Beumee leaf powder on natural weed growth in rice field soil 
The  paddy  soil  (six  kilogram  per  experimental  unit)  was  added  into  the  plastic  containers  (25  cm  up  diameter  ×  20  down 
diameter  ×  23  cm  length)  and  saturated  with  tap  water.  Leaf  powder  of  T.  tuberculata  was  applied  at  1,  2  and  4  t  ha−1  by 
scattering  the  powder  onto  the  soil  sur-  face  in  the  containers.  Pots  receiving  only tap water were used as con- trols. The plastic 
containers  were  maintained  for  60  days  at  ambient  temperature  (25–30  °C)  in  a  glasshouse at field 16, Faculty of Agricul- ture, 
Universiti  Putra  Malaysia,  Selangor,  Malaysia.  The  containers  were  watered  with  tap  water at two day intervals. The treatments 
were  arranged  in  a  randomized  complete  block  design  with  four  repli-  cations.  All  plants  were  harvested  and  plant  numbers, 
above ground dry weight (oven-dried at 75 °C for 48 h) and weed species were determined. 
 
2.6. Collection of volatile compounds by headspace solid phase microextraction technique 
Headspace  solid  phase  microextraction  (HS-SPME)  technique  was  used  to  collect  the  volatile  compounds  and  GC–MS 
analysis  was  utilized  to  identify  the  volatile  compounds  in  the  atmosphere  surrounding  the  T.  tuberculata  dry  and  fresh  leaves. 
The  mature  leaves  were  harvested,  cut  with scissors (1–2 cm long) and then crushed by hand. After weighing, foliar tissues (1 g) 
of  T.  tuberculata  were  placed  into  a  40  mL  clear  vial  and  sealed  with  a  PTFE-faced  silicone  septum  (Supelco,  Bellefonte,  PA, 
USA).  For  equilibration  of  headspace  volatile  constitu-  ents,  the  vial  was  placed  in  a  thermo  block  (Supelco,  Bellefonte  PA, 
USA)  at  35  °C  for  45  min.  The  SPME  fiber  (100  μm)  coated  with  PDMS  was  inserted  into  the  vial  for  20  min  at  room 
temperature  to  absorb  the  leaf  headspace  compounds.  After  extraction, the fiber was injected into the gas chromatography–mass 
spectroscopy for 25 min. 
2.7. Analysis of volatile and extract components by gas chromatography–mass spectrometry 
The  volatiles  and  aqueous  extract  compositions  were  determined  by  gas  chromatography–mass  spectroscopy  (GC–MS). 
Before  injecting,  the  water extracts were evaporated to dryness under vacuum at 40 °C using a rotary evaporator and diluted with 
80%  HPLC-grade  methanol.  GC–MS  was  carried  out  using  an  Agilent  6890  +  Agilent  5973  equipped  with  a 30 m × 250 μm × 
0.25  μm  HP-5MS (5% phenyl methyl siloxane) column and a Hewlett Packard 5973 Mass Selective Detector. The operating con- 
ditions were as follows: 
The  column was temperature-programmed from 50 °C (held for 3 min), raised at 5 °C/min to 200 °C (held for 3 min) and then 
increased  to  300  °C  (held  for  5  min)  at  a  rate  of 10 °C/min. Helium (He) at a split ratio of 1:20 and a constant flow rate of 1 mL 
min−1 was used as carrier gas. The mass spectral range was recorded from m/z 40 to 600 amu. For GC–MS detection, an electron 
ionization  system  with  ionization  voltage  of  70  eV  and  an  ion  source  temperature  of  200  °C  were  used.  The  injec-  tor and MS 
transfer line temperatures were fixed at 230 °C and 250 °C, respectively. 
The  relative amounts of the different compounds were calculated automatically from the peak areas on the ion chromatograms 
without  any  correction  factor.  Peaks  obtained  were  compared  to  data obtained from the GC–MS analysis. The constituents were 
identified  on  the  basis  of  computer  matching  of  mass  spectra  with those of the internal reference using the library search system 
HP-5872 (Hewlett-Packard). 
2.8. Statistical analysis 
In  the seedling bioassay and glasshouse experiments, treatments were arranged in a completely randomized design (CRD) and 
random-  ized  complete  block  design  (RCBD)  with  four replicates, respectively. In order to determine any significant differences 
among  treatments,  a  one-  way  ANOVA  was  carried  out  using  the  PROC  GLM  procedure  in  SAS  soft-  ware  (SAS  9.3,  SAS 
Institute  Inc.  Cary,  NC).  Separation  of  treatment  means  from  the  control  at  0.05  probability level was conducted using the LSD 
test,  as outlined in the SAS procedure (version 9.3). Effective doses capable of inhibiting 50% of germination, radicle growth and 
hy- pocotyl growth were calculated as EC 

50, EC 

50 and EC 

50, respectively. EC 

50, EC 

50 and EC 

50  values  were  calculated by Probit analysis based on percentage of inhibition. Ranking for each of the most 
active extracts and volatiles was determined as an index (R 

) using the following equa- tion for each plant tested: 


= EC 

50n ( germination ) + EC 

50n ( radicle ) + EC 

50n ( hypocotyl ) 
where R 

is  the  rank  of  the  weeds  (barnyardgrass  and  weedy  rice)  or  tested indices (germination, radicle and hypocotyl lengths) 
or treat- ments (dry leaf and fresh leaf volatiles, leaf and stem aqueous extracts). 
134 F. Aslani et al. / South African Journal of Botany 100 (2015) 132–140 
50n The EC 

are  the  concentrations  of  extract  or  vol-  atile  of  T.  tuberculata  that  inhibits  50%  of  germination, 
radicle and hypo- cotyl growth, respectively. The tissue extract, volatile, tested indices and tested weed species with the lowest R 

values are the most phytotoxic treatments and the most sensitive plant. The graphs were 
drawn with 
Fig. 1. Inhibition percentage of initial growth of weedy rice (a), barnyardgrass (b) and rice (c) at 7 days after treatment in a dose 
response to leaf and stem water extracts. 
50n, EC 

50n and EC 

 
SigmaPlot (version 12.5). The GC–MS analysis, laboratory and glass- house experiments were repeated twice and mean values 
were pooled. 
3. Results and discussion 
3.1. Inhibitory effects of T. tuberculata Beumee volatiles and aqueous extracts on test weed species 
The potential allelopathic contribution of aqueous water extracts of the aerial parts of T. tuberculata at different concentrations 
was  assessed  based  on  the  germination  and  initial  growth  of  barnyardgrass  (E.  crusgalli  (L.)  Beauv.),  rice  (O.  sativa  L.)  and 
weedy  rice  (O.  sativa  L.)  to  investigate  its  extensibility  and  possibility  for  use  as  natural  weed in- hibitors. The results revealed 
that  the  application  of  both  T.  tuberculata  leaf  and  stem  aqueous  extracts  significantly  reduced  percentage  of  ger-  mination,  as 
well  as  radicle  and  hypocotyl  lengths  of  the  tested  plants.  The  reductions  increased  with  the  increase  in  extract  concentration 
when compared to the control (Fig. 1). 
The  sprouting  of  barnyardgrass  was  significantly  reduced  (P  b  0.05)  at  all  tested  concentrations  of  leaf  aqueous  extracts. 
Conversely, only the highest concentration resulted in the 90% reduction of germination in weedy rice. Meanwhile, no significant 
reduction  was  observed  in  germi-  nation  when  the  T.  tuberculata  stem  extract  was  applied  at  low  concen- trations of 6.25, 12.5 
and  25 g L−1. On the contrary, when the concentration increased to 100 g L−1, the germination was reduced to a range of 8–20% 
in the indicator weed species. 
Considerable  allelopathic  effects  on  radicle  and  hypocotyl  growth  of  tested  weed  species  were  exerted  by  water  extracts  at 
various  concen-  trations.  The  radicle  elongation  of  species  was  significantly  reduced  (P  b  0.05)  by  both  aqueous  extracts  at 
concentrations  equal  or  higher  than  6.25  g  L−1.  The highest concentration (100 g L−1) of the leaf ex- tract resulted in no radicle 
development  for  barnyardgrass  and  weedy  rice.  On the other hand the 100 g L−1 of stem extract resulted in radicle reductions of 
64, 43 and 72% in weedy rice, rice and barnyardgrass, re- spectively (Fig. 1). 
The  present  study  was  designed  to  investigate  whether  the  volatile  compounds  obtained  from  T.  tuberculata  dry  and  fresh 
leaves  are  capable  of  inhibiting  the  growth  of  the  neighboring  plant.  Inhibition  of  barnyardgrass,  rice  and  weedy  rice  initial 
growth  was  evaluated  with  7,  15  and  21  g  dry  foliage  and  20,  40  and  60  g  fresh  leaves  of  T.  tuberculata.  Dry  and  fresh  foliar 
tissue  exhibited  adverse  effects  on  the  initial  development  of  seedlings. Increasing inhibition was observed with increasing rates 
of dry and fresh foliage placed in the enclosed en- vironment (Fig. 2). 
All  the  applied  concentrations  of  the  dry  leaf  had  no  significant  ef-  fects  on  the germination of the target weeds. In contrast, 
fresh  leaves  at  40  and  60  g  caused  significant  reductions  in  germination  of  barnyardgrass  by  30%  and  32%,  respectively. 
However, the fresh leaves did not significantly reduce the germination of rice and weedy rice. 
Significant  inhibitory effects on radicle and hypocotyl length (P b 0.05) in both weed species were observed in the presence of 
dry and fresh leaves of T. tuberculata as compared to the control (Fig. 2). 
The  radicle  elongation  varied  considerably  corresponding  to  the  dif-  ferent  dry  and  fresh  leaf  concentrations  (Fig.  2).  All 
doses  diminished  radicle  growth  of  barnyardgrass,  rice  and  weedy  rice.  Fresh  leaf  caused  reductions  of  23–67%,  53–83%  and 
54–97%  in  the  radicle  growth  of  rice,  weedy  rice  and barnyardgrass, respectively. However, dry leaf vol- atiles inhibited radicle 
growth of target species by an average of 61% at the highest concentration. 
Hypocotyl  growth  inhibition  increased  by  9,  21  and  28%  in  rice,  2,  8  and  43%  in  weedy  rice,  and  by  11,  45  and  44%  in 
barnyardgrass  with  20,  40  and  60  g  fresh  leaf, whereas it was 7, 10 and 20% in rice, 28, 29 and 3% in weedy rice and 13, 23 and 
36% in barnyardgrass when the seedlings were exposed to the dry leaf at concentrations of 7, 14 and 21 g dry leaf, respectively. 
135 F. Aslani et al. / South African Journal of Botany 100 (2015) 132–140 
Fig. 2.Inhibition percentage of initial growth of weedy rice (a), barnyardgrass (b) and rice (c) at 7 days after treatment in a dose 
response to dry and fresh leaf volatiles. 
 
The results indicate the phytotoxic importance of secondary metab- olites produced by T. tuberculata aerial parts on seed 
germination, radi- cle growth and hypocotyl growth of barnyardgrass, rice and weedy rice. The emitter density showed a positive 
correlation with the growth inhibition percentage. It could be a reflection of plant growth inhibitor concentrations being released 
by plant tissues. Higher concentrations of the aqueous extracts would contain greater amounts of inhibitory substances, and thus 
had a higher degree of inhibition. Similarly, Han et al. (2008) and Maharjan et al. (2007) reported that the degree of the 
phytotoxicity of ginger (Zingiber officinale) and Parthenium hysterophorus extracts was dependent on the concentration and that 
phytotoxicity increased with incremental extract concentration. It was also reported that with increasing concentrations of the 
Croftonweed (Ageratina adenophora) foliage, a higher herbicide impact of volatiles was observed in rice seedling roots (Zhang et 
al., 2012). The role of volatiles in growth reduction of neighboring plants has been evaluated by several researchers (Barney et 
al., 2005; Eom et al., 2006). 
The  50%  inhibitory  concentrations  (EC50)  of  each  tested  indices  for  both  species  are  shown  in  Table  1.  The  comparative 
analysis  of  extracts  derived  from  the  aerial  parts  of T. tuberculata showed the plant parts- dependent effects on seed germination 
and  initial  growth  of  tested  weeds  (Table  1).  The  effectiveness  of  the  stem  extract  was  lower  than  the  leaf  extract,  as  the  rank 
value  of  stem  extract  (10440)  was  much  higher  than  the  leaf  rank  value  (841)  in both weed species. In addition, EC50 and rank 
values  of  target  weeds  treated  by  dry  and fresh leaves showed that the fresh leave had a high allelopathic effect in comparison to 
that of the dry leave for all tested indices and plants (Table 1). 
Therefore,  the  magnitude  of  the  phytotoxicity  effects  at  the  same concentration levels in the test plants was dependent on the 
source  of  the  extract  (either  leaf  or  stem)  and  the  volatile  fraction  contained  in  the  dry  and  fresh  leaves.  Khanh  et  al.  (2005) 
similarly  reported  that  the  leaves  of  five medicinal and leguminous plants possessed the greatest herbicidal impact on the control 
of  weeds  in  rice  fields,  follow-  ed  by  roots  and  stems.  Zhang  et  al.  (2012) revealed that volatile allelo- pathic interference of A. 
adenophora  had  significant  adverse  effects  on  the  seedling  growth  of  upland rice. However, there is no study on the comparison 
of the allelopathic behavior between dry and fresh leaf. 
Analysis of the EC 
50 
results  showed  that  rice  was  only affected at higher concentrations of both extracts (630 and 1563 in leaf 
and  stem  extracts,  respectively)  and  volatiles  (1143  and  1207  in  fresh  and  dry  leaf,  respectively)  as  compared to barnyardgrass 
and  weedy  rice.  There-  fore,  it  was  apparent  that  different  concentrations  were  needed  to  sup-  press  different  species of plants. 
There  are  several  reasons  for  the  different  sensitivity  of  various  plant  species  to  inhibitory  compounds.  It  could  be  due  to  the 
physiological and biochemical characteristics of 
136 F. Aslani et al. / South African Journal of Botany 100 (2015) 132–140 
each  species  (Kobayashi,  2004),  the  seed  structure  (Hodgson  and  Mackey,  1986),  seed  coat  penetrability  (Hanley and Whiting, 
2005) and seed size (Machado, 2007). 
3.2. Effects of T. tuberculata Beumee leaf powder on natural weed growth in rice field soil 
Bioassays  showed  the  allelopathic  activity  of  T.  tuberculata  against  germination  and  growth  of  two  common  weeds  in  rice 
fields  under  lab-  oratory  condition,  but  the  presence  of  allelochemicals  in  the  plant  tis-  sues  may  not  imply  a  significant  toxic 
effect  in  the  soil  (de  Bertoldi  et  al.,  2012).  Therefore,  a  soil  study  performed  to  determine  the  weed  suppressive  ability  of  T. 
tuberculata leaves powder on emergence and growth of natural weeds in rice field soil. 
Incorporation  of  T.  tuberculata  leaf  powder  to  paddy  soil  has  resulted in effective suppression of natural weed growth in rice 
field  soil  (Fig.  3).  In  the  untreated  pots,  the  emergence  of  five major weeds in rice fields was observed, including barnyardgrass 
(E.  crusgalli  (L.)  Beauv.),  smallflower  umbrella  (Cyperus  difformis  L.),  weedy  rice  (O.  sativa  L.),  sprangletop  (Leptochloa 
chinensis  (L.)  Nees)  and flatsedge (Cyperus iria L.). At the lowest application rate (1 t ha−1), the reduction in the total number of 
weed  was  significant.  However,  the  number  of  O.  sativa  increased.  The  growth  of  L.  chinensis was completely controlled (Fig. 
3).  Furthermore, the total weed biomass was greatly decreased. The number of O. sativa grown on 2 t ha−1 leaf powder displayed 
a  sig-  nificant  reduction  compared  to  the  control.  In  addition,  complete  inhibi-  tion  of  E.  crusgalli  occurred  at  2  t  ha−1.  At the 
highest  dose  (4  t  ha−1),  a  significant  reduction  in  number  of plant and total biomass of all weed species was observed. O. sativa 
and  C.  iria  plants  were  reduced  to  only  3  and  2  plants  per  pot,  respectively.  While,  a  complete  control  of  the  other  three  weed 
species was recorded at this rate. 
The  results  confirm  that  the  natural allelopathic substances present in the incorporated leaf powders had significant effects on 
plants.  The  extent  of  growth  inhibition  was  proportional  to  the  applied  dose  and  was  species  dependent.  O.  sativa  and  C.  iria 
appeared  to  be  the  most  re-  sistant species to control. Volatile and water soluble compounds re- leased by leaf powder applied as 
mulch  affected  emergence  and  growth  of  weeds  in  rice  fields.  Volatile  organic  compounds  can  perme-  ate  into  the  soil  easily. 
Therefore,  these  may  play  a  noticeable  role  in  the  suppression  of  natural  weed  growth.  The  mulch  of  T. tuberculata can reduce 
weed  growth  by  release  of  allelochemical  compounds.  This  study  showed  a  new  application  of  T.  tuberculata  in  addition  to its 
use  as  a  medicinal  plant.  Other  researchers  have  also  introduced  medicinal  plants  as  natural  rice  field  herbicides  (Fujii  et  al., 
2003; Khanh et al., 2005; Nazir et al., 2007). 
Table 1 Allelopathic activity of leaf water extract and volatiles of fresh leaf compared to the stem water extract and dry leaf, 
respectively. 
Target plants 
Leaf water extract Rank Stem water extract Rank 
EC 
g50 
EC 
r50 
EC 
h50 
EC 
g50 
EC 
r50 
EC 
h50 
Values in g L−1 Barnyard 40.5 9.4 36.0 85.9 8049.3 52.1 144 8245.4 Rice 486.0 51.9 92.2 630.1 1286 105.4 171.9 1563.3 
Weedy 70.5 21.3 33.5 125.3 347.6 73.84 210.8 632.24 Rank 597 82.6 161.7 841.3 9682.9 231.3 526.7 10440.9 
Target plants 
Fresh leaf Rank Dry leaf Rank 
EC 
g50 
EC 
r50 
EC 
h50 
EC 
g50 
EC 
r50 
EC 
h50 
Values in g Barnyard 86.9 18.9 58.7 164.5 124.5 22.6 108.2 255.3 Rice 993.7 46.1 103.9 1143.7 993.7 61.7 152.1 1207.5 Weedy 
193.3 19.40 70.3 283 123.8 27.4 130.1 281.3 Rank 1273.9 84.4 232.9 1591.2 1242 111.7 390.4 1744.1 
Fig. 3. Effects of T. Tuberculata leaf powder on natural weed growth in paddy soil. 
 
3.3. Anatomical effects of treatments on the radicle development of weeds 
The epidermis and ephemeral roots have received great attention because they perform essential functions in the plant. They 
make close 
Fig. 5.Confocal laser scanning microscope images of barnyardgrass radicles treated by a) control, b) fresh leaf volatile (the dose 
of 40 g), c) dry leaf volatile (the dose of 14 g), d) leaf extract (the dose of 25 g L−1), and e) stem extract (the dose of 25 g L−1). 
137 F. Aslani et al. / South African Journal of Botany 100 (2015) 132–140 
Fig. 4. Confocal laser scanning microscope images of weedy rice radicles treated by a) control, b) fresh leaf volatile (the dose of 
40 g), c) dry leaf volatile (the dose of 14 g), d) leaf extract (the dose of 25 g L−1), and e) stem extract (the dose of 25 g L−1). 
contact with the soil and provide minerals and water to plants (Kramer and Boyer, 1995). 
The radicles of weedy rice (Fig. 4) and barnyardgrass (Fig. 5) grown with the fresh and dry leaves placed in the enclosed 
environment and 
 
that aqueous extracts exhibited remarkable morphological anomalies when 
water soluble leaf exudates of Dittrichia viscose 
suppressed root compared to the control. The effects became more and more intense 
length, lateral root development, cell division and the 
formation of when they were treated with fresh leaf volatiles and leaf water extract. 
root hairs in lettuce. Allelochemical stress reduced the 
main root diameter and the number and lengths of the lateral roots in both the target species. Reduced 
3.4. Identified substances in aqueous extracts and 
volatiles root hair density, diameter and length of the roots may have adverse ef- fects on the seedling's ability to compete and 
their attempts of establish- 
The observed allelopathic effects of the T. 
tuberculata Beumee sug- ment especially under limited water and nutrition resources (Levizou 
gested that the stem and leaf contain phytotoxic 
compounds. Identifica- et al., 2002). 
tion of the inhibitor components is important to explore 
new herbicide These results are in agreement with the findings reported by Zhang 
based on chemical compounds that can be extracted 
from T. tuberculata et al. (2012), who observed that the volatiles of A. adenophora fresh fo- 
tissues. Moreover, it can be useful to determine the 
phytotoxic interfer- liage showed an inhibitory effect on the number and length of root hairs 
ence mechanism on receiver plants. GC–MS analyses 
of the different of upland rice seedlings. Moreover, Levizou et al. (2002) also observed 
plant parts (stem and leaf) of T. tuberculata revealed the presence of 
Table 2 Relative percentage of components identified in the water extract of leaf and stem of T. tuberculata. 
Retention time Relative percentage Compound Literature Plant part 
4.69 43.69 2,3-Butanediol Ji et al. (2011), Reynolds (1977), Streiblová et al. (2012) Leave 4.69 29.81 2,3-Butanediol Ji et al. 
(2011), Reynolds (1977), Streiblová et al. (2012) Stem 5.73 0.89 Silane, ethoxytriethyl- Leave 8.05 0.99 Butyrolactone Leave 
8.10 0.38 2(5H)-furanone Leave 8.17 0.52 Butanoic acid, 4-hydroxy- Stem 8.42 0.56 2(3H)-furanone, 5-methyl- Leave 8.53 0.81 
2(3H)-furanone, 5-methyl- Stem 10.39 1.30 Phenol Blum et al. (1999) Leave 12.09 0.45 Oxazole, 2,4-dimethyl- Leave 13.03 
2.30 2-Pyrrolidinone Seal et al. (2009), Sun and Tang (2013) Leave 13.43 1.29 Furancarboxylic acid, methyl ester Gu et al. 
(2007) Leave 13.48 0.51 Furancarboxylic acid, methyl ester Gu et al. (2007) Stem 13.78 0.40 Hexane, 1,6-dibromo- Leave 14.96 
0.42 2,5-Pyrrolidinedione Leave 15.63 2.11 Thiazole Yang et al. (2014) Leave 15.62 1.01 Thiazole Yang et al. (2014) Stem 
16.15 0.55 1,2-Benzenediol, 3-methoxy- Leave 16.37 0.55 Oxime-, methoxy-phenyl- Leave 16.37 1.86 Oxime-, 
methoxy-phenyl- Stem 16.82 0.57 Oxirane, butyl- Leave 17.04 4.80 Indole Seal et al. (2004) Stem 17.05 5.07 Indole Seal et al. 
(2004) Leave 17.29 1.39 1,3-Benzenedicarboxylic acid Leave 17.29 1.57 1,3-Benzenedicarboxylic acid Stem 18.66 0.40 
Flamenol Leave 22.83 0.67 2-Methoxy-4-vinylphenol Leave 24.41 0.37 Phenol, 2,6-dimethoxy- Leave 24.57 0.49 1-Heptene, 
4-methyl- Stem 25.12 0.41 1,3-Diazine Leave 25.34 1.81 4-Methyleneproline Leave 25.94 9.31 3-Pentenoic acid, 4-methyl- Stem 
27.77 0.63 Silane, dimethylphenyl- Leave 27.88 1.24 Silane, dimethylphenyl- Stem 30.70 2.27 4-Hexenoic acid Leave 33.50 0.54 
Guaifenesin Stem 33.52 1.69 Guaifenesin Leave 35.69 0.68 1H-indole-3-ethanol Leave 35.93 0.51 Pyrazine, 
2-butyl-3,5-dimethyl- Stem 36.33 0.57 2,4-Heptadiene, 2,6-dimethyl- Leave 36.44 4.84 Guaifenesin Leave 39.18 0.81 
2-Pyrrolidinone, 1-(4-methylphe...) Leave 42.29 0.79 5-Amino-1-methyl-3-phenylpyrazole Leave 44.90 4.16 
3,4-Pyridinediamine Leave 46.51 0.58 Benzenemethanol, 3-amino- Leave 47.95 0.61 4-(Bromomethyl)cyclohexene Leave 50.02 
0.53 1-Dodecyne Yang and Lee (2012) Leave 50.46 0.45 9-Oxabicyclo[4.2.1]non-7-en-3-ol Leave 51.19 1.12 1-Dodecyne Leave 
52.36 0.79 5-Butyl-2-methylpyrroline Leave 52.69 1.12 Benzene, 1-fluoro-4-methyl- Leave 52.99 0.42 Norbornane, 2-isobutyl- 
Leave 53.23 2.00 3-Bromocamphor Leave 55.54 3.98 Ledol Kamatou et al. (2008), Sahaf et al. (2008) Leave 56.48 0.80 
Di-t-butylacetylene Leave 56.68 3.70 1-Nonyne Leave 56.92 0.85 Eicosane Liang et al. (2012), Jia et al. (2011), Zhang et al. 
(2010) Stem 59.75 0.83 Benzonitrile, 2-methoxy-6-methyl- Stem 
138 F. Aslani et al. / South African Journal of Botany 100 (2015) 132–140 
 
58  compounds  that  appeared  between  4  and  59 min (Table 2). The com- ponents of each plant-part extract demonstrated that the 
composition  of  components  differed  in  the  stem  and  leaf  water  extracts  of  T.  tuberculata.  The  leaf  water  extract  contained  43 
compounds,  while  the  stem  water  extract  had  15  compounds.  At  the  concentration  of  50  g  L−1,  the  number  of  known  toxic 
constituents  in  the  leaf  extract  was  7  compounds  (60.27%  of  the  total),  while  stem  extract  contained  only  5  known  toxicity 
compounds (36.98% of the total). 
To  date,  solid-phase  microextraction  (SPME)  has  been  used  exten-  sively  for  sample  volatile  emissions  emitted  by  plants 
(Musteata  and  Vuckovic,  2012).  Volatile  emissions  of  dry  and  fresh  leaves  of T. tuberculata were analyzed to better understand 
plant chemotaxo- nomic studies and for the identification of allelopathic volatile compo- nents emitted by the leaf. 
The  analyses  of  dry  and  fresh  leaves  enabled  identification  of  8  vola-  tile  substances  that  appeared  between  4  and  40  min 
(Table  3).  Six  main  volatile  components  of  the  fresh  leaf  amounting  to  97.6%  of  the  total  leaf  volatiles,  were  identified  as 
ethanolamine  (92.84%), Ala-Gly (2.38%) and thymol (1.51%), diphenyl ether (0.54), (−)-carvone (0.28) and 3-carene (0.05). The 
five principal constituents of the dry leaf were hydrazinecarboxamide (92.74%), 

-limonene (0.23%), 3-carene (0.18%), thymol (1.27%), and diphenyl ether (0.66%). 
There  were  quantitative  and  qualitative  variations  in  the  volatile  substances  identified  from  the  fresh  and dry leaf. It may be 
suggested  that  volatiles  of  fresh  leaf  (ethanolamine,  Ala-Gly  and  (−)-carvone)  were vapourised or converted to other substances 
during  the  drying  process. de Gouw et al. (1999) noted that enzymatic processes induced by the wounding of plant tissue are also 
involved  in  the  volatile  com-  pounds  release  from  the  drying  vegetation.  Other workers have also re- ported that some chemical 
transformations  occur  during  the  drying  process  (Asekun  et  al.,  2007).  Díaz-Maroto  et  al.  (2004)  believed  that  the cell damage 
during drying could be a reason for the change in the volatile organic compound emissions. 
Other  researchers  have  observed  alterations  in  the  volatile  composi-  tion  of  Ocimum  basilicum  (Díaz-Maroto  et  al.,  2003), 
Mentha  longifolia  (Asekun  et al., 2007), Laurus nobilis (Díaz-Maroto et al., 2002) and Mentha spicata (Díaz-Maroto et al., 2003) 
after drying under different methods. 
Variations  in  the  identified  substances  could  explain  the  stronger  in-  hibitory  effect  of  the  leaf  extract  and  the  fresh  leaf 
compared  to  the  stem  and  dry  leaf.  These  differences  lead  to  differential  inhibitory  and  biolog-  ical  effects  on  the  growth  of 
weeds  in  rice  fields.  Verdeguer  et  al.  (2009)  also  suggested  that  the  suppressive  effect  of  the  extracts  is  dependent  on  the 
chemical  composition  and  the  plants  on  which  they  are  applied.  The  allelopathic  activity  of  each  sample  was  found  to  be 
proportional to the number and type of compounds present. 
The  GC–MS  and  HS-SPME-GC–MS  analyses  showed that water ex- tracts of T. tuberculata leaves produced different results 
in  comparison  with  the volatiles. This study is the first to demonstrate the chemical composition of the aqueous water extract and 
leaf volatile profile of T. tuberculata. 
139 F. Aslani et al. / South African Journal of Botany 100 (2015) 132–140 
Table 3 Relative percentage of main volatile components identified in the dry and fresh leaf of T. tuberculata. 
Retention time Relative percentage Compound Literature Volatile emissions 
1.25 92.84 Ethanolamine Elmore (1980), Walsh et al. (2014) Fresh leaf 1.25 92.74 Hydrazinecarboxamide Feng (2003) Dry leaf 
3.47 2.38 Ala-Gly Dadon et al. (2004), Hao et al. (2010) Fresh leaf 8.6 0.05 3-Carene Dudai et al. (2004), Zahed et al. (2010), 
Singh et al. (1999) Fresh leaf 8.6 0.18 3-Carene Dudai et al. (2004), Zahed et al. (2010), Singh et al. (1999) Dry leaf 9.15 0.23 

-Limonene Barney et al. (2005) Dry leaf 15.64 0.28 (−)-Carvone Azirak and 
Karaman (2008) Fresh leaf 17.17 1.51 Thymol Szczepanik et al. (2012), Azirak and Karaman (2008) Fresh leaf 17.17 1.27 
Thymol Szczepanik et al. (2012), Azirak and Karaman (2008) Dry leaf 28.51 0.54 Diphenyl ether Towers and Arnason (1988) 
Fresh leaf 28.51 0.66 Diphenyl ether Towers and Arnason (1988) Dry leaf 
T.  tuberculatais  capable of producing and releasing a large number of water soluble and volatile toxic compounds into the soil 
and  thereby  may  also  affect  the  growth  of  other  plants  in  the  vicinity.  The  incorpora-  tion  of  dry  leaf  could  increase  weed 
biomass  reduction  and  may  de-  crease  the  use  of  synthetic  herbicides.  Hence,  this  offers  a  promising  source  of  eco-friendly 
natural  herbicide  for  sustainable  agriculture.  However,  additional  studies  are  required  to:  a)  validate  the  present  results  on  T. 
tuberculata  under  actual  paddy  field  conditions,  in  order  to  provide  applicable  recommendations  to  farmers  and  using  the 
allelochemicals  produced  by  T.  tuberculata  as structural leads for devel- oping future new herbicides. Moreover, experiments are 
also  needed  to  establish  the  appropriate  growth  stage  and  agronomic  and  environ- mental conditions under which this plant will 
produce maximum quan- tities of allelochemicals. 
Acknowledgement 
Many  thanks  go  to  Dr.  Samira  Bagheri  for  her  assistance  in  conducting  the  study.  The  authors  would  also  like  to  thank 
Long-term  Research  Grant  Scheme  (LRGS),  Food  Security  Project,  Ministry  of  Higher  Education,  Malaysia  (5525001)  and 
Fundamental Research Grant Scheme (07-01-13-1241FR) for providing financial support. 
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