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chelniosaik-Virus ... , 5. Rice stripe necrosis virus: a soil-borne
h[eribln[t jïìr den . -._
.-
..
rod-shaped virus
soil-borne virus
logical Society of
By C. FAUQUET, J.-C. THOUVENEL, D.FARGETTE &
ieat in Ontario. L. D. C. FISHPOOL
al, transmission, Phytovirologie, ORSTOM, B P V 51 Abidjan, Côte d'Ivoire
k mosaic virus.
1966). Studies on
est for resistance
35-152.
iv mosaic virus: SUMMARY
hyopndrological
of barley yellow A disease of upland rice known locally as 'crinkling rice disease' has been
hy toparh ological recorded for many years in a number of West African countries. This
disease was previously thought to be either bacterial in origin or a
Iiosaic virus and physiological disorder. Recently in the Ivory Coast, this disease has been
ogicnl Socieiy of found to be associated with a rod-shaped virus called rice stripe necrosis
t mosaic virus. virus (RSNV). The symptoms of the disease are: bright yellow stripes
along the leaves, necrosis of the leaves or of the whole plant, dwarfing,
ragu ngsmodus crinkling and reduced tillering. The percentage of infection varies greatly
sichtigung der according to the year and to the variety. Crop loss was estimated, for
n Forschungs-
Pflanzenzüch-
different varieties, to vary between 14% and 100%. The agent is sdil-borne
and a soil fungus vector of the order Plasmodiophorales, Pofymy.un
gramhis, is always associated with the diseased plants, both in the field and .
in laboratory transmission. The causal agent of the disease is not
mechanically transmissible from rice to rice (Oryza sativa), but only to
other local lesion hosts, and back transmission from local lesion hosts to
rice has never been obtained. The rod-shaped virus is 20 nm in width and
we have observed particles of three different lengths: 110-160, 270 and
3SO nm. An antiserum with a titre of 1/250 has been prepared and no
serological relationship was obtained with the several rod-shaped viruses
tested. Infected rice cells show virus-like aggregates and cytoplasmic
inclusion bodies, typical of rod-shaped viruses. RSNV has many properties
of the proposed furovirus group including hollow rod-shaped particles with
several components and transmission by a soil fungus. Furthermore, the
amino acid composition of the coat protein of RSNV particles is very
different from tobamoviruses and may be typical of 'furoviruses'.
INTRODUCTION
Until 1978, only one virus had been isolated from rice in Africa, rice yellow
mosaic virus (RYMV; Fauquet & Th
1 VIRUSES WITH FUNGAL VECTORS
THE DISEASE
72
i:]y years in West
ice ( ~ r y zsativa)
n
urate description of
riefly here. In its i
e levels of descrip-
if symptoms and the
le disease is its very
fter sowing severe
that the vector,
I imb, reduction of
kling distortion of
If infection occurs later thc plant does not die, but tillering will be Soil transmissior1 of t h
considerably reduced and will most often give only one very distorted and discrete, progressively
almost sterile panicle (Fig. 5-1(4)). If infection is incomplete, the plant will which was tcsted and 1.
grow one or niore tillers which compete with the infected tillers and will was always associated,
eventually produce healthy panicles. of a soil fungus, P.
t ransni ission cspe ri niel
the field (Fig. 5-2(1)).
Inciderice of the disease. Levels of disease incidence and their effects on 45% of rice seedlings v
growth and yield of infected rice have only been estimated in the Ivory a depth of O to 20 cm f l
Coast (Louvel s( Bidaux, 1977; Fauquet, unpubl.). Assessment of disease
incidence in a crop must take into account its impact on individual plants
and the frequency with which it occurs. The impact of the RSNV is
dependent on the age of infection of the plants, the number of infected
tillers on each plant, on the intensity of the symptoms on each tiller and on
the variety considered. I n a study made with three rice varieties, three
different stages i n the development of the disease were distinguished: from
21 days after sowing (DAS) to 39 DAS when the number of diseased plants
in the field increases. from 39 DAS to 45 DAS when there is a decrease in
the number of infected plants (this stage corresponds to thc end of tillerage
of the rice), and finally from 45 DAS to S5 DAS when the number of
infected plants remains constant. This apparent reversion of symptoms is a
result of competition froni healthy tillers. Within a collection of 30 varieties
tested in the Ivory Coast in 1977 and 73 tested in 1981 and 1983, the
percentage of infected plants ranged from O to 48% in 1977 (Louvel ¿Q
Bidaus, 1977) and from O to 100% in 1951 and 1983 (Fauquet, unpubl.).
For each set of observations, the niost susceptible varieties were Lung
Sheng 1 and its hybrids, including IR8. Crop losses with the three
susceptible varieties, estimated from the number of panicles, varied
between 76 and 92% for infected plants, and from 13 to 16% over the
whole plot.
74
IUCE smim NECROSIS VIRUS
Soil transniission of the tliscasc agent. The ficlcl spread of the disease in
cliscrctc, progrcssively cxpnncling patches, indicateci soil transmission,
w hich ivns t c st e cl a IId co n f i r ni e d by 1abora tory expe ri ni e n t s. The disease
was always xisociiited, i n the root cells of infected plants, with the presence
of a soil fungus, P. gmmirzis. All infected plants obtained by soil
transmission cxperinicnts developed the symptoms typical of the disease in
Ice and their effects on the ficld (Fig. 5-2(1)). In laboratory soil transmission experiments, up to
estimated in the Ivory 45% of rice secdlings \vere infected when the soil used was extracted from
. Assessment of disease a depth o f O to 20 cm from around infected plants in the field, as compared
3ct on individual plants
)act of the RSNV is
e number of infected
s on each tiller and on
: rice varieties, three
re distinguished: from
ber of diseased plants
there is a decrease in
to the end of tillerage
when the number of
sion of symptoms is a
lection of 30 varieties
1951 and 1953, the
) in 1977 (Louvel &
(Fauquet, unpubl.).
varieties were Lung
s e s with the three
of panicles, varied
13 to 16% over the
with 9% levels of infection in the soil extracted from the same depth Infection is limited to
around healthy plants. Contaminated soil, dried for 60 days, transmitted which enlarge and ¡i
the disease to 31% of seedlings tested. Using soil from pots containing symptoms. Symptom
plants which showed positive transiiJission, it was possible to obtain further appeared also to be r
positive transmissions, sometimes up to 100%. Soil transmission esperi- to achieve back tran
meiits \vere also positive when sterilized soil w s inoculated with the possible to obtain loc
washed roots of infected plants or with fungal zoospores released from N . beiirhariiiattu wht
infected roots into water arid concentrated by low-speed centrifugation. inoculum.
Seed transmission. Ti
THE VECTOR using several thousa
field. They were fror.
The presence of n soil-borne fungus infecting rice roots was demonstrated. IRAT 10, IRAT 1
using n lactophenol staining method (Britton & Rogers, 1963) (Fig. percentage of gerniir
5-2(2)). The size and shape of the cystosori (Fig. 5-2(3)) and plasmodia occurred (Fsuquet 6
observed in the root cells of infected rice suggested that the fungus
involved might be P. gratnirlis (Karling, 1968; Ledingham, 1939; Rao. The causal agent. R
1965). This hypothesis was reinforced by the fact that the fungi of this roots of infected ric
group have specific plant hosts and P. grmtitiis invades only graminaceous virus purification t
plants (Karling, 196s; Teakle, 19SO). Plants infected by virus from soil. alternate low and
either in natural or artificial conditions, always contained P. grcir?zitiis in butanol clarificatior
the cells of their rootlets. purification was pe
Transmission esperiments were performed with nematode vectors opalescent bands we
(Fauquet, unpubl.). Xiphitietm spp. were found in very small quantities in isolated bands disp
soil samples from contaminated fields but we were unable to correlate the viruses with 5% of
disease transmission with them. yield of purified viri
Rice mealybug, Ripersiu o r y t ~which
, is known to induce crinkling and infectious on the lo
malformations of the affected plants, were also tested as a vector of RSNV. bands observed in s:
Rice mealybugs, bred on rice seedlings infected by RSNV, were lengths: 110-160, 2
transferred to healthy rice seedlings. The symptoms that developed were rod-shaped, with a
,; not those of RSNV (Fauquet & Thouvenel, 1953). width of about 20 n
Electron microscopy
THE VIRUS virus induces cytopl
rod-shaped viruses
Mechanical inoculation. The virus is not mechanically transmissible from Thouvenel & Fauq
rice to rice or perhaps only with an extremely low rate of transmission. One number of cells CO
positive plant was obtained from more than ten thousand plants tested paracrystalline cytc
(Fauquet & Thouvenel, 1953). Many different inoculation buffers, inclusions were pre
conditions, techniques and inoculum sources (young leaves and rootlets experimentally infe
from field and laboratory infected plants) were tried without success.
Nevertheless, it is possible to obtain local lesions in leaves of Clietiopodizct?t Serology. The viri
uritaratiticolor or Nicotiana bett/ltatniann inoculated with infected crude prepared with the
rice sap. The local lesions produced on C. aniarotificolor are very similar to <.’
.- . . observed when t h c
those induced by peanut clump virus (Tliouvenel 22 Fauquet, 1981). g.
.... . ’ toinato niosi1ic tob
’.”.
.. .-
76 i.
.P.’
,
...
'.... ..-.__.._
....'c
~ ...
FUNGAL VECTORS
VIRUSES \\'17'H
HISTOGRAM OF
I 7 I I 71 n
n n
P A R T I C L E L E N G T H OF R S N V
1
RSNV
1
seem to reflect the epidemiology of the fungal vector. Apparently, this Surrey, Englan,
disease is present over wide areas of West Africa but it does not appear to PLUMB, R. T., CATHER
be spreading and occurs a t a relatively low frequency. Thc range of varietal virus of oats i n
so
RICE STRIPE NECROSIS VIRUS
REFERENCES
17)
., only soil-borne avec la maladie nécrotique à rayure du riz en Côte d'Ivoire. Conpm Rendiis
lden stripe virus de I'AcadPtnie des Scietices, Série 0, 296, 575575.
FAUQUET, C., DEJAKDIK, J. T I f O W E N E L , J.-C. (1986a) Evidence that the amino acid
are fungus- composition of the particle proteins of p h n t viruses is characteristic of the
hlV and OGSV virus group. I. Multidimensional classification of plant viruses. Itifervirology
CISBWMV does 25, 1-13.
ce but cannot be FAUQL'ET, C.. DEJARDIN, J. R: THOUVESEL, J.-C. (1986b). Evidence that the amino acid
not serologically composition of the particle proteins of plant viruses is characteristic of the
virus group. II. Discriminant analysis according to structural, biological and
classification properties of plant viruses. Intervirology 25, 190-200.
crotic yellow vein FRABCII, R. I . B., ~ ~ I L F ER., G . 9: HATTA, T. (19S.5). A t h of Plnnt Viricscs, Vol. II.
nodal length, but CRC Press, Boca Raton, Florida, USA, 254pp.
:he two are not ISOUYE, T. B FUJII, s. (1977) Rice necrosis mosaic virus. CMZIAAB, Descriptions of
plant r~iricsesNo. 172, 4pp.
JACISOS. A . o. s: LANE, I.. c. (1951). Hordriviruses. In Nandbook of Plant Virils
ts is composed of [ttfectiotrs and Compnrative Diagnosis, 565-626. Ed. E. Kurstak, Elsevier,
270 and 380 nm. North-Holland Biomedical Press, Amsterdam, Holland.
,tial for infection. K A R L I F G , J. s. (1965). The Plnsnzodiopiiorules. Ed. Hofner Publishing Company,
nber of genomic New York, 256pp.
)viruses as judged LEDINGHAM, G . A . (1939). Studies on Polyttiysn graminis, n. gen. n. sp., a
esboise, Fargette plasmodiophoraceous root parasite of wheat. Canadian Joiirtial of Research
17, 3s-51.
Rice stripe virus. In Rice Virils Dbeuses, pp. 52-85. Ed. IRRI,
L I N G , K. c. (1972).
Ily important for Los Banos, Philippines.
' the disease on LOUVEL, D. 9: BIDAUX, J.-M. (1977). Observation d e nouveaux symptômes
thal. Conditions pathologiques sur des varietés precoces de riz en Côte d'Ivoire. Agronomie
'ectly known but Tropicale, XXXII 3, 257-261.
o u , s. H. (1972). Rice Diseases. Commonwealth Mycological Institute, Kew,
Apparently, this Surrey, England, 14-22.
les not appear to PLUMB, R. T., CATHERALL, P. L., CHAMBERLAIN, J. A. & MACFARLANE, I . (1977). A new
range of varietal virus of oats in England and Wales. Annales Re Phytopathologie 9, 365-370.
81
VIRUSES WITH FUNGAL VECTORS
B e et necrotic ye I Io w
sugar-beet rhizomani
Po1ymy.w betue, has
decade. BNYVV has
four different lengths
by nieans of electror
processing methods. i
single-stranded right-]
of 4 turns, involving
possesses a segmente
ately. The four R N A
been cloned and sequ,
determined; RNA-3 L
play an important rol
BNYVV isolates f
have closely similar a
the method of choice
are not unambiguou:
means of diagnosis ir
82