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Artificial Ventilation Modeling using Neuro-Fuzzy Hybrid System

Conference Paper · January 2006


DOI: 10.1109/IJCNN.2006.247215 · Source: DBLP

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2006 International Joint Conference on Neural Networks
Sheraton Vancouver Wall Centre Hotel, Vancouver, BC, Canada
July 16-21, 2006

Artificial Ventilation Modeling using Neuro-Fuzzy Hybrid System


F. Liu, G. S. Ng, Senior Member, IEEE, C. Quek, Member, IEEE, and T. F. Loh

fuzzy logic have been proposed, including FuzzyKBWean [8],


Abstract—Artificial ventilation is a crucial treatment to the FAVeM [9], and SIVA [10].
patients in Intensive Care Unit. However, as the ventilator An effective and compact rule set does not only reduce the
increasingly becomes more complex, it is not easy for less modeling error, but also increase the system’s interpretability.
experienced clinicians to control the settings. The objective of The rules derived from experts and defined manually have
the paper is to model the FiO2 settings by clinician, using a
been used to control ventilator [11][12]. However, as the
neuro-fuzzy hybrid system. Two important issues, the
interpretability and accuracy are balanced through an iterative system becomes more complex, it is difficult to manually
reduction and tuning process. Fuzzy sets are merged according define and tune the rules. The rules derived from the
to their Hebbian importance, while membership functions are interview with experts are usually inaccurate and biased the
tuned through the Least-Mean-Square (LMS) algorithm. expert. Thus it is desirable to find a way to automatically
Effective, compact and interpretable fuzzy rules are generated formulate and tune the rule base. Neural network (NN)
and tested on real ventilation data, benchmarked with other
[13][14][15] is a learning machine designed to model the
neuro-fuzzy systems.
brain function and imitate the human learning capabilities. It
I. INTRODUCTION has good adaptivity where their synaptic weights can change
with the surrounding environment. However, as it is a black
A rtificial ventilation is essential treatment for patients
who require breathing assistance in Intensive Care Unit
(ICU). It is used to maintain the arterial oxygen and
box model, common knowledge is not easy to be extracted
and interpreted from a trained neural network. The hybrid of
FS and NN can effectively integrate the high-level inference
carbon dioxide levels of the patients. At hospitals, the settings
ability of FS and the low-level learning capability of NN. The
of ventilator are manually adjusted by clinician, based on the
patient’s physiological status. The adjustment is dependant fuzzy rules can be tuned through the learning algorithm of
on their clinical experience and expert knowledge. However, NN, and knowledge can be derived from the system.
as new technologies develop, ventilators are increasingly Accuracy and interpretability are two issues in neuro-fuzzy
more and more complex and it is not easy for clinicians with system. They are important in artificial ventilation modeling.
experience to use them effectively. Thus there is a need for Firstly, the modeling accuracy reflects its ability to set the
the automation of the specific decision-making process to variables, which influence the treatment of the patient.
assist the clinicians. Secondly, the derived rules should be understandable and
Artificial Intelligence (AI) is a study to emulate human interpretable to the user, so as to assist the ventilation.
intelligence using computational technology. It has been However, these two requirements usually cannot be satisfied
successfully applied to various medical applications [1]. simultaneously. There is a need to strike a balance between
Many artificial ventilation system based on AI techniques them.
have been proposed, including VM [2], ESTER [3], The objective of the paper is to model the setting of the
KUSIVAR [4], VentEx [5], VentPlan [6], NeoGanesh [7]. FiO2 performed by a clinician in the artificial ventilation
As one of the AI techniques, fuzzy system has been widely using a neuro-fuzzy hybrid system. The modeling accuracy
used in biomedical applications in recent years. In fuzzy and interpretability are compromised through an iterative
modeling, the numerical data can be interpreted in terms of tuning and reduction process. The fuzzy rules are merged and
linguistic concept, which are understandable to human user. reduced according to their Hebbian importance, which
The knowledge, in the form of fuzzy rules, can be extracted
reflects the coverage of the data by the rule. Interpretable
from the system, and provides assistance to the clinicians in
rules are derived from the system and can be used to assist
practical use. Expert’s knowledge can also be incorporated
clinician to set the variables.
into the system. In addition, fuzzy systems are more tolerant
to the noise thus making them more robust. These advantages
make the fuzzy system (FS) suited in medical
decision-making. Some ventilator control systems based on II. EXPERIMENT DESIGN

A. Data
F. Liu, G. S. Ng, and C. Quek are with Centre for Computational The data employed in the paper is collected from the KK
Intelligence, Nanyang Technological University, School of Computer Women’s and Children’s Hospital of Singapore. They
Engineering, 639798, Singapore. (e-mail: fliu@pmail.ntu.edu.sg; represent a 20 day’s records for a patient in the hospital under
asgsng@ntu.edu.sg, ashcquek@ntu.edu.sg;)
T. F. Loh is with KK Women’s and Children’s Hospital, 229899,
the BIPAP ventilation mode. The sampling time of the record
Singapore. He is with the Department of Paediatric Medicine. (e-mail: is about an hour. It consists of measured patient-status
lohtf@kkh.com.sg)

0-7803-9490-9/06/$20.00/©2006 IEEE 5166


variables and the setting variables by clinician. The centroid and width of the j th labeled fuzzy set of the output is
patient-status variables include HR (Heart Rate), RR
(Respiratory Rate), SaO2 (Oxygen Saturation), MAP (Mean denoted as c IVj and δ jIV . Assuming the multiply and sum
Airway Pressure) and ETV (Expiratory Tidal Volume). The operator are used as the T-norm and S-norm operators, the
setting variables include FiO2 (Fraction of Inspired Oxygen), output of the system can be written like in (2) and (3):
IE (Inspiratory / Expiratory Ratio), PEEP (Positive End  n IV   n IV IV 
Expiratory Pressure), PIP (Peak Inspiratory Pressure), RRset o =  ∑ coL δ IV
oL × f k   ∑ coLk δ oLk  (2)
 k =1   k =1 
k k

(set Respiratory Rate) and TVset (set Tidal Volume).


{( )}
m

) (δ
2 2
f k = ∏ exp − xi − ciII,iLk (i ) II
i , iLk ( i ) (3)
i =1
B. Method
where o is the output; n is the number of rules; m is the
The key strength of the fuzzy system (FS) is its ability to
input dimension; the input data is X = [ x1 , x2 ,… , xm ] ; f k is
model the dynamics of a problem using a set of high-level
IF-THEN fuzzy rules, where the main merit of neural the firing strength of the k th rule for data.
network (NN) is its low-level learning capability. The interpretability and accuracy are two important issues
In this paper, the Mandani-type fuzzy system [16], other in neuro-fuzzy modeling. Interpretability refers to the
than the Takagi-Sugeno-Kang (TSK) fuzzy system [17], is capability of the fuzzy model to express the behavior of the
employed due to its ability to produce interpretable rules. The system in an understandable way, while the accuracy refers to
fuzzy rule in Mandani system has the form in (1). the capability of the fuzzy model to faithfully represent the
IF x1 = A and x2 = B THEN y = C (1) system [18]. However, interpretability and accuracy are
where x1 and x2 are input variables; y is output variable; usually pursued for contradictory purposes and sometimes are
A , B and C are fuzzy sets. dipoles apart as the system complexity increases. When
The hybrid of the FS and NN is shown in Fig. 1. It is a tuning the membership functions (MF) of the rules to
5-layer neural network, including input, condition, rule node, diminish the modeling error, the interpretability of the rules
consequence, and output layers. Each input variable in the FS may be degraded during the tuning process, where the fuzzy
corresponds to one input node and each fuzzy set for the input sets can drift closer to each other and may end up overlapping
variable corresponds to a neuron in the condition layer. each others [19]. An iterative process is proposed in the paper
Similarly, one output node for each output variable, and the to deal with the problem, shown in Fig. 2.
consequence layer consists of the nodes for its fuzzy sets. In
the rule node layer, each rule node is generated for a fuzzy
rule. There are links for each input/output variable to each of Initial rule generation MF tuning (lower
their fuzzy sets. The fuzzy rules are represented in the learning rate)
network by linking the condition, rule node and consequence
layers. Rank rule

R1 : IF x1 = A1 and x2 = B1 THEN y = C1 Merge MF Stop


FS: criteria
R2 : IF x1 = A2 and x2 = B2 THEN y = C2

A1 Remove redundant and


conflicting rules & reduce
x1 feature MF tuning
A2 R1 C1
y
NN:
Fig. 2. Chart of iterative tuning and reduction process
B1 R2 C2
x2
B2 Rule
Input Condition Consequence Output 1) Initial rule generation
node
layer layer
layer
layer layer At the beginning of the iterative process, initial rules are
generated to cover all the training data samples. That is,
Fig. 1. The hybrid of fuzzy system and neural network. whenever a new data sample is presented, if there is no rule in
the rule base, or if the strength of the rule with the largest
firing strength is below a specified threshold, a new rule node
For the k th rule, the label of the fuzzy set of the i th input will be created with the centroid of the sample. The initial
variable is denoted as iLk ( i ) , and the label of the fuzzy set of width of each fuzzy set is proportion to the range of the
the output variable as oLk . Gaussian membership function is variable. This threshold controls the coverage of data space
used in each fuzzy set. For the condition layer, the centroid by the rules and affects the number of initial rules. The larger
and width of the j th labeled fuzzy set of the input i is the threshold the less number of the rules will be generated,
and vice versa.
denoted as ciII, j and δ iII, j . For the consequence layer, the

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2) Rule ranking via Hebbian importance IˆC = IˆA + IˆB (9)
For the i th data sample ( X i , yi ) and the k th rule, define
the degree of the rule to cover the sample in (4) 4) Reduce rules and features

{(
Ck ,i = f k × exp − yi − c IV
oLk ) (δ ) }
2
IV
oLk
2
(4)
In the temporary rule set pool, if there is only one
membership function within one dimension, this dimension
The Hebbian importance of the k th rule is defined in (5). (feature) will be removed; if there is any rule that has the
n
same conditions and consequences with others, it is removed;
I k = ∑ ck ,i (5) if there are any conflicting rules that have equivalent
i =1 conditions but different consequences, the one with the
This is based on the Hebbian learning rule [21]. If all the higher degree of importance is preserved and others are
input-output samples repeatedly fire a rule by the product of deleted. Finally, the original rule set is replaced by the
their firing strength and the membership values, and the temporary rule set pool.
accumulated strength surpasses that of other rules, it indicates
the existence of such a rule. In another view, the accumulated 5) Membership function tuning
strength exerted by the sample pairs reflects the degree of The least-mean-square (LMS) algorithm is used in the
coverage of them by the rule. The rule that covers the samples paper for the tuning of membership functions.
to a higher degree will have greater influence on the modeling Assuming the error function is
accuracy. This is due to the fact that when the MFs of the rule 1 n
E = ∑ ( oi − yi )
2
(10)
or the rule itself are merged or deleted respectively, it will 2 i =1
result in a larger change in the fuzzy inference results and the error at i th sample is
significantly affect the modeling accuracy. Thus such a rule is
ei = oi − yi (11)
of greater importance.
th th
At the step, all of the rules are sorted in a decreasing order For the j input dimension of the k rule, the centroid
of their Hebbian importance. c II
and the width δ II
are updated using (12) and
j , iLk ( j ) j , iLk ( j )

3) Membership function merge (13).


A temporary rule set pool is created and initialized as null. ∂ei2
∆c IIj ,iLk ( j ) = −γ (12)
The ordered rules in the original rule set are presented ∂c IIj,iLk ( j )
sequentially. The fuzzy set of the current presented rule in
∂ei2
each dimension is added into the rule set pool, or merged with ∆δ jII,iLk ( j ) = −γ (13)
that of the previously presented rules, based on the degree of ∂δ jII,iLk ( j )
overlap of the fuzzy sets. Subsequently the newly added or where γ is the learning rate.
merged fuzzy sets will be linked together to formulate a new The updating formula for centroid and width of the output
rule in the rule set pool. dimension is similar to that in the input dimensions.
For two fuzzy sets A and B , the degree of overlap is
defined in (6).
6) Stop criteria
S ( A, B ) = max { A ∩ B A , A ∩ B B } (6) If the training error after one reduction and tuning cycle, is
much larger than that after the previous cycle, the system will
The A , B and A ∩ B can be computed using the
stop and the rule set after the previous cycle is restored as the
centroid and width of the two fuzzy sets [21]. final rule set. That is to say, denote the training error after the
During the merging process, some fuzzy sets may be i
i th cycle as Etrain . If i exceeds the maximum iteration imax ,
shared by several rules. Changing a shared fuzzy set is
equivalent to modifying some rules simultaneously, which
i +1
or Etrain > η Etrain
i
, the iterative reduction and tuning process
will exert much influence on the performance of system. Thus, stops. The η is a human defined parameter that controls the
the fuzzy sets within a rule may have different importance too. reduction of the system complexity, based on the fact that if
Denote the importance of a fuzzy set F as IˆF . The IˆF is the number of rule is less than what that is necessary, the
training error will become much larger than before.
initialized with the value of importance of its associated rule The proposed system reduces the fuzzy rules through the
and changed during the merging process. Hebbian ordering of the rules, thus is named a
Given two fuzzy sets A and B with the centroid, width Hebbian-Rule-Reduct system.
and importance of c A , δ A , IˆA and cB , δ B , IˆB respectively,
the merged fuzzy set C is calculated using (7)-(9). C. Experiment setup
C (
c = Iˆ c + Iˆ c
A A Iˆ + Iˆ
B B )( A B)(7) It is crucial to provide adequate oxygenation of the arterial
blood for the maintenance of life. Thus the arterial oxygen
δC = ( Iˆ δ
A A + IˆBδ B ) ( Iˆ
A + Iˆ )
B (8) tension should be maintained of a proper level. The arterial
oxygen tension is controlled by adjusting the FiO2. The

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objective of the experiment is to model the manual setting of in the CV1 and CV2. In CV3, only the RSPOP produce less
FiO2 by clinician using a neuro-fuzzy hybrid system. number of rules than the Hebb-Rule-Reduct. From the
Among all of the variables in the medical records, the average number of rules in the last column, the proposed
SaO2, FiO2, RR, PEEP, set or measured at current time step, system produces the least among all these Mandani systems.
are used to predict the value of FiO2 at next time step. To Fig. 4 – 6 show the target and predicted values of FiO2 in
model the FiO2, the use of SaO2, FiO2 (old) and PEEP has testing set of the 3 cross-validation groups. In CV1, small
been suggested [22]. The variable RR is advised by clinician. deviations appear only when the amount of FiO2 becomes
There are a total of 408 data samples, divided into 3 higher or lower abruptly. In CV2 and CV3, the output of the
cross-validation groups to evaluate the performance of the proposed system is nearly perfect-match to the target setting
system. Within one cross-validation group, the first 60% data of FiO2.
is used as training set and the following 40% data is used as The membership functions and some sample rules are
testing set, shown in Fig. 3. extracted to show the interpretability of the proposed system.
The membership functions for the 4 input variables and 1
output variable are shown in Fig. 7 – 11. The overlap between
the fuzzy sets is low for all the variables. Each fuzzy set has a
clear semantic meaning.
Three samples fuzzy rules are shown in Fig 12. These rules
are the acquired knowledge from the data by the proposed
system. They can be understood by human user and used to
assist the clinicians.

TABLE I.
COMPARISON OF RMSE
RMSE
Model Average
CV1 CV2 CV3
Hebb-Rule-Reduct 2.085 0.753 0.536 1.125
POPFNN 13.776 6.031 2.375 7.394
RSPOP 13.841 6.031 2.166 7.346
Fig. 3. The FiO2 serious and the division of 3 cross-validation groups EFuNN 3.417 2.908 1.219 2.515
DENFIS 3.045 2.243 1.045 2.111
ANFIS 2.409 1.863 0.560 1.611

III. EXPERIMENTAL RESULTS AND ANALYSIS


TABLE II.
In this experiment, the Root Mean Squared Error (RMSE) COMPARISION OF THE NUMBER OF RULES
between the advised value of FiO2 by neuro-fuzzy hybrid Model
Number of Mandani-type rules
Average
systems and the setting of the clinician is used to measure the CV1 CV2 CV3
Hebb-Rule-Reduct 12 3 26 13.7
performance.. Some other neuro-fuzzy systems are employed POPFNN 48 28 53 43.0
for benchmark comparison. They are namely, EFUNN [23], RSPOP 29 9 11 16.3
POPFNN [24], RSPOP [25], DENFIS [26] and ANFIS [27]. EFuNN 32 57 109 66.0
The former 3 models are Mandani-type systems, while the
latter 2 are TSK models.
The experimental results are shown in Tables I and II.
Table I shows the comparison of RMSE between these
neuro-fuzzy models. In both the CV1 and CV2, the proposed
Hebb-Rule-Reduct system performs much better than other
systems. In CV3, the ANFIS is slightly worse than the
proposed system. The last column of Table I shows the
average RMSE of the 3 cross-validation groups. The
proposed system is the best among all of these neuro-fuzzy
systems.
Table II shows the comparison of the number of the
derived fuzzy rules. As the form of the TSK-style rule is
different from the Mandani-style rule, these two kinds of
rules are not comparable. Thus, the comparison is only made
among the Mandani systems. The number of derived rules
reflects the interpretability of the system. The more there are Fig. 4. Target and predicted values of FiO2 in CV1
the rules, the more complex and the more uninterpretable the
system is and vice versa. In Table II, the proposed
Hebb-Rule-Reduct system produces the least number of rules

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Fig. 9. MFs for PEEP

Fig. 5. Target and predicted values of FiO2 in CV2

Fig. 10. MFs for RR

Fig. 6. Target and predicted values of FiO2 in CV3

Fig. 11. MFs for FiO2

Rule 1: IF SaO2 is Normal(2) and FiO2 is Medium


and PEEP is High and RR is Medium,
THEN the new FiO2 is High.

Rule 2: IF SaO2 is Low and FiO2 is High and


PEEP is Medium and RR is High,
Fig. 7. MFs for SaO2
THEN the new FiO2 is High.

Rule 3: IF SaO2 is Normal(1) and FiO2 is High


and PEEP is Medium and RR is Low,
THEN the new FiO2 is Medium.

Fig. 12. Three sample fuzzy rule derived from the proposed system.

IV. CONCLUSION
In this paper, the setting of FiO2 in artificial ventilation is
Fig. 8. MFs for FiO2 (old) modeled by a neuro-fuzzy hybrid system. An iterative rule
reduction and tuning process is proposed to produce
interpretable fuzzy rules while still maintaining low modeling
error. Fuzzy sets are merged through their Hebbian
importance and the redundant rules and features are removed.

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